RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W ZDS2P54786 942 aa8.14□□□□□ -1.11
MSP1YGR028W RAT1Q02792 1006 aaKnown RBP8.14□□□□□ -1.11
MSP1YGR028W NSE3Q05541 303 aa8.14□□□□□ -1.11
MSP1YGR028W OPT2Q06593 877 aa8.14□□□□□ -1.11
MSP1YGR028W BDF2Q07442 638 aa8.14□□□□□ -1.11
MSP1YGR028W SUB2Q07478 446 aaKnown RBP8.14□□□□□ -1.11
MSP1YGR028W SSP2Q08646 371 aa8.14□□□□□ -1.11
MSP1YGR028W PUP1P25043 261 aa8.13□□□□□ -1.11
MSP1YGR028W YNL050CP53952 270 aa8.13□□□□□ -1.11
MSP1YGR028W ECM23Q02710 187 aa8.13□□□□□ -1.11
MSP1YGR028W DLD1P32891 587 aa8.12□□□□□ -1.11
MSP1YGR028W VPS64Q03944 604 aa8.12□□□□□ -1.11
MSP1YGR028W PRD1P25375 712 aa8.11□□□□□ -1.11
MSP1YGR028W DAL1P32375 460 aa8.11□□□□□ -1.11
MSP1YGR028W ERO1Q03103 563 aa8.11□□□□□ -1.11
MSP1YGR028W COQ4O13525 335 aa8.1□□□□□ -1.11
MSP1YGR028W ZDS1P50111 915 aaKnown RBP8.1□□□□□ -1.11
MSP1YGR028W SCW11P53189 542 aa8.1□□□□□ -1.11
MSP1YGR028W THS1P04801 734 aaKnown RBP8.09□□□□□ -1.11
MSP1YGR028W CYT1P07143 309 aa8.09□□□□□ -1.11
MSP1YGR028W MCM1P11746 286 aa8.09□□□□□ -1.11
MSP1YGR028W VAN1P23642 535 aa8.09□□□□□ -1.11
MSP1YGR028W UTP7P40055 554 aaKnown RBP8.09□□□□□ -1.11
MSP1YGR028W THI22Q06490 572 aa8.09□□□□□ -1.11
MSP1YGR028W BMS1Q08965 1183 aaKnown RBP8.09□□□□□ -1.11
MSP1YGR028W YKU70P32807 602 aa8.08□□□□□ -1.12
MSP1YGR028W SSN3P39073 555 aa8.08□□□□□ -1.12
MSP1YGR028W ALA1P40825 983 aaKnown RBP8.08□□□□□ -1.12
MSP1YGR028W MPP10P47083 593 aaKnown RBP8.08□□□□□ -1.12
MSP1YGR028W ROM1P53046 1155 aa8.08□□□□□ -1.12
MSP1YGR028W PUF6Q04373 656 aaKnown RBP8.08□□□□□ -1.12
MSP1YGR028W NOB1Q08444 459 aaKnown RBP8.08□□□□□ -1.12
MSP1YGR028W FRD1P32614 470 aaKnown RBP8.07□□□□□ -1.12
MSP1YGR028W UBX7P38349 436 aa8.07□□□□□ -1.12
MSP1YGR028W YPQ2Q06328 317 aa8.07□□□□□ -1.12
MSP1YGR028W RTT109Q07794 436 aa8.07□□□□□ -1.12
MSP1YGR028W AHP1P38013 176 aaKnown RBP8.06□□□□□ -1.12
MSP1YGR028W SHC1P39000 512 aa8.06□□□□□ -1.12
MSP1YGR028W UBP16Q02863 499 aa8.06□□□□□ -1.12
MSP1YGR028W DIB1Q06819 143 aaPredicted RBP8.06□□□□□ -1.12
MSP1YGR028W TY1A-BLQ12266 440 aa8.06□□□□□ -1.12
MSP1YGR028W TRS33Q99394 268 aa8.06□□□□□ -1.12
MSP1YGR028W RET1P22276 1149 aaKnown RBP8.05□□□□□ -1.12
MSP1YGR028W GBP2P25555 427 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
MSP1YGR028W GAR1P28007 205 aaKnown RBP8.05□□□□□ -1.12
MSP1YGR028W MAM1P40065 302 aa8.05□□□□□ -1.12
MSP1YGR028W PKH1Q03407 766 aa8.05□□□□□ -1.12
MSP1YGR028W GRX6Q12438 231 aa8.05□□□□□ -1.12
MSP1YGR028W OSH7P38755 437 aa8.04□□□□□ -1.12
MSP1YGR028W FCP1Q03254 732 aa8.04□□□□□ -1.12
MSP1YGR028W HAT1Q12341 374 aa8.04□□□□□ -1.12
MSP1YGR028W LYS2P07702 1392 aa8.04□□□□□ -1.12
MSP1YGR028W UTP10P42945 1769 aaKnown RBP8.03□□□□□ -1.12
MSP1YGR028W NGR1P32831 672 aaKnown RBP8.03□□□□□ -1.12
MSP1YGR028W ACO2P39533 789 aa8.03□□□□□ -1.12
MSP1YGR028W SYF1Q04048 859 aaPredicted RBP8.03□□□□□ -1.12
MSP1YGR028W IOC4Q04213 475 aa8.03□□□□□ -1.12
MSP1YGR028W YDL144CQ07589 356 aa8.03□□□□□ -1.12
MSP1YGR028W GYP7P48365 746 aa8.02□□□□□ -1.13
MSP1YGR028W YOL057WQ08225 711 aa8.02□□□□□ -1.13
MSP1YGR028W PMD1P32634 1753 aa8.02□□□□□ -1.13
MSP1YGR028W TOM1Q03280 3268 aa8.01□□□□□ -1.13
MSP1YGR028W JJJ2P46997 583 aa8.01□□□□□ -1.13
MSP1YGR028W UBP15P50101 1230 aa8.01□□□□□ -1.13
MSP1YGR028W RPL34AP87262 121 aaPredicted RBP8.01□□□□□ -1.13
MSP1YGR028W YML083CQ04526 418 aa8.01□□□□□ -1.13
MSP1YGR028W YLR278CQ05854 1341 aa8.01□□□□□ -1.13
MSP1YGR028W CDC19P00549 500 aaKnown RBP8□□□□□ -1.13
MSP1YGR028W SLA1P32790 1244 aa8□□□□□ -1.13
MSP1YGR028W HEF3P53978 1044 aaKnown RBP8□□□□□ -1.13
MSP1YGR028W SWI1P09547 1314 aa8□□□□□ -1.13
MSP1YGR028W SSK22P25390 1331 aaPredicted RBP8□□□□□ -1.13
MSP1YGR028W IRE1P32361 1115 aa7.99□□□□□ -1.13
MSP1YGR028W FET4P40988 552 aa7.99□□□□□ -1.13
MSP1YGR028W SRT1Q03175 343 aa7.99□□□□□ -1.13
MSP1YGR028W RPS9BP05755 195 aaKnown RBP7.98□□□□□ -1.13
MSP1YGR028W MSM1P22438 575 aa7.98□□□□□ -1.13
MSP1YGR028W SCD5P34758 872 aa7.98□□□□□ -1.13
MSP1YGR028W NUP133P36161 1157 aa7.98□□□□□ -1.13
MSP1YGR028W DNM1P54861 757 aa7.98□□□□□ -1.13
MSP1YGR028W SRS2P12954 1174 aa7.97□□□□□ -1.13
MSP1YGR028W YTA6P40328 754 aa7.97□□□□□ -1.13
MSP1YGR028W VPS4P52917 437 aa7.97□□□□□ -1.13
MSP1YGR028W TRM44Q02648 567 aaKnown RBP7.97□□□□□ -1.13
MSP1YGR028W CWC15Q03772 175 aaKnown RBP7.97□□□□□ -1.13
MSP1YGR028W UTP4Q06679 776 aaKnown RBP7.97□□□□□ -1.13
MSP1YGR028W GAS5Q08193 484 aa7.97□□□□□ -1.13
MSP1YGR028W YGR122WP53272 402 aa7.96□□□□□ -1.14
MSP1YGR028W YDR306CQ06640 478 aa7.96□□□□□ -1.14
MSP1YGR028W PUN1Q06991 263 aa7.96□□□□□ -1.14
MSP1YGR028W MRP7P12687 371 aa7.95□□□□□ -1.14
MSP1YGR028W GEF1P37020 779 aa7.95□□□□□ -1.14
MSP1YGR028W STV1P37296 890 aa7.95□□□□□ -1.14
MSP1YGR028W GSM1P42950 618 aa7.95□□□□□ -1.14
MSP1YGR028W TY1A-MR1Q04215 440 aa7.95□□□□□ -1.14
MSP1YGR028W TY1A-DR3Q12441 440 aa7.95□□□□□ -1.14
MSP1YGR028W KRE2P27809 442 aa7.94□□□□□ -1.14
MSP1YGR028W SWC3P31376 625 aa7.94□□□□□ -1.14
MSP1YGR028W AFG2P32794 780 aa7.94□□□□□ -1.14
MSP1YGR028W ROG3P43602 733 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms