RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C PEA2P40091 420 aa6.61□□□□□ -1.35
RPT6YGL048C YPP1P46951 817 aa6.61□□□□□ -1.35
RPT6YGL048C DUS1P53759 423 aaKnown RBP6.61□□□□□ -1.35
RPT6YGL048C TOS4Q06266 489 aa6.61□□□□□ -1.35
RPT6YGL048C POM152P39685 1337 aa6.6□□□□□ -1.35
RPT6YGL048C BOI2P39969 1040 aa6.6□□□□□ -1.35
RPT6YGL048C PRP42Q03776 544 aaKnown RBP6.6□□□□□ -1.35
RPT6YGL048C CSI1Q04368 295 aa6.6□□□□□ -1.35
RPT6YGL048C CRF1Q04930 467 aa6.6□□□□□ -1.35
RPT6YGL048C RPS19AP07280 144 aaKnown RBP6.59□□□□□ -1.35
RPT6YGL048C RPS19BP07281 144 aaPredicted RBP6.59□□□□□ -1.35
RPT6YGL048C HPR1P17629 752 aaKnown RBP6.59□□□□□ -1.35
RPT6YGL048C UTP7P40055 554 aaKnown RBP6.59□□□□□ -1.35
RPT6YGL048C GSM1P42950 618 aa6.59□□□□□ -1.35
RPT6YGL048C CWC22P53333 577 aaKnown RBP6.59□□□□□ -1.35
RPT6YGL048C IRC4Q03036 179 aa6.59□□□□□ -1.35
RPT6YGL048C CDC45Q08032 650 aa6.59□□□□□ -1.35
RPT6YGL048C HIF1Q12373 385 aa6.59□□□□□ -1.35
RPT6YGL048C HKR1P41809 1802 aa6.59□□□□□ -1.35
RPT6YGL048C ADR1P07248 1323 aa6.58□□□□□ -1.36
RPT6YGL048C SLX8P40072 274 aa6.58□□□□□ -1.36
RPT6YGL048C MTC3P53077 123 aa6.58□□□□□ -1.36
RPT6YGL048C SRC1Q03707 834 aa6.58□□□□□ -1.36
RPT6YGL048C CWC15Q03772 175 aaKnown RBP6.58□□□□□ -1.36
RPT6YGL048C HED1Q03937 162 aa6.58□□□□□ -1.36
RPT6YGL048C NOP8Q08287 484 aaPredicted RBP6.58□□□□□ -1.36
RPT6YGL048C RVB2Q12464 471 aaKnown RBP6.58□□□□□ -1.36
RPT6YGL048C FAS2P19097 1887 aaKnown RBP6.58□□□□□ -1.36
RPT6YGL048C ARG82P07250 355 aa6.57□□□□□ -1.36
RPT6YGL048C ATG36P46983 293 aa6.57□□□□□ -1.36
RPT6YGL048C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
RPT6YGL048C WRS1Q12109 432 aaKnown RBP6.57□□□□□ -1.36
RPT6YGL048C SNU66Q12420 587 aaPredicted RBP6.57□□□□□ -1.36
RPT6YGL048C SUP35P05453 685 aaKnown RBP6.56□□□□□ -1.36
RPT6YGL048C PNT1P38969 423 aa6.56□□□□□ -1.36
RPT6YGL048C YIL092WP40497 633 aa6.56□□□□□ -1.36
RPT6YGL048C SYH1Q02875 849 aaKnown RBP6.56□□□□□ -1.36
RPT6YGL048C TFB3Q03290 321 aa6.56□□□□□ -1.36
RPT6YGL048C CBP1P07252 654 aa6.55□□□□□ -1.36
RPT6YGL048C HVG1P0CE11 249 aa6.55□□□□□ -1.36
RPT6YGL048C RPS7AP26786 190 aaKnown RBP6.55□□□□□ -1.36
RPT6YGL048C GLO3P38682 493 aaKnown RBP6.55□□□□□ -1.36
RPT6YGL048C SEC18P18759 758 aaKnown RBP6.54□□□□□ -1.36
RPT6YGL048C YBL036CP38197 257 aa6.54□□□□□ -1.36
RPT6YGL048C MAK16P10962 306 aaPredicted RBP6.53□□□□□ -1.36
RPT6YGL048C KIP2P28743 706 aa6.53□□□□□ -1.36
RPT6YGL048C TOA1P32773 286 aa6.53□□□□□ -1.36
RPT6YGL048C RPT3P33298 428 aaKnown RBP6.53□□□□□ -1.36
RPT6YGL048C HAL5P38970 855 aaKnown RBP6.53□□□□□ -1.36
RPT6YGL048C YFH7P43591 353 aa6.53□□□□□ -1.36
RPT6YGL048C JJJ2P46997 583 aa6.53□□□□□ -1.36
RPT6YGL048C TPO2P53283 614 aa6.53□□□□□ -1.36
RPT6YGL048C ACK1Q07622 623 aaPredicted RBP6.53□□□□□ -1.36
RPT6YGL048C PSF3Q12146 194 aa6.53□□□□□ -1.36
RPT6YGL048C CDC4P07834 779 aa6.52□□□□□ -1.37
RPT6YGL048C NAF1P53919 492 aaKnown RBP6.52□□□□□ -1.37
RPT6YGL048C CSR2Q12734 1121 aa6.52□□□□□ -1.37
RPT6YGL048C SNF3P10870 884 aa6.51□□□□□ -1.37
RPT6YGL048C DAL5P15365 543 aa6.51□□□□□ -1.37
RPT6YGL048C SPT5P27692 1063 aaKnown RBP6.51□□□□□ -1.37
RPT6YGL048C GCD7P32502 381 aaPredicted RBP6.51□□□□□ -1.37
RPT6YGL048C SLA1P32790 1244 aa6.51□□□□□ -1.37
RPT6YGL048C IXR1P33417 597 aa6.51□□□□□ -1.37
RPT6YGL048C OSW7P43611 510 aa6.51□□□□□ -1.37
RPT6YGL048C RRT6P53117 311 aaPredicted RBP6.51□□□□□ -1.37
RPT6YGL048C SEN54Q02825 467 aaPredicted RBP6.51□□□□□ -1.37
RPT6YGL048C SRF1Q12516 437 aa6.51□□□□□ -1.37
RPT6YGL048C TIF6Q12522 245 aaKnown RBP6.51□□□□□ -1.37
RPT6YGL048C MOT2P34909 587 aaKnown RBP6.5□□□□□ -1.37
RPT6YGL048C BSD2P38356 321 aa6.5□□□□□ -1.37
RPT6YGL048C NIT1P40447 199 aa6.5□□□□□ -1.37
RPT6YGL048C VAC17P25591 423 aa6.49□□□□□ -1.37
RPT6YGL048C PRS1P32895 427 aaKnown RBP6.49□□□□□ -1.37
RPT6YGL048C SSF1P38789 453 aaPredicted RBP6.49□□□□□ -1.37
RPT6YGL048C YNG2P38806 282 aaKnown RBP6.49□□□□□ -1.37
RPT6YGL048C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
RPT6YGL048C YNL193WP53870 558 aa6.49□□□□□ -1.37
RPT6YGL048C RPN7Q06103 429 aaKnown RBP6.49□□□□□ -1.37
RPT6YGL048C KEL1P38853 1164 aaKnown RBP6.48□□□□□ -1.37
RPT6YGL048C YIR042CP40586 236 aa6.48□□□□□ -1.37
RPT6YGL048C NSG2P53898 299 aa6.48□□□□□ -1.37
RPT6YGL048C FAR11P53917 953 aa6.48□□□□□ -1.37
RPT6YGL048C INM2Q05533 292 aa6.48□□□□□ -1.37
RPT6YGL048C TEC1P18412 486 aa6.47□□□□□ -1.37
RPT6YGL048C RAD53P22216 821 aa6.47□□□□□ -1.37
RPT6YGL048C PTK1P36002 662 aaPredicted RBP6.47□□□□□ -1.37
RPT6YGL048C SPC42P36094 363 aa6.47□□□□□ -1.37
RPT6YGL048C APE3P37302 537 aaKnown RBP6.47□□□□□ -1.37
RPT6YGL048C KTR3P38130 404 aaPredicted RBP6.47□□□□□ -1.37
RPT6YGL048C APL6P46682 809 aa6.47□□□□□ -1.37
RPT6YGL048C CLA4P48562 842 aa6.47□□□□□ -1.37
RPT6YGL048C SPO1P53541 631 aa6.47□□□□□ -1.37
RPT6YGL048C PIF1P07271 859 aa6.46□□□□□ -1.38
RPT6YGL048C RAD2P07276 1031 aa6.46□□□□□ -1.38
RPT6YGL048C GAL2P13181 574 aa6.46□□□□□ -1.38
RPT6YGL048C PKC1P24583 1151 aa6.46□□□□□ -1.38
RPT6YGL048C GEF1P37020 779 aa6.46□□□□□ -1.38
RPT6YGL048C AIR1P40507 360 aaKnown RBP6.46□□□□□ -1.38
RPT6YGL048C FIG4P42837 879 aa6.46□□□□□ -1.38
RPT6YGL048C NCS6P53088 359 aa6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms