RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C TAF8Q03750 510 aa2.57□□□□□ -2
UBR1YGR184C YML082WQ04533 649 aaKnown RBP2.57□□□□□ -2
UBR1YGR184C YOR378WQ08902 515 aa2.57□□□□□ -2
UBR1YGR184C CMR1Q12510 522 aaKnown RBP2.57□□□□□ -2
UBR1YGR184C VMA3P25515 160 aa2.57□□□□□ -2
UBR1YGR184C RPL8BP29453 256 aaKnown RBP2.57□□□□□ -2
UBR1YGR184C MRF1P30775 413 aaPredicted RBP2.57□□□□□ -2
UBR1YGR184C MRS6P32864 603 aaKnown RBP2.57□□□□□ -2
UBR1YGR184C ULP1Q02724 621 aa2.57□□□□□ -2
UBR1YGR184C SYH1Q02875 849 aaKnown RBP2.57□□□□□ -2
UBR1YGR184C MTC5Q03897 1148 aa2.57□□□□□ -2
UBR1YGR184C DAL4Q04895 635 aa2.57□□□□□ -2
UBR1YGR184C KAP122P32767 1081 aa2.56□□□□□ -2
UBR1YGR184C FUI1P38196 639 aa2.56□□□□□ -2
UBR1YGR184C GIP1P38229 639 aa2.56□□□□□ -2
UBR1YGR184C ALA1P40825 983 aaKnown RBP2.56□□□□□ -2
UBR1YGR184C SKP1P52286 194 aa2.56□□□□□ -2
UBR1YGR184C YGR125WP53273 1036 aa2.56□□□□□ -2
UBR1YGR184C CAN1P04817 590 aa2.56□□□□□ -2
UBR1YGR184C RPL8AP17076 256 aaKnown RBP2.56□□□□□ -2
UBR1YGR184C FAA3P39002 694 aa2.56□□□□□ -2
UBR1YGR184C LEM3P42838 414 aa2.56□□□□□ -2
UBR1YGR184C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
UBR1YGR184C SUT1P53032 299 aaKnown RBP2.56□□□□□ -2
UBR1YGR184C CCP1P00431 361 aa2.56□□□□□ -2
UBR1YGR184C SSH4P32343 579 aa2.56□□□□□ -2
UBR1YGR184C MSN5P52918 1224 aa2.56□□□□□ -2
UBR1YGR184C TAN1P53072 289 aaPredicted RBP2.56□□□□□ -2
UBR1YGR184C KIP3P53086 805 aaKnown RBP2.56□□□□□ -2
UBR1YGR184C TY1A-DR4O74302 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-HP0C2I4 478 aaKnown RBP2.56□□□□□ -2
UBR1YGR184C TY1A-AP0CX57 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-PR1P0CX58 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-ORP0CX59 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-PR2P0CX60 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-DR5P0CX65 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-ER2P0CX66 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-GR3P0CX67 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-LR1P0CX68 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-MR2P0CX69 440 aa2.56□□□□□ -2
UBR1YGR184C KTR2P33550 425 aa2.56□□□□□ -2
UBR1YGR184C YKL133CP36066 463 aa2.56□□□□□ -2
UBR1YGR184C GDH3P39708 457 aa2.56□□□□□ -2
UBR1YGR184C SIT1P39980 628 aa2.56□□□□□ -2
UBR1YGR184C TY1A-JR2P47099 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-DR1Q03856 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-ML1Q04706 440 aaKnown RBP2.56□□□□□ -2
UBR1YGR184C ERF2Q06551 359 aa2.56□□□□□ -2
UBR1YGR184C MLC2Q06580 163 aa2.56□□□□□ -2
UBR1YGR184C TSR2Q06672 205 aaKnown RBP2.56□□□□□ -2
UBR1YGR184C TY1A-BRQ12217 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-NL2Q12470 440 aa2.56□□□□□ -2
UBR1YGR184C TY1A-GR2Q12485 440 aa2.56□□□□□ -2
UBR1YGR184C PGI1P12709 554 aaKnown RBP2.55□□□□□ -2
UBR1YGR184C PTP2P29461 750 aa2.55□□□□□ -2
UBR1YGR184C SPT16P32558 1035 aaKnown RBP2.55□□□□□ -2
UBR1YGR184C YBR071WP38243 211 aa2.55□□□□□ -2
UBR1YGR184C VTC4P47075 721 aa2.55□□□□□ -2
UBR1YGR184C YGR237CP50089 785 aa2.55□□□□□ -2
UBR1YGR184C FOX2Q02207 900 aaKnown RBP2.55□□□□□ -2
UBR1YGR184C SPA2P23201 1466 aaKnown RBP2.55□□□□□ -2
UBR1YGR184C MSN1P22148 382 aa2.55□□□□□ -2
UBR1YGR184C TRX2P22803 104 aaKnown RBP2.55□□□□□ -2
UBR1YGR184C EEB1Q02891 456 aa2.55□□□□□ -2
UBR1YGR184C RPC82P32349 654 aa2.55□□□□□ -2
UBR1YGR184C AIM46P38885 310 aa2.55□□□□□ -2
UBR1YGR184C HLJ1P48353 224 aa2.55□□□□□ -2
UBR1YGR184C YNL193WP53870 558 aa2.55□□□□□ -2
UBR1YGR184C NUP145P49687 1317 aa2.55□□□□□ -2
UBR1YGR184C MLF3P32047 452 aa2.55□□□□□ -2
UBR1YGR184C IRE1P32361 1115 aa2.55□□□□□ -2
UBR1YGR184C RGD1P38339 666 aa2.55□□□□□ -2
UBR1YGR184C MGS1P40151 587 aa2.55□□□□□ -2
UBR1YGR184C HOS4P40480 1083 aa2.55□□□□□ -2
UBR1YGR184C CNN1P43618 361 aa2.55□□□□□ -2
UBR1YGR184C TAF1P46677 1066 aa2.55□□□□□ -2
UBR1YGR184C TFB2Q02939 513 aa2.55□□□□□ -2
UBR1YGR184C UME1Q03010 460 aa2.55□□□□□ -2
UBR1YGR184C PML39Q03760 334 aa2.55□□□□□ -2
UBR1YGR184C SST2P11972 698 aaKnown RBP2.55□□□□□ -2
UBR1YGR184C RIM11P38615 370 aa2.55□□□□□ -2
UBR1YGR184C YER156CP40093 338 aaKnown RBP2.55□□□□□ -2
UBR1YGR184C RGD2P43556 714 aa2.55□□□□□ -2
UBR1YGR184C ADR1P07248 1323 aa2.54□□□□□ -2
UBR1YGR184C DAT1P13483 248 aaKnown RBP2.54□□□□□ -2
UBR1YGR184C YBL086CP38177 466 aa2.54□□□□□ -2
UBR1YGR184C PAC1P39946 494 aaKnown RBP2.54□□□□□ -2
UBR1YGR184C ULI1P43604 169 aa2.54□□□□□ -2
UBR1YGR184C GUS1P46655 708 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
UBR1YGR184C BUD20Q08004 166 aaPredicted RBP2.54□□□□□ -2
UBR1YGR184C VHS3Q08438 674 aa2.54□□□□□ -2
UBR1YGR184C REC8Q12188 680 aa2.54□□□□□ -2
UBR1YGR184C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.54□□□□□ -2 RIP-Chip
UBR1YGR184C LEU1P07264 779 aaKnown RBP2.54□□□□□ -2
UBR1YGR184C DOM34P33309 386 aa2.54□□□□□ -2
UBR1YGR184C RDH54P38086 958 aa2.54□□□□□ -2
UBR1YGR184C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
UBR1YGR184C ECM16Q04217 1267 aaKnown RBP2.54□□□□□ -2
UBR1YGR184C INP54Q08227 384 aaKnown RBP2.54□□□□□ -2
UBR1YGR184C RPC31P17890 251 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms