RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W RIM11P38615 370 aa5.86□□□□□ -1.47
PTI1YGR156W UTP22P53254 1237 aaPredicted RBP5.86□□□□□ -1.47
PTI1YGR156W CMR1Q12510 522 aaKnown RBP5.86□□□□□ -1.47
PTI1YGR156W REI1P38344 393 aaPredicted RBP5.85□□□□□ -1.47
PTI1YGR156W ACF4P47129 309 aa5.85□□□□□ -1.47
PTI1YGR156W PRP5P21372 849 aaPredicted RBP5.84□□□□□ -1.47
PTI1YGR156W ADP1P25371 1049 aa5.84□□□□□ -1.47
PTI1YGR156W ATG1P53104 897 aa5.84□□□□□ -1.47
PTI1YGR156W BSC2Q05611 235 aa5.84□□□□□ -1.47
PTI1YGR156W COBP00163 385 aa5.83□□□□□ -1.48
PTI1YGR156W ESC8Q08119 714 aa5.83□□□□□ -1.48
PTI1YGR156W MSH4P40965 878 aaPredicted RBP5.82□□□□□ -1.48
PTI1YGR156W OYE3P41816 400 aaPredicted RBP5.82□□□□□ -1.48
PTI1YGR156W MSH6Q03834 1242 aa5.82□□□□□ -1.48
PTI1YGR156W TRS120Q04183 1289 aa5.82□□□□□ -1.48
PTI1YGR156W PMT7Q06644 662 aa5.82□□□□□ -1.48
PTI1YGR156W AVO1Q08236 1176 aa5.82□□□□□ -1.48
PTI1YGR156W ALG6Q12001 544 aaKnown RBP5.82□□□□□ -1.48
PTI1YGR156W CDC55Q00362 526 aa5.81□□□□□ -1.48
PTI1YGR156W TRE1Q08919 783 aa5.81□□□□□ -1.48
PTI1YGR156W FLP1P03870 423 aa5.8□□□□□ -1.48
PTI1YGR156W DUR3P33413 735 aa5.8□□□□□ -1.48
PTI1YGR156W TAF1P46677 1066 aa5.8□□□□□ -1.48
PTI1YGR156W ALT1P52893 592 aa5.8□□□□□ -1.48
PTI1YGR156W CDA2Q06703 312 aa5.8□□□□□ -1.48
PTI1YGR156W NFS1P25374 497 aa5.79□□□□□ -1.48
PTI1YGR156W NNK1P36003 928 aa5.79□□□□□ -1.48
PTI1YGR156W YKL077WP36081 392 aa5.79□□□□□ -1.48
PTI1YGR156W ARL1P38116 183 aaKnown RBP5.79□□□□□ -1.48
PTI1YGR156W MCM5P29496 775 aaKnown RBP5.78□□□□□ -1.48
PTI1YGR156W GIP4P39732 760 aa5.78□□□□□ -1.48
PTI1YGR156W RVS167P39743 482 aaKnown RBP5.78□□□□□ -1.48
PTI1YGR156W NUT1P53114 1132 aa5.78□□□□□ -1.48
PTI1YGR156W ELA1P53861 379 aaPredicted RBP5.78□□□□□ -1.48
PTI1YGR156W SSY1Q03770 852 aa5.78□□□□□ -1.48
PTI1YGR156W SMY2P32909 740 aaKnown RBP5.77□□□□□ -1.49
PTI1YGR156W TSA1P34760 196 aaKnown RBP5.77□□□□□ -1.49
PTI1YGR156W SAP155P43612 1002 aa5.77□□□□□ -1.49
PTI1YGR156W YGR045CP53229 120 aa5.77□□□□□ -1.49
PTI1YGR156W YAF9P53930 226 aa5.77□□□□□ -1.49
PTI1YGR156W YVC1Q12324 675 aa5.77□□□□□ -1.49
PTI1YGR156W PRO1P32264 428 aa5.76□□□□□ -1.49
PTI1YGR156W SHU2P38957 223 aa5.76□□□□□ -1.49
PTI1YGR156W ORC3P54790 616 aa5.76□□□□□ -1.49
PTI1YGR156W INP54Q08227 384 aaKnown RBP5.76□□□□□ -1.49
PTI1YGR156W EAR1Q03212 550 aa5.75□□□□□ -1.49
PTI1YGR156W MNL2Q12205 849 aa5.75□□□□□ -1.49
PTI1YGR156W PEX7P39108 375 aa5.74□□□□□ -1.49
PTI1YGR156W SSA1P10591 642 aaKnown RBP5.73□□□□□ -1.49
PTI1YGR156W SAM37P50110 327 aa5.73□□□□□ -1.49
PTI1YGR156W NOC3Q07896 663 aaPredicted RBP5.73□□□□□ -1.49
PTI1YGR156W TRL1P09880 827 aaKnown RBP5.72□□□□□ -1.49
PTI1YGR156W GRS1P38088 690 aaKnown RBP5.72□□□□□ -1.49
PTI1YGR156W PTC7P38797 343 aa5.72□□□□□ -1.49
PTI1YGR156W MON1P53129 644 aa5.72□□□□□ -1.49
PTI1YGR156W CDC3P32457 520 aaKnown RBP5.71□□□□□ -1.5
PTI1YGR156W THI80P35202 319 aa5.71□□□□□ -1.5
PTI1YGR156W ATG14P38270 344 aa5.71□□□□□ -1.5
PTI1YGR156W TY1A-LR4P0C2I8 440 aaKnown RBP5.7□□□□□ -1.5
PTI1YGR156W TY1A-DR6P0CX70 440 aa5.7□□□□□ -1.5
PTI1YGR156W TY1A-ER1P0CX71 440 aa5.7□□□□□ -1.5
PTI1YGR156W TY1A-LR2P0CX72 440 aa5.7□□□□□ -1.5
PTI1YGR156W TY1A-PLP0CX73 440 aa5.7□□□□□ -1.5
PTI1YGR156W TY1A-JR1P0CX74 440 aa5.7□□□□□ -1.5
PTI1YGR156W TY1A-LR3P0CX75 440 aa5.7□□□□□ -1.5
PTI1YGR156W TY1A-ML2P0CX76 440 aa5.7□□□□□ -1.5
PTI1YGR156W GTS1P40956 396 aa5.7□□□□□ -1.5
PTI1YGR156W MTR4P47047 1073 aaKnown RBP5.7□□□□□ -1.5
PTI1YGR156W PUS7Q08647 676 aaKnown RBP5.7□□□□□ -1.5
PTI1YGR156W TY1A-GR1Q12085 440 aa5.7□□□□□ -1.5
PTI1YGR156W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.7□□□□□ -1.5
PTI1YGR156W TY1A-OLQ92392 440 aaKnown RBP5.7□□□□□ -1.5
PTI1YGR156W HSE1P38753 452 aa5.69□□□□□ -1.5
PTI1YGR156W FOL2P51601 243 aaKnown RBP5.69□□□□□ -1.5
PTI1YGR156W TPP1Q03796 238 aa5.69□□□□□ -1.5
PTI1YGR156W YCS4Q06156 1176 aa5.69□□□□□ -1.5
PTI1YGR156W LPX1Q12405 387 aaKnown RBP5.69□□□□□ -1.5
PTI1YGR156W AIM3P38266 947 aaKnown RBP5.68□□□□□ -1.5
PTI1YGR156W EXO5P38289 585 aa5.68□□□□□ -1.5
PTI1YGR156W CIC1P38779 376 aaKnown RBP5.68□□□□□ -1.5
PTI1YGR156W ERP5P38819 212 aa5.68□□□□□ -1.5
PTI1YGR156W YAR028WP39548 234 aa5.68□□□□□ -1.5
PTI1YGR156W SLS1P42900 643 aa5.68□□□□□ -1.5
PTI1YGR156W LAP2Q10740 671 aa5.68□□□□□ -1.5
PTI1YGR156W PRP6P19735 899 aaPredicted RBP5.67□□□□□ -1.5
PTI1YGR156W RET1P22276 1149 aaKnown RBP5.67□□□□□ -1.5
PTI1YGR156W FLR1P38124 548 aa5.67□□□□□ -1.5
PTI1YGR156W MDJ2P42834 146 aa5.67□□□□□ -1.5
PTI1YGR156W YBL113CQ7M4S9 792 aa5.67□□□□□ -1.5
PTI1YGR156W MRPL22P53881 309 aa5.66□□□□□ -1.5
PTI1YGR156W YHL012WP38709 493 aa5.65□□□□□ -1.5
PTI1YGR156W NOG1Q02892 647 aaKnown RBP5.65□□□□□ -1.5
PTI1YGR156W YLR257WQ06146 321 aaKnown RBP5.65□□□□□ -1.5
PTI1YGR156W NUT2Q06213 157 aa5.64□□□□□ -1.51
PTI1YGR156W GPI13Q07830 1017 aa5.64□□□□□ -1.51
PTI1YGR156W HRK1Q08732 759 aaKnown RBP5.64□□□□□ -1.51
PTI1YGR156W HAT1Q12341 374 aa5.64□□□□□ -1.51
PTI1YGR156W MDL2P33311 773 aa5.63□□□□□ -1.51
PTI1YGR156W ETP1P38748 585 aaKnown RBP5.63□□□□□ -1.51
PTI1YGR156W NEM1P38757 446 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms