RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W YGL140CP53120 1219 aa5.69□□□□□ -1.5
CDC4YFL009W SNU71P53207 620 aaKnown RBP5.69□□□□□ -1.5
CDC4YFL009W HRQ1Q05549 1077 aa5.69□□□□□ -1.5
CDC4YFL009W APC11Q12157 165 aa5.69□□□□□ -1.5
CDC4YFL009W UBP1P25037 809 aa5.69□□□□□ -1.5
CDC4YFL009W IML1P47170 1584 aa5.69□□□□□ -1.5
CDC4YFL009W TIM50Q02776 476 aa5.69□□□□□ -1.5
CDC4YFL009W SIR4P11978 1358 aa5.69□□□□□ -1.5
CDC4YFL009W RAD50P12753 1312 aa5.68□□□□□ -1.5
CDC4YFL009W KAR2P16474 682 aaKnown RBP5.68□□□□□ -1.5
CDC4YFL009W KTR2P33550 425 aa5.68□□□□□ -1.5
CDC4YFL009W PPX1P38698 397 aa5.68□□□□□ -1.5
CDC4YFL009W ALD4P46367 519 aaKnown RBP5.68□□□□□ -1.5
CDC4YFL009W PAP2P53632 584 aaKnown RBP5.68□□□□□ -1.5
CDC4YFL009W YMR102CQ03177 834 aa5.68□□□□□ -1.5
CDC4YFL009W YSH1Q06224 779 aaPredicted RBP5.68□□□□□ -1.5
CDC4YFL009W PUS1Q12211 544 aaKnown RBP5.68□□□□□ -1.5
CDC4YFL009W RPA190P10964 1664 aaKnown RBP5.68□□□□□ -1.5
CDC4YFL009W BIK1P11709 440 aa5.68□□□□□ -1.5
CDC4YFL009W DID4P36108 232 aa5.68□□□□□ -1.5
CDC4YFL009W RFC1P38630 861 aaKnown RBP5.68□□□□□ -1.5
CDC4YFL009W HXT13P39924 564 aa5.68□□□□□ -1.5
CDC4YFL009W PXR1P53335 271 aaPredicted RBP5.68□□□□□ -1.5
CDC4YFL009W ERV41Q04651 352 aa5.68□□□□□ -1.5
CDC4YFL009W NUT2Q06213 157 aa5.68□□□□□ -1.5
CDC4YFL009W PUN1Q06991 263 aa5.68□□□□□ -1.5
CDC4YFL009W STB3Q12427 513 aa5.68□□□□□ -1.5
CDC4YFL009W SPT16P32558 1035 aaKnown RBP5.67□□□□□ -1.5
CDC4YFL009W MRPL10P36520 322 aa5.67□□□□□ -1.5
CDC4YFL009W CWH41P53008 833 aa5.67□□□□□ -1.5
CDC4YFL009W ATG20Q07528 640 aa5.67□□□□□ -1.5
CDC4YFL009W SEC20P28791 383 aa5.66□□□□□ -1.5
CDC4YFL009W MNR2P35724 969 aa5.66□□□□□ -1.5
CDC4YFL009W VPS41P38959 992 aa5.66□□□□□ -1.5
CDC4YFL009W EMW1P42842 904 aaKnown RBP5.66□□□□□ -1.5
CDC4YFL009W MDM38Q08179 573 aa5.66□□□□□ -1.5
CDC4YFL009W MET4P32389 672 aa5.66□□□□□ -1.5
CDC4YFL009W QDR1P40475 563 aa5.66□□□□□ -1.5
CDC4YFL009W HXT17P53631 564 aa5.66□□□□□ -1.5
CDC4YFL009W SSL2Q00578 843 aa5.66□□□□□ -1.5
CDC4YFL009W NTH2P35172 780 aa5.65□□□□□ -1.5
CDC4YFL009W APP1P53933 587 aa5.65□□□□□ -1.5
CDC4YFL009W PUS5Q06244 254 aa5.65□□□□□ -1.5
CDC4YFL009W GPI13Q07830 1017 aa5.65□□□□□ -1.5
CDC4YFL009W LSO1Q3E827 93 aa5.65□□□□□ -1.5
CDC4YFL009W KAR3P17119 729 aa5.65□□□□□ -1.51
CDC4YFL009W NDC80P40460 691 aa5.65□□□□□ -1.51
CDC4YFL009W PAT1P25644 796 aaKnown RBP5.64□□□□□ -1.51
CDC4YFL009W HIM1Q06674 414 aa5.64□□□□□ -1.51
CDC4YFL009W SEC7P11075 2009 aaKnown RBP5.64□□□□□ -1.51
CDC4YFL009W SWI5P08153 709 aa5.64□□□□□ -1.51
CDC4YFL009W RNR2P09938 399 aaKnown RBP5.64□□□□□ -1.51
CDC4YFL009W PET123P17558 318 aa5.64□□□□□ -1.51
CDC4YFL009W CHL1P22516 861 aaPredicted RBP5.64□□□□□ -1.51
CDC4YFL009W VAN1P23642 535 aa5.64□□□□□ -1.51
CDC4YFL009W NGR1P32831 672 aaKnown RBP5.64□□□□□ -1.51
CDC4YFL009W RPS0AP32905 252 aaKnown RBP5.64□□□□□ -1.51
CDC4YFL009W CST6P40535 587 aa5.64□□□□□ -1.51
CDC4YFL009W BDP1P46678 594 aa5.64□□□□□ -1.51
CDC4YFL009W CAB1Q04430 367 aa5.64□□□□□ -1.51
CDC4YFL009W SES1P07284 462 aaKnown RBP5.63□□□□□ -1.51
CDC4YFL009W ARD1P07347 238 aaPredicted RBP5.63□□□□□ -1.51
CDC4YFL009W GLO3P38682 493 aaKnown RBP5.63□□□□□ -1.51
CDC4YFL009W ACF4P47129 309 aa5.63□□□□□ -1.51
CDC4YFL009W GRX3Q03835 250 aa5.63□□□□□ -1.51
CDC4YFL009W MNL2Q12205 849 aa5.63□□□□□ -1.51
CDC4YFL009W LYS2P07702 1392 aa5.63□□□□□ -1.51
CDC4YFL009W RPS6AP0CX37 236 aaKnown RBP5.63□□□□□ -1.51
CDC4YFL009W RPS6BP0CX38 236 aaPredicted RBP5.63□□□□□ -1.51
CDC4YFL009W GDT1P38301 280 aaPredicted RBP5.63□□□□□ -1.51
CDC4YFL009W PRP31P49704 494 aaPredicted RBP5.63□□□□□ -1.51
CDC4YFL009W SPO1P53541 631 aa5.63□□□□□ -1.51
CDC4YFL009W SAS4Q04003 481 aa5.63□□□□□ -1.51
CDC4YFL009W FUR4P05316 633 aaKnown RBP5.62□□□□□ -1.51
CDC4YFL009W HSP104P31539 908 aaKnown RBP5.62□□□□□ -1.51
CDC4YFL009W YBR197CP38306 217 aa5.62□□□□□ -1.51
CDC4YFL009W YNG2P38806 282 aaKnown RBP5.62□□□□□ -1.51
CDC4YFL009W YMR124WP39523 943 aaKnown RBP5.62□□□□□ -1.51
CDC4YFL009W ISU1Q03020 165 aa5.62□□□□□ -1.51
CDC4YFL009W GIN4Q12263 1142 aa5.62□□□□□ -1.51
CDC4YFL009W BMT6Q12291 365 aa5.62□□□□□ -1.51
CDC4YFL009W CYT1P07143 309 aa5.61□□□□□ -1.51
CDC4YFL009W ELM1P32801 640 aa5.61□□□□□ -1.51
CDC4YFL009W YGL082WP53155 381 aa5.61□□□□□ -1.51
CDC4YFL009W PEX19Q07418 342 aa5.61□□□□□ -1.51
CDC4YFL009W TLG2Q08144 397 aa5.61□□□□□ -1.51
CDC4YFL009W APL5Q08951 932 aaKnown RBP5.61□□□□□ -1.51
CDC4YFL009W YKL068W-AQ3E826 78 aa5.61□□□□□ -1.51
CDC4YFL009W TRS33Q99394 268 aa5.61□□□□□ -1.51
CDC4YFL009W FBP26P32604 452 aa5.6□□□□□ -1.51
CDC4YFL009W CCT5P40413 562 aaKnown RBP5.6□□□□□ -1.51
CDC4YFL009W HOS4P40480 1083 aa5.6□□□□□ -1.51
CDC4YFL009W YFL034WP43564 1073 aa5.6□□□□□ -1.51
CDC4YFL009W YJR107WP47145 328 aa5.6□□□□□ -1.51
CDC4YFL009W YPQ2Q06328 317 aa5.6□□□□□ -1.51
CDC4YFL009W DNF3Q12674 1656 aa5.6□□□□□ -1.51
CDC4YFL009W RPB10P22139 70 aa5.6□□□□□ -1.51
CDC4YFL009W SEC14P24280 304 aaKnown RBP5.6□□□□□ -1.51
CDC4YFL009W HXT5P38695 592 aa5.6□□□□□ -1.51
CDC4YFL009W ORM2Q06144 216 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms