RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W GIC2Q06648 383 aa4.56□□□□□ -1.68
SSF2YDR312W MSB1P21339 1137 aaKnown RBP4.55□□□□□ -1.68
SSF2YDR312W MCM5P29496 775 aaKnown RBP4.55□□□□□ -1.68
SSF2YDR312W TOS1P38288 455 aa4.55□□□□□ -1.68
SSF2YDR312W CIC1P38779 376 aaKnown RBP4.55□□□□□ -1.68
SSF2YDR312W IPL1P38991 367 aa4.55□□□□□ -1.68
SSF2YDR312W RVS167P39743 482 aaKnown RBP4.55□□□□□ -1.68
SSF2YDR312W SPO74P45819 413 aa4.55□□□□□ -1.68
SSF2YDR312W MON1P53129 644 aa4.55□□□□□ -1.68
SSF2YDR312W MEC3Q02574 474 aa4.55□□□□□ -1.68
SSF2YDR312W MSC6Q08818 692 aaKnown RBP4.55□□□□□ -1.68
SSF2YDR312W SLD2P34252 453 aa4.54□□□□□ -1.68
SSF2YDR312W GPT2P36148 743 aa4.54□□□□□ -1.68
SSF2YDR312W PPX1P38698 397 aa4.54□□□□□ -1.68
SSF2YDR312W DOT1Q04089 582 aaKnown RBP4.54□□□□□ -1.68
SSF2YDR312W YCS4Q06156 1176 aa4.54□□□□□ -1.68
SSF2YDR312W CYC7P00045 113 aa4.53□□□□□ -1.68
SSF2YDR312W PUB1P32588 453 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
SSF2YDR312W PHO4P07270 312 aaKnown RBP4.53□□□□□ -1.69
SSF2YDR312W REI1P38344 393 aaPredicted RBP4.53□□□□□ -1.69
SSF2YDR312W CTH1P47976 325 aa4.53□□□□□ -1.69
SSF2YDR312W WHI5Q12416 295 aa4.53□□□□□ -1.69
SSF2YDR312W TY1A-LR4P0C2I8 440 aaKnown RBP4.52□□□□□ -1.69
SSF2YDR312W TY1A-DR6P0CX70 440 aa4.52□□□□□ -1.69
SSF2YDR312W TY1A-ER1P0CX71 440 aa4.52□□□□□ -1.69
SSF2YDR312W TY1A-LR2P0CX72 440 aa4.52□□□□□ -1.69
SSF2YDR312W TY1A-PLP0CX73 440 aa4.52□□□□□ -1.69
SSF2YDR312W TY1A-JR1P0CX74 440 aa4.52□□□□□ -1.69
SSF2YDR312W TY1A-LR3P0CX75 440 aa4.52□□□□□ -1.69
SSF2YDR312W TY1A-ML2P0CX76 440 aa4.52□□□□□ -1.69
SSF2YDR312W MET4P32389 672 aa4.52□□□□□ -1.69
SSF2YDR312W GCD6P32501 712 aaKnown RBP4.52□□□□□ -1.69
SSF2YDR312W LIP5P32875 414 aa4.52□□□□□ -1.69
SSF2YDR312W VPS35P34110 944 aa4.52□□□□□ -1.69
SSF2YDR312W ARL1P38116 183 aaKnown RBP4.52□□□□□ -1.69
SSF2YDR312W MMM1P41800 426 aa4.52□□□□□ -1.69
SSF2YDR312W MAG2Q06436 670 aaKnown RBP4.52□□□□□ -1.69
SSF2YDR312W BRE4Q07660 1125 aa4.52□□□□□ -1.69
SSF2YDR312W ALG6Q12001 544 aaKnown RBP4.52□□□□□ -1.69
SSF2YDR312W TY1A-GR1Q12085 440 aa4.52□□□□□ -1.69
SSF2YDR312W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.52□□□□□ -1.69
SSF2YDR312W TY1A-OLQ92392 440 aaKnown RBP4.52□□□□□ -1.69
SSF2YDR312W SEC20P28791 383 aa4.51□□□□□ -1.69
SSF2YDR312W YKL077WP36081 392 aa4.51□□□□□ -1.69
SSF2YDR312W SHU2P38957 223 aa4.51□□□□□ -1.69
SSF2YDR312W WHI3P34761 661 aaKnown RBP4.5□□□□□ -1.69
SSF2YDR312W EXO5P38289 585 aa4.5□□□□□ -1.69
SSF2YDR312W THI12P42883 340 aa4.5□□□□□ -1.69
SSF2YDR312W THI5P43534 340 aa4.5□□□□□ -1.69
SSF2YDR312W CIT3P43635 486 aa4.5□□□□□ -1.69
SSF2YDR312W THI11P47183 340 aa4.5□□□□□ -1.69
SSF2YDR312W NOG1Q02892 647 aaKnown RBP4.5□□□□□ -1.69
SSF2YDR312W THI13Q07748 340 aa4.5□□□□□ -1.69
SSF2YDR312W RPS4AP0CX35 261 aaKnown RBP4.49□□□□□ -1.69
SSF2YDR312W RPS4BP0CX36 261 aaKnown RBP4.49□□□□□ -1.69
SSF2YDR312W PRP40P33203 583 aaKnown RBP4.49□□□□□ -1.69
SSF2YDR312W MSH4P40965 878 aaPredicted RBP4.49□□□□□ -1.69
SSF2YDR312W DAK2P43550 591 aa4.49□□□□□ -1.69
SSF2YDR312W YGR045CP53229 120 aa4.49□□□□□ -1.69
SSF2YDR312W DAL4Q04895 635 aa4.49□□□□□ -1.69
SSF2YDR312W YOR059CQ08448 450 aaKnown RBP4.49□□□□□ -1.69
SSF2YDR312W GCD1P09032 578 aaPredicted RBP4.48□□□□□ -1.69
SSF2YDR312W KAR2P16474 682 aaKnown RBP4.48□□□□□ -1.69
SSF2YDR312W SLS1P42900 643 aa4.48□□□□□ -1.69
SSF2YDR312W ALT1P52893 592 aa4.48□□□□□ -1.69
SSF2YDR312W ELA1P53861 379 aaPredicted RBP4.48□□□□□ -1.69
SSF2YDR312W AVO1Q08236 1176 aa4.48□□□□□ -1.69
SSF2YDR312W UGA4P32837 571 aa4.47□□□□□ -1.69
SSF2YDR312W NEM1P38757 446 aa4.47□□□□□ -1.69
SSF2YDR312W RCM1P53972 490 aa4.47□□□□□ -1.69
SSF2YDR312W ULP1Q02724 621 aa4.47□□□□□ -1.69
SSF2YDR312W OXR1Q08952 273 aa4.47□□□□□ -1.69
SSF2YDR312W NSI1Q12457 570 aa4.47□□□□□ -1.69
SSF2YDR312W MSH3P25336 1018 aa4.46□□□□□ -1.7
SSF2YDR312W HEM3P28789 327 aa4.46□□□□□ -1.7
SSF2YDR312W SMY2P32909 740 aaKnown RBP4.46□□□□□ -1.7
SSF2YDR312W MTR4P47047 1073 aaKnown RBP4.46□□□□□ -1.7
SSF2YDR312W PEX13P80667 386 aa4.46□□□□□ -1.7
SSF2YDR312W SDH1Q00711 640 aa4.46□□□□□ -1.7
SSF2YDR312W TOS4Q06266 489 aa4.46□□□□□ -1.7
SSF2YDR312W ATE1P16639 503 aa4.45□□□□□ -1.7
SSF2YDR312W NFS1P25374 497 aa4.45□□□□□ -1.7
SSF2YDR312W NNK1P36003 928 aa4.45□□□□□ -1.7
SSF2YDR312W SEA4P38164 1038 aa4.45□□□□□ -1.7
SSF2YDR312W OYE3P41816 400 aaPredicted RBP4.45□□□□□ -1.7
SSF2YDR312W RSM26P47141 266 aa4.45□□□□□ -1.7
SSF2YDR312W EAR1Q03212 550 aa4.45□□□□□ -1.7
SSF2YDR312W SQT1P35184 431 aa4.44□□□□□ -1.7
SSF2YDR312W POL32P47110 350 aa4.44□□□□□ -1.7
SSF2YDR312W UTP5Q04177 643 aaKnown RBP4.44□□□□□ -1.7
SSF2YDR312W YVC1Q12324 675 aa4.44□□□□□ -1.7
SSF2YDR312W VMA4P22203 233 aaKnown RBP4.43□□□□□ -1.7
SSF2YDR312W RPT1P33299 467 aaKnown RBP4.43□□□□□ -1.7
SSF2YDR312W PEX28P38848 579 aa4.43□□□□□ -1.7
SSF2YDR312W YAR028WP39548 234 aa4.43□□□□□ -1.7
SSF2YDR312W AVT1P47082 602 aa4.43□□□□□ -1.7
SSF2YDR312W YPL109CQ02981 657 aa4.43□□□□□ -1.7
SSF2YDR312W ADI1Q03677 179 aa4.43□□□□□ -1.7
SSF2YDR312W RRP15Q06511 250 aaPredicted RBP4.43□□□□□ -1.7
SSF2YDR312W DNA2P38859 1522 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms