RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W UBX5Q06682 500 aa8.25□□□□□ -1.09
PDA1YER178W NDT80P38830 627 aa8.24□□□□□ -1.09
PDA1YER178W VPS8P39702 1274 aa8.24□□□□□ -1.09
PDA1YER178W ERG7P38604 731 aa8.23□□□□□ -1.09
PDA1YER178W NET1P47035 1189 aa8.23□□□□□ -1.09
PDA1YER178W SRF1Q12516 437 aa8.23□□□□□ -1.09
PDA1YER178W MAK31P23059 88 aa8.22□□□□□ -1.09
PDA1YER178W UBP9P39967 754 aa8.22□□□□□ -1.09
PDA1YER178W VID28P40547 921 aa8.22□□□□□ -1.09
PDA1YER178W CTR1P49573 406 aa8.22□□□□□ -1.09
PDA1YER178W FOL1P53848 824 aa8.22□□□□□ -1.09
PDA1YER178W VPS30Q02948 557 aa8.22□□□□□ -1.09
PDA1YER178W YOR111WQ99210 232 aa8.22□□□□□ -1.09
PDA1YER178W FKS1P38631 1876 aaKnown RBP8.21□□□□□ -1.09
PDA1YER178W ERG12P07277 443 aa8.21□□□□□ -1.1
PDA1YER178W NUC1P08466 329 aa8.21□□□□□ -1.1
PDA1YER178W AKR1P39010 764 aa8.21□□□□□ -1.1
PDA1YER178W RPT6Q01939 405 aaKnown RBP8.21□□□□□ -1.1
PDA1YER178W TMA64Q04600 565 aaKnown RBP8.21□□□□□ -1.1
PDA1YER178W CFT2Q12102 859 aaPredicted RBP8.21□□□□□ -1.1
PDA1YER178W VPS13Q07878 3144 aa8.2□□□□□ -1.1
PDA1YER178W PHR1P05066 565 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
PDA1YER178W TGL1P34163 548 aa8.2□□□□□ -1.1
PDA1YER178W PHO88P38264 188 aaPredicted RBP8.2□□□□□ -1.1
PDA1YER178W LYS14P40971 790 aa8.2□□□□□ -1.1
PDA1YER178W NCS6P53088 359 aa8.2□□□□□ -1.1
PDA1YER178W YLR225CQ05948 407 aaKnown RBP8.2□□□□□ -1.1
PDA1YER178W SAM1P10659 382 aaKnown RBP8.19□□□□□ -1.1
PDA1YER178W RAD18P10862 487 aa8.19□□□□□ -1.1
PDA1YER178W FBP26P32604 452 aa8.19□□□□□ -1.1
PDA1YER178W SHP1P34223 423 aa8.19□□□□□ -1.1
PDA1YER178W RSC30P38781 883 aa8.19□□□□□ -1.1
PDA1YER178W SPR3P41901 512 aa8.19□□□□□ -1.1
PDA1YER178W EPL1P43572 832 aa8.19□□□□□ -1.1
PDA1YER178W SGD1Q06132 899 aa8.19□□□□□ -1.1
PDA1YER178W EST2Q06163 884 aa8.19□□□□□ -1.1
PDA1YER178W SUB2Q07478 446 aaKnown RBP8.19□□□□□ -1.1
PDA1YER178W PER1P25625 357 aa8.18□□□□□ -1.1
PDA1YER178W CDC60P26637 1090 aaKnown RBP8.18□□□□□ -1.1
PDA1YER178W RPL8BP29453 256 aaKnown RBP8.18□□□□□ -1.1
PDA1YER178W MCD4P36051 919 aa8.18□□□□□ -1.1
PDA1YER178W UTR4P32626 227 aa8.17□□□□□ -1.1
PDA1YER178W VAB2P40003 282 aa8.17□□□□□ -1.1
PDA1YER178W SOL4P53315 255 aa8.17□□□□□ -1.1
PDA1YER178W MDM1Q01846 1127 aa8.17□□□□□ -1.1
PDA1YER178W DUS4Q06063 367 aa8.17□□□□□ -1.1
PDA1YER178W ESF1Q06344 628 aaKnown RBP8.17□□□□□ -1.1
PDA1YER178W UTP4Q06679 776 aaKnown RBP8.17□□□□□ -1.1
PDA1YER178W DSE3Q08729 430 aa8.17□□□□□ -1.1
PDA1YER178W SRS2P12954 1174 aa8.16□□□□□ -1.1
PDA1YER178W MOT1P32333 1867 aa8.16□□□□□ -1.1
PDA1YER178W EUG1P32474 517 aa8.16□□□□□ -1.1
PDA1YER178W YGL015CP33199 130 aa8.16□□□□□ -1.1
PDA1YER178W SPO22P40511 975 aa8.16□□□□□ -1.1
PDA1YER178W SCS3P53012 380 aa8.16□□□□□ -1.1
PDA1YER178W ALD6P54115 500 aaKnown RBP8.16□□□□□ -1.1
PDA1YER178W DUS3Q06053 668 aaKnown RBP8.16□□□□□ -1.1
PDA1YER178W RNR3P21672 869 aaKnown RBP8.15□□□□□ -1.1
PDA1YER178W SWI4P25302 1093 aaKnown RBP8.15□□□□□ -1.1
PDA1YER178W VPS45P38932 577 aa8.15□□□□□ -1.1
PDA1YER178W KRI1P42846 591 aaKnown RBP8.15□□□□□ -1.1
PDA1YER178W ASE1P50275 885 aa8.15□□□□□ -1.1
PDA1YER178W YLR326WQ06170 240 aaKnown RBP8.15□□□□□ -1.1
PDA1YER178W YDR461C-AQ2V2P7 80 aa8.15□□□□□ -1.1
PDA1YER178W MET6P05694 767 aaKnown RBP8.14□□□□□ -1.11
PDA1YER178W MATALPHA2P0CY08 210 aa8.14□□□□□ -1.11
PDA1YER178W HMLALPHA2P0CY09 210 aa8.14□□□□□ -1.11
PDA1YER178W STI1P15705 589 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
PDA1YER178W VMA2P16140 517 aaKnown RBP8.14□□□□□ -1.11
PDA1YER178W VPS1P21576 704 aaKnown RBP8.14□□□□□ -1.11
PDA1YER178W PAM1P37304 830 aaKnown RBP8.14□□□□□ -1.11
PDA1YER178W YGL039WP53183 348 aaKnown RBP8.14□□□□□ -1.11
PDA1YER178W YLR407WQ06070 228 aa8.14□□□□□ -1.11
PDA1YER178W SPH1Q06160 661 aa8.14□□□□□ -1.11
PDA1YER178W RLF2Q12495 606 aa8.14□□□□□ -1.11
PDA1YER178W DIT2P21595 489 aa8.13□□□□□ -1.11
PDA1YER178W PKC1P24583 1151 aa8.13□□□□□ -1.11
PDA1YER178W CDC27P38042 758 aa8.13□□□□□ -1.11
PDA1YER178W PCI8P40512 444 aa8.13□□□□□ -1.11
PDA1YER178W NPA3P47122 385 aa8.13□□□□□ -1.11
PDA1YER178W CTF18P49956 741 aa8.13□□□□□ -1.11
PDA1YER178W PIB1Q06651 286 aa8.13□□□□□ -1.11
PDA1YER178W CDC6P09119 513 aa8.12□□□□□ -1.11
PDA1YER178W TPM1P17536 199 aaKnown RBP8.12□□□□□ -1.11
PDA1YER178W HCA4P20448 770 aaKnown RBP8.12□□□□□ -1.11
PDA1YER178W UGA4P32837 571 aa8.12□□□□□ -1.11
PDA1YER178W BCS1P32839 456 aa8.12□□□□□ -1.11
PDA1YER178W RPN10P38886 268 aaKnown RBP8.12□□□□□ -1.11
PDA1YER178W ENT3P47160 408 aa8.12□□□□□ -1.11
PDA1YER178W CSC1Q06538 782 aa8.12□□□□□ -1.11
PDA1YER178W ERP3Q12403 225 aa8.12□□□□□ -1.11
PDA1YER178W RNR2P09938 399 aaKnown RBP8.11□□□□□ -1.11
PDA1YER178W YUR1P26725 428 aa8.11□□□□□ -1.11
PDA1YER178W DBP7P36120 742 aaKnown RBP8.11□□□□□ -1.11
PDA1YER178W RXT2P38255 430 aa8.11□□□□□ -1.11
PDA1YER178W PAN5P38787 379 aa8.11□□□□□ -1.11
PDA1YER178W GPB2P39717 880 aa8.11□□□□□ -1.11
PDA1YER178W AFG3P39925 761 aa8.11□□□□□ -1.11
PDA1YER178W FMS1P50264 508 aa8.11□□□□□ -1.11
PDA1YER178W BRE5P53741 515 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms