RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W EXO5P38289 585 aa3.88□□□□□ -1.79
SNX41YDR425W TOS4Q06266 489 aa3.88□□□□□ -1.79
SNX41YDR425W YLR122CQ12312 125 aa3.88□□□□□ -1.79
SNX41YDR425W TY1A-LR4P0C2I8 440 aaKnown RBP3.88□□□□□ -1.79
SNX41YDR425W TY1A-DR6P0CX70 440 aa3.88□□□□□ -1.79
SNX41YDR425W TY1A-ER1P0CX71 440 aa3.88□□□□□ -1.79
SNX41YDR425W TY1A-LR2P0CX72 440 aa3.88□□□□□ -1.79
SNX41YDR425W TY1A-PLP0CX73 440 aa3.88□□□□□ -1.79
SNX41YDR425W TY1A-JR1P0CX74 440 aa3.88□□□□□ -1.79
SNX41YDR425W TY1A-LR3P0CX75 440 aa3.88□□□□□ -1.79
SNX41YDR425W TY1A-ML2P0CX76 440 aa3.88□□□□□ -1.79
SNX41YDR425W RRP15Q06511 250 aaPredicted RBP3.88□□□□□ -1.79
SNX41YDR425W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SNX41YDR425W TY1A-GR1Q12085 440 aa3.88□□□□□ -1.79
SNX41YDR425W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.88□□□□□ -1.79
SNX41YDR425W TY1A-OLQ92392 440 aaKnown RBP3.88□□□□□ -1.79
SNX41YDR425W KAR2P16474 682 aaKnown RBP3.87□□□□□ -1.79
SNX41YDR425W COQ2P32378 372 aa3.87□□□□□ -1.79
SNX41YDR425W SHU2P38957 223 aa3.87□□□□□ -1.79
SNX41YDR425W THI12P42883 340 aa3.87□□□□□ -1.79
SNX41YDR425W THI5P43534 340 aa3.87□□□□□ -1.79
SNX41YDR425W THI11P47183 340 aa3.87□□□□□ -1.79
SNX41YDR425W THI13Q07748 340 aa3.87□□□□□ -1.79
SNX41YDR425W OXR1Q08952 273 aa3.87□□□□□ -1.79
SNX41YDR425W HXK1P04806 485 aaKnown RBP3.86□□□□□ -1.79
SNX41YDR425W HEM3P28789 327 aa3.86□□□□□ -1.79
SNX41YDR425W NAM7P30771 971 aaKnown RBP3.86□□□□□ -1.79
SNX41YDR425W KAE1P36132 386 aa3.86□□□□□ -1.79
SNX41YDR425W ULP1Q02724 621 aa3.86□□□□□ -1.79
SNX41YDR425W YPL109CQ02981 657 aa3.86□□□□□ -1.79
SNX41YDR425W DAL4Q04895 635 aa3.86□□□□□ -1.79
SNX41YDR425W SBP1P10080 294 aaKnown RBP3.86□□□□□ -1.79
SNX41YDR425W CHS2P14180 963 aa3.86□□□□□ -1.79
SNX41YDR425W UGA4P32837 571 aa3.86□□□□□ -1.79
SNX41YDR425W RPT1P33299 467 aaKnown RBP3.86□□□□□ -1.79
SNX41YDR425W REI1P38344 393 aaPredicted RBP3.86□□□□□ -1.79
SNX41YDR425W AKR1P39010 764 aa3.86□□□□□ -1.79
SNX41YDR425W YMR074CQ04773 145 aa3.86□□□□□ -1.79
SNX41YDR425W ATE1P16639 503 aa3.85□□□□□ -1.79
SNX41YDR425W YKL077WP36081 392 aa3.85□□□□□ -1.79
SNX41YDR425W RDH54P38086 958 aa3.85□□□□□ -1.79
SNX41YDR425W NEM1P38757 446 aa3.85□□□□□ -1.79
SNX41YDR425W FAA3P39002 694 aa3.85□□□□□ -1.79
SNX41YDR425W YJR107WP47145 328 aa3.85□□□□□ -1.79
SNX41YDR425W ADI1Q03677 179 aa3.85□□□□□ -1.79
SNX41YDR425W DOT1Q04089 582 aaKnown RBP3.85□□□□□ -1.79
SNX41YDR425W GIC2Q06648 383 aa3.85□□□□□ -1.79
SNX41YDR425W VMA4P22203 233 aaKnown RBP3.84□□□□□ -1.79
SNX41YDR425W MSH3P25336 1018 aa3.84□□□□□ -1.79
SNX41YDR425W SPO74P45819 413 aa3.84□□□□□ -1.79
SNX41YDR425W INP52P50942 1183 aa3.84□□□□□ -1.79
SNX41YDR425W YGR122WP53272 402 aa3.84□□□□□ -1.79
SNX41YDR425W NRD1P53617 575 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
SNX41YDR425W MSB1P21339 1137 aaKnown RBP3.84□□□□□ -1.8
SNX41YDR425W GPT2P36148 743 aa3.84□□□□□ -1.8
SNX41YDR425W SLS1P42900 643 aa3.84□□□□□ -1.8
SNX41YDR425W POL32P47110 350 aa3.84□□□□□ -1.8
SNX41YDR425W ALT1P52893 592 aa3.84□□□□□ -1.8
SNX41YDR425W MED7Q08278 222 aa3.84□□□□□ -1.8
SNX41YDR425W TRP3P00937 484 aa3.83□□□□□ -1.8
SNX41YDR425W YKR073CP36153 106 aa3.83□□□□□ -1.8
SNX41YDR425W MSH4P40965 878 aaPredicted RBP3.83□□□□□ -1.8
SNX41YDR425W YGR045CP53229 120 aa3.83□□□□□ -1.8
SNX41YDR425W UTP5Q04177 643 aaKnown RBP3.83□□□□□ -1.8
SNX41YDR425W HEM13P11353 328 aaKnown RBP3.82□□□□□ -1.8
SNX41YDR425W SEC23P15303 768 aaKnown RBP3.82□□□□□ -1.8
SNX41YDR425W ASF1P32447 279 aa3.82□□□□□ -1.8
SNX41YDR425W MGE1P38523 228 aa3.82□□□□□ -1.8
SNX41YDR425W PEX28P38848 579 aa3.82□□□□□ -1.8
SNX41YDR425W MTR4P47047 1073 aaKnown RBP3.82□□□□□ -1.8
SNX41YDR425W YGL140CP53120 1219 aa3.82□□□□□ -1.8
SNX41YDR425W ALG6Q12001 544 aaKnown RBP3.82□□□□□ -1.8
SNX41YDR425W TAF13P11747 167 aa3.81□□□□□ -1.8
SNX41YDR425W SMY2P32909 740 aaKnown RBP3.81□□□□□ -1.8
SNX41YDR425W PIC2P40035 300 aa3.81□□□□□ -1.8
SNX41YDR425W MMM1P41800 426 aa3.81□□□□□ -1.8
SNX41YDR425W RSM26P47141 266 aa3.81□□□□□ -1.8
SNX41YDR425W YGR130CP53278 816 aa3.81□□□□□ -1.8
SNX41YDR425W ALO1P54783 526 aaKnown RBP3.81□□□□□ -1.8
SNX41YDR425W MCD1Q12158 566 aa3.81□□□□□ -1.8
SNX41YDR425W CYC8P14922 966 aa3.81□□□□□ -1.8
SNX41YDR425W PRE9P23638 258 aaKnown RBP3.81□□□□□ -1.8
SNX41YDR425W SQT1P35184 431 aa3.81□□□□□ -1.8
SNX41YDR425W NNK1P36003 928 aa3.81□□□□□ -1.8
SNX41YDR425W PEX13P80667 386 aa3.81□□□□□ -1.8
SNX41YDR425W RKM2Q03942 479 aa3.81□□□□□ -1.8
SNX41YDR425W YOR059CQ08448 450 aaKnown RBP3.81□□□□□ -1.8
SNX41YDR425W RAD2P07276 1031 aa3.8□□□□□ -1.8
SNX41YDR425W RPS4AP0CX35 261 aaKnown RBP3.8□□□□□ -1.8
SNX41YDR425W RPS4BP0CX36 261 aaKnown RBP3.8□□□□□ -1.8
SNX41YDR425W PUB1P32588 453 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SNX41YDR425W CIT3P43635 486 aa3.8□□□□□ -1.8
SNX41YDR425W ELA1P53861 379 aaPredicted RBP3.8□□□□□ -1.8
SNX41YDR425W AVO1Q08236 1176 aa3.8□□□□□ -1.8
SNX41YDR425W CYC7P00045 113 aa3.79□□□□□ -1.8
SNX41YDR425W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SNX41YDR425W TOS1P38288 455 aa3.79□□□□□ -1.8
SNX41YDR425W YAR028WP39548 234 aa3.79□□□□□ -1.8
SNX41YDR425W XKS1P42826 600 aa3.79□□□□□ -1.8
SNX41YDR425W MRPS18P42847 217 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms