RNA–Protein interactions for RNA: YDR422C

SIP1, Transcript of Alternate beta-subunit of the Snf1p kinase complex, yeast

Gene SIP1, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	YDR422C	PIP2	P52960	996 aa		4.85	□□□□□ -1.63
SIP1	YDR422C	ALO1	P54783	526 aa	Known RBP	4.85	□□□□□ -1.63
SIP1	YDR422C	CIA1	Q05583	330 aa		4.85	□□□□□ -1.63
SIP1	YDR422C	FAL1	Q12099	399 aa	Known RBP	4.85	□□□□□ -1.63
SIP1	YDR422C	HBS1	P32769	611 aa	Known RBP	4.84	□□□□□ -1.63
SIP1	YDR422C	XDJ1	P39102	459 aa		4.84	□□□□□ -1.63
SIP1	YDR422C	PEA2	P40091	420 aa		4.84	□□□□□ -1.63
SIP1	YDR422C	MGS1	P40151	587 aa		4.84	□□□□□ -1.63
SIP1	YDR422C	HXT8	P40886	569 aa		4.84	□□□□□ -1.63
SIP1	YDR422C	MRPS18	P42847	217 aa		4.84	□□□□□ -1.63
SIP1	YDR422C	HXT10	P43581	546 aa		4.84	□□□□□ -1.63
SIP1	YDR422C	ESF2	P53743	316 aa	Known RBP	4.84	□□□□□ -1.63
SIP1	YDR422C	MET14	Q02196	202 aa		4.84	□□□□□ -1.63
SIP1	YDR422C	ADI1	Q03677	179 aa		4.84	□□□□□ -1.63
SIP1	YDR422C	ATG20	Q07528	640 aa		4.84	□□□□□ -1.63
SIP1	YDR422C	ALR1	Q08269	859 aa		4.84	□□□□□ -1.63
SIP1	YDR422C	TMA7	Q3E764	64 aa	Known RBP	4.84	□□□□□ -1.63
SIP1	YDR422C	TRP2	P00899	507 aa	Known RBP	4.84	□□□□□ -1.64
SIP1	YDR422C	SPT2	P06843	333 aa	Predicted RBP	4.84	□□□□□ -1.64
SIP1	YDR422C	SBP1	P10080	294 aa	Known RBP	4.84	□□□□□ -1.64
SIP1	YDR422C	MSN1	P22148	382 aa		4.84	□□□□□ -1.64
SIP1	YDR422C	AGP1	P25376	633 aa		4.84	□□□□□ -1.64
SIP1	YDR422C	GDH3	P39708	457 aa		4.84	□□□□□ -1.64
SIP1	YDR422C	UME1	Q03010	460 aa		4.84	□□□□□ -1.64
SIP1	YDR422C	UGO1	Q03327	502 aa		4.84	□□□□□ -1.64
SIP1	YDR422C	PSR1	Q07800	427 aa		4.84	□□□□□ -1.64
SIP1	YDR422C	RTT10	Q08924	1013 aa		4.84	□□□□□ -1.64
SIP1	YDR422C	MDM12	Q92328	271 aa		4.84	□□□□□ -1.64
SIP1	YDR422C	TFC4	P33339	1025 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	HSP78	P33416	811 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	RRD1	P40454	393 aa	Known RBP	4.83	□□□□□ -1.64
SIP1	YDR422C	RSC8	P43609	557 aa	Known RBP	4.83	□□□□□ -1.64
SIP1	YDR422C	UTP8	P53276	713 aa	Known RBP	4.83	□□□□□ -1.64
SIP1	YDR422C	PEX29	Q03370	554 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	SHE9	Q04172	456 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	YCS4	Q06156	1176 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	HDA2	Q06629	674 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	PSK2	Q08217	1101 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	FOB1	O13329	566 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	RER2	P35196	286 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	NTA1	P40354	457 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	DAS1	P47005	663 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	MDM1	Q01846	1127 aa		4.83	□□□□□ -1.64
SIP1	YDR422C	MTC2	P34246	357 aa		4.82	□□□□□ -1.64
SIP1	YDR422C	CIC1	P38779	376 aa	Known RBP	4.82	□□□□□ -1.64
SIP1	YDR422C	CCC2	P38995	1004 aa		4.82	□□□□□ -1.64
SIP1	YDR422C	OXR1	Q08952	273 aa		4.82	□□□□□ -1.64
SIP1	YDR422C	RPP1B	P10622	106 aa	Known RBP	4.82	□□□□□ -1.64
SIP1	YDR422C	HSC82	P15108	705 aa	Known RBP	4.82	□□□□□ -1.64
SIP1	YDR422C	HSP60	P19882	572 aa	Known RBP	4.82	□□□□□ -1.64
SIP1	YDR422C	IRR1	P40541	1150 aa		4.82	□□□□□ -1.64
SIP1	YDR422C	YFL034W	P43564	1073 aa		4.82	□□□□□ -1.64
SIP1	YDR422C	KRE33	P53914	1056 aa	Known RBP	4.82	□□□□□ -1.64
SIP1	YDR422C	PML39	Q03760	334 aa		4.82	□□□□□ -1.64
SIP1	YDR422C	YLR225C	Q05948	407 aa	Known RBP	4.82	□□□□□ -1.64
SIP1	YDR422C	TRK1	P12685	1235 aa		4.81	□□□□□ -1.64
SIP1	YDR422C	KCC4	P25389	1037 aa		4.81	□□□□□ -1.64
SIP1	YDR422C	ECM32	P32644	1121 aa	Known RBP	4.81	□□□□□ -1.64
SIP1	YDR422C	MFT1	P33441	392 aa	Known RBP	4.81	□□□□□ -1.64
SIP1	YDR422C	HSV2	P50079	448 aa	Predicted RBP	4.81	□□□□□ -1.64
SIP1	YDR422C	PEX14	P53112	341 aa		4.81	□□□□□ -1.64
SIP1	YDR422C	GRX3	Q03835	250 aa		4.81	□□□□□ -1.64
SIP1	YDR422C	DAL3	P32459	195 aa		4.81	□□□□□ -1.64
SIP1	YDR422C	RDH54	P38086	958 aa		4.81	□□□□□ -1.64
SIP1	YDR422C	KTR4	P38131	464 aa		4.81	□□□□□ -1.64
SIP1	YDR422C	PES4	P39684	611 aa		4.81	□□□□□ -1.64
SIP1	YDR422C	PSY2	P40164	858 aa		4.81	□□□□□ -1.64
SIP1	YDR422C	PEX6	P33760	1030 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	YHL041W	P38730	149 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	GPP2	P40106	250 aa	Known RBP	4.8	□□□□□ -1.64
SIP1	YDR422C	XKS1	P42826	600 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	SAP155	P43612	1002 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	NPY1	P53164	384 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SIP1	YDR422C	YML131W	Q03102	365 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	MTQ2	Q03920	221 aa	Predicted RBP	4.8	□□□□□ -1.64
SIP1	YDR422C	EAF1	Q06337	982 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	RPS31	P05759	152 aa	Known RBP	4.8	□□□□□ -1.64
SIP1	YDR422C	MSS18	P08593	268 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	NDE1	P40215	560 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	NUT1	P53114	1132 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	ISU1	Q03020	165 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	MSH6	Q03834	1242 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	MSB4	Q12317	492 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	HBN1	Q96VH4	193 aa		4.8	□□□□□ -1.64
SIP1	YDR422C	MNN4	P36044	1178 aa		4.79	□□□□□ -1.64
SIP1	YDR422C	RAD55	P38953	406 aa		4.79	□□□□□ -1.64
SIP1	YDR422C	PCL2	P25693	308 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	DBF20	P32328	564 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	RPS0A	P32905	252 aa	Known RBP	4.78	□□□□□ -1.64
SIP1	YDR422C	YGL015C	P33199	130 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	BSD2	P38356	321 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	GGA2	P38817	585 aa	Known RBP	4.78	□□□□□ -1.64
SIP1	YDR422C	YAP1801	P38856	637 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	ESL1	P40456	1118 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	ERR3	P42222	437 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	PMT3	P47190	753 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	CWH41	P53008	833 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	MON1	P53129	644 aa		4.78	□□□□□ -1.64
SIP1	YDR422C	BUL2	Q03758	920 aa	Known RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms