RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W PRP5P21372 849 aaPredicted RBP6.15□□□□□ -1.42
PRE1YER012W MCM5P29496 775 aaKnown RBP6.15□□□□□ -1.42
PRE1YER012W TY1A-LR4P0C2I8 440 aaKnown RBP6.14□□□□□ -1.43
PRE1YER012W TY1A-DR6P0CX70 440 aa6.14□□□□□ -1.43
PRE1YER012W TY1A-ER1P0CX71 440 aa6.14□□□□□ -1.43
PRE1YER012W TY1A-LR2P0CX72 440 aa6.14□□□□□ -1.43
PRE1YER012W TY1A-PLP0CX73 440 aa6.14□□□□□ -1.43
PRE1YER012W TY1A-JR1P0CX74 440 aa6.14□□□□□ -1.43
PRE1YER012W TY1A-LR3P0CX75 440 aa6.14□□□□□ -1.43
PRE1YER012W TY1A-ML2P0CX76 440 aa6.14□□□□□ -1.43
PRE1YER012W UTP22P53254 1237 aaPredicted RBP6.14□□□□□ -1.43
PRE1YER012W TY1A-GR1Q12085 440 aa6.14□□□□□ -1.43
PRE1YER012W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.14□□□□□ -1.43
PRE1YER012W TY1A-OLQ92392 440 aaKnown RBP6.14□□□□□ -1.43
PRE1YER012W YHL050CP38721 697 aa6.13□□□□□ -1.43
PRE1YER012W YHR219WP38900 624 aa6.13□□□□□ -1.43
PRE1YER012W MMM1P41800 426 aa6.13□□□□□ -1.43
PRE1YER012W GCV1P48015 400 aa6.13□□□□□ -1.43
PRE1YER012W YAF9P53930 226 aa6.13□□□□□ -1.43
PRE1YER012W EAR1Q03212 550 aa6.13□□□□□ -1.43
PRE1YER012W REI1P38344 393 aaPredicted RBP6.12□□□□□ -1.43
PRE1YER012W MEC3Q02574 474 aa6.12□□□□□ -1.43
PRE1YER012W NOC3Q07896 663 aaPredicted RBP6.12□□□□□ -1.43
PRE1YER012W SAP155P43612 1002 aa6.11□□□□□ -1.43
PRE1YER012W ELA1P53861 379 aaPredicted RBP6.11□□□□□ -1.43
PRE1YER012W PMT7Q06644 662 aa6.11□□□□□ -1.43
PRE1YER012W MSH4P40965 878 aaPredicted RBP6.1□□□□□ -1.43
PRE1YER012W YLL054CQ12244 843 aa6.1□□□□□ -1.43
PRE1YER012W RPS4AP0CX35 261 aaKnown RBP6.09□□□□□ -1.43
PRE1YER012W RPS4BP0CX36 261 aaKnown RBP6.09□□□□□ -1.43
PRE1YER012W UGA4P32837 571 aa6.09□□□□□ -1.43
PRE1YER012W LRG1P35688 1017 aa6.09□□□□□ -1.43
PRE1YER012W SLS1P42900 643 aa6.09□□□□□ -1.43
PRE1YER012W CIT3P43635 486 aa6.09□□□□□ -1.43
PRE1YER012W RCM1P53972 490 aa6.09□□□□□ -1.43
PRE1YER012W IRC24P40580 263 aa6.08□□□□□ -1.44
PRE1YER012W YGR045CP53229 120 aa6.08□□□□□ -1.44
PRE1YER012W NMD3P38861 518 aaKnown RBP6.07□□□□□ -1.44
PRE1YER012W RVS167P39743 482 aaKnown RBP6.07□□□□□ -1.44
PRE1YER012W POL12P38121 705 aaPredicted RBP6.06□□□□□ -1.44
PRE1YER012W EXO5P38289 585 aa6.06□□□□□ -1.44
PRE1YER012W SAM37P50110 327 aa6.06□□□□□ -1.44
PRE1YER012W TOS4Q06266 489 aa6.06□□□□□ -1.44
PRE1YER012W RNQ1P25367 405 aa6.05□□□□□ -1.44
PRE1YER012W NFS1P25374 497 aa6.05□□□□□ -1.44
PRE1YER012W SEG2P34250 1132 aa6.05□□□□□ -1.44
PRE1YER012W SSF1P38789 453 aaPredicted RBP6.05□□□□□ -1.44
PRE1YER012W OYE3P41816 400 aaPredicted RBP6.05□□□□□ -1.44
PRE1YER012W YCS4Q06156 1176 aa6.05□□□□□ -1.44
PRE1YER012W AVO1Q08236 1176 aa6.05□□□□□ -1.44
PRE1YER012W YKL077WP36081 392 aa6.04□□□□□ -1.44
PRE1YER012W NEM1P38757 446 aa6.04□□□□□ -1.44
PRE1YER012W ALT1P52893 592 aa6.04□□□□□ -1.44
PRE1YER012W PEX13P80667 386 aa6.04□□□□□ -1.44
PRE1YER012W CIC1P38779 376 aaKnown RBP6.03□□□□□ -1.44
PRE1YER012W NSI1Q12457 570 aa6.03□□□□□ -1.44
PRE1YER012W PHO4P07270 312 aaKnown RBP6.02□□□□□ -1.45
PRE1YER012W MET4P32389 672 aa6.02□□□□□ -1.45
PRE1YER012W PRP40P33203 583 aaKnown RBP6.02□□□□□ -1.45
PRE1YER012W THI12P42883 340 aa6.02□□□□□ -1.45
PRE1YER012W THI5P43534 340 aa6.02□□□□□ -1.45
PRE1YER012W THI11P47183 340 aa6.02□□□□□ -1.45
PRE1YER012W DAL4Q04895 635 aa6.02□□□□□ -1.45
PRE1YER012W THI13Q07748 340 aa6.02□□□□□ -1.45
PRE1YER012W WHI5Q12416 295 aa6.02□□□□□ -1.45
PRE1YER012W DFG16Q99234 619 aa6.02□□□□□ -1.45
PRE1YER012W MSH3P25336 1018 aa6.01□□□□□ -1.45
PRE1YER012W HSP78P33416 811 aa6.01□□□□□ -1.45
PRE1YER012W YNR063WP53749 607 aa6.01□□□□□ -1.45
PRE1YER012W SSY1Q03770 852 aa6.01□□□□□ -1.45
PRE1YER012W YVC1Q12324 675 aa6.01□□□□□ -1.45
PRE1YER012W SMY2P32909 740 aaKnown RBP6□□□□□ -1.45
PRE1YER012W DAK2P43550 591 aa6□□□□□ -1.45
PRE1YER012W YOR059CQ08448 450 aaKnown RBP6□□□□□ -1.45
PRE1YER012W PRO1P32264 428 aa5.99□□□□□ -1.45
PRE1YER012W RSM26P47141 266 aa5.99□□□□□ -1.45
PRE1YER012W ULP1Q02724 621 aa5.99□□□□□ -1.45
PRE1YER012W TRE1Q08919 783 aa5.99□□□□□ -1.45
PRE1YER012W ELM1P32801 640 aa5.98□□□□□ -1.45
PRE1YER012W PEX7P39108 375 aa5.98□□□□□ -1.45
PRE1YER012W NOG1Q02892 647 aaKnown RBP5.98□□□□□ -1.45
PRE1YER012W TPP1Q03796 238 aa5.98□□□□□ -1.45
PRE1YER012W AOS1Q06624 347 aa5.98□□□□□ -1.45
PRE1YER012W PTC7P38797 343 aa5.97□□□□□ -1.45
PRE1YER012W SHU2P38957 223 aa5.97□□□□□ -1.45
PRE1YER012W IPL1P38991 367 aa5.97□□□□□ -1.45
PRE1YER012W YAR028WP39548 234 aa5.97□□□□□ -1.45
PRE1YER012W XKS1P42826 600 aa5.97□□□□□ -1.45
PRE1YER012W UTP5Q04177 643 aaKnown RBP5.97□□□□□ -1.45
PRE1YER012W PUS7Q08647 676 aaKnown RBP5.97□□□□□ -1.45
PRE1YER012W MSC6Q08818 692 aaKnown RBP5.97□□□□□ -1.45
PRE1YER012W GAS1P22146 559 aaKnown RBP5.96□□□□□ -1.46
PRE1YER012W ADP1P25371 1049 aa5.96□□□□□ -1.46
PRE1YER012W NNK1P36003 928 aa5.96□□□□□ -1.46
PRE1YER012W ARL1P38116 183 aaKnown RBP5.96□□□□□ -1.46
PRE1YER012W FAA3P39002 694 aa5.96□□□□□ -1.46
PRE1YER012W GTS1P40956 396 aa5.96□□□□□ -1.46
PRE1YER012W RET1P22276 1149 aaKnown RBP5.95□□□□□ -1.46
PRE1YER012W GCD6P32501 712 aaKnown RBP5.95□□□□□ -1.46
PRE1YER012W VPS35P34110 944 aa5.95□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms