RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W CMR1Q12510 522 aaKnown RBP2.14□□□□□ -2.07
BFR2YDR299W PRO1P32264 428 aa2.13□□□□□ -2.07
BFR2YDR299W RIM11P38615 370 aa2.13□□□□□ -2.07
BFR2YDR299W QDR1P40475 563 aa2.13□□□□□ -2.07
BFR2YDR299W TAF1P46677 1066 aa2.13□□□□□ -2.07
BFR2YDR299W MEC3Q02574 474 aa2.13□□□□□ -2.07
BFR2YDR299W SSY1Q03770 852 aa2.13□□□□□ -2.07
BFR2YDR299W MSH6Q03834 1242 aa2.13□□□□□ -2.07
BFR2YDR299W BSC2Q05611 235 aa2.13□□□□□ -2.07
BFR2YDR299W CDA2Q06703 312 aa2.13□□□□□ -2.07
BFR2YDR299W ESC8Q08119 714 aa2.13□□□□□ -2.07
BFR2YDR299W AVO1Q08236 1176 aa2.13□□□□□ -2.07
BFR2YDR299W TRE1Q08919 783 aa2.13□□□□□ -2.07
BFR2YDR299W NFS1P25374 497 aa2.13□□□□□ -2.07
BFR2YDR299W ALT1P52893 592 aa2.13□□□□□ -2.07
BFR2YDR299W ELA1P53861 379 aaPredicted RBP2.13□□□□□ -2.07
BFR2YDR299W EAR1Q03212 550 aa2.13□□□□□ -2.07
BFR2YDR299W SUB2Q07478 446 aaKnown RBP2.13□□□□□ -2.07
BFR2YDR299W SMY2P32909 740 aaKnown RBP2.12□□□□□ -2.07
BFR2YDR299W DUR3P33413 735 aa2.12□□□□□ -2.07
BFR2YDR299W PTC7P38797 343 aa2.12□□□□□ -2.07
BFR2YDR299W GIP4P39732 760 aa2.12□□□□□ -2.07
BFR2YDR299W RSC4Q02206 625 aa2.12□□□□□ -2.07
BFR2YDR299W YVC1Q12324 675 aa2.12□□□□□ -2.07
BFR2YDR299W MCM5P29496 775 aaKnown RBP2.11□□□□□ -2.07
BFR2YDR299W TSA1P34760 196 aaKnown RBP2.11□□□□□ -2.07
BFR2YDR299W NNK1P36003 928 aa2.11□□□□□ -2.07
BFR2YDR299W GTS1P40956 396 aa2.11□□□□□ -2.07
BFR2YDR299W YGR045CP53229 120 aa2.11□□□□□ -2.07
BFR2YDR299W YNL011CP53980 444 aa2.11□□□□□ -2.07
BFR2YDR299W TRS120Q04183 1289 aa2.11□□□□□ -2.07
BFR2YDR299W PMT7Q06644 662 aa2.11□□□□□ -2.07
BFR2YDR299W TY1A-LR4P0C2I8 440 aaKnown RBP2.1□□□□□ -2.07
BFR2YDR299W TY1A-DR6P0CX70 440 aa2.1□□□□□ -2.07
BFR2YDR299W TY1A-ER1P0CX71 440 aa2.1□□□□□ -2.07
BFR2YDR299W TY1A-LR2P0CX72 440 aa2.1□□□□□ -2.07
BFR2YDR299W TY1A-PLP0CX73 440 aa2.1□□□□□ -2.07
BFR2YDR299W TY1A-JR1P0CX74 440 aa2.1□□□□□ -2.07
BFR2YDR299W TY1A-LR3P0CX75 440 aa2.1□□□□□ -2.07
BFR2YDR299W TY1A-ML2P0CX76 440 aa2.1□□□□□ -2.07
BFR2YDR299W PRP5P21372 849 aaPredicted RBP2.1□□□□□ -2.07
BFR2YDR299W AIM3P38266 947 aaKnown RBP2.1□□□□□ -2.07
BFR2YDR299W ATG1P53104 897 aa2.1□□□□□ -2.07
BFR2YDR299W MON1P53129 644 aa2.1□□□□□ -2.07
BFR2YDR299W TPP1Q03796 238 aa2.1□□□□□ -2.07
BFR2YDR299W TY1A-GR1Q12085 440 aa2.1□□□□□ -2.07
BFR2YDR299W LPX1Q12405 387 aaKnown RBP2.1□□□□□ -2.07
BFR2YDR299W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.1□□□□□ -2.07
BFR2YDR299W TY1A-OLQ92392 440 aaKnown RBP2.1□□□□□ -2.07
BFR2YDR299W FLP1P03870 423 aa2.09□□□□□ -2.07
BFR2YDR299W THI80P35202 319 aa2.09□□□□□ -2.07
BFR2YDR299W YKL077WP36081 392 aa2.09□□□□□ -2.07
BFR2YDR299W ETP1P38748 585 aaKnown RBP2.09□□□□□ -2.07
BFR2YDR299W PEX7P39108 375 aa2.09□□□□□ -2.07
BFR2YDR299W FOL2P51601 243 aaKnown RBP2.09□□□□□ -2.07
BFR2YDR299W MRPL22P53881 309 aa2.09□□□□□ -2.07
BFR2YDR299W YAF9P53930 226 aa2.09□□□□□ -2.07
BFR2YDR299W ORC3P54790 616 aa2.09□□□□□ -2.07
BFR2YDR299W CDC55Q00362 526 aa2.09□□□□□ -2.07
BFR2YDR299W INP54Q08227 384 aaKnown RBP2.09□□□□□ -2.07
BFR2YDR299W PRP6P19735 899 aaPredicted RBP2.09□□□□□ -2.08
BFR2YDR299W ARL1P38116 183 aaKnown RBP2.09□□□□□ -2.08
BFR2YDR299W ATG14P38270 344 aa2.09□□□□□ -2.08
BFR2YDR299W ACF4P47129 309 aa2.09□□□□□ -2.08
BFR2YDR299W NUT1P53114 1132 aa2.09□□□□□ -2.08
BFR2YDR299W PUS7Q08647 676 aaKnown RBP2.09□□□□□ -2.08
BFR2YDR299W GRS1P38088 690 aaKnown RBP2.08□□□□□ -2.08
BFR2YDR299W FLR1P38124 548 aa2.08□□□□□ -2.08
BFR2YDR299W YHL012WP38709 493 aa2.08□□□□□ -2.08
BFR2YDR299W NMD3P38861 518 aaKnown RBP2.08□□□□□ -2.08
BFR2YDR299W SHU2P38957 223 aa2.08□□□□□ -2.08
BFR2YDR299W YAR028WP39548 234 aa2.08□□□□□ -2.08
BFR2YDR299W SAP155P43612 1002 aa2.08□□□□□ -2.08
BFR2YDR299W NOC3Q07896 663 aaPredicted RBP2.08□□□□□ -2.08
BFR2YDR299W YDL177CQ12257 170 aa2.08□□□□□ -2.08
BFR2YDR299W TOD6P34219 525 aa2.07□□□□□ -2.08
BFR2YDR299W HSE1P38753 452 aa2.07□□□□□ -2.08
BFR2YDR299W RVS167P39743 482 aaKnown RBP2.07□□□□□ -2.08
BFR2YDR299W SLS1P42900 643 aa2.07□□□□□ -2.08
BFR2YDR299W MTR4P47047 1073 aaKnown RBP2.07□□□□□ -2.08
BFR2YDR299W RIM8P53179 542 aa2.07□□□□□ -2.08
BFR2YDR299W YLR257WQ06146 321 aaKnown RBP2.07□□□□□ -2.08
BFR2YDR299W HDA2Q06629 674 aa2.07□□□□□ -2.08
BFR2YDR299W MNL2Q12205 849 aa2.07□□□□□ -2.08
BFR2YDR299W RLF2Q12495 606 aa2.07□□□□□ -2.08
BFR2YDR299W AIM26P32858 118 aa2.06□□□□□ -2.08
BFR2YDR299W EXO5P38289 585 aa2.06□□□□□ -2.08
BFR2YDR299W NEM1P38757 446 aa2.06□□□□□ -2.08
BFR2YDR299W YNR063WP53749 607 aa2.06□□□□□ -2.08
BFR2YDR299W SNO2P53823 222 aa2.06□□□□□ -2.08
BFR2YDR299W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08 RIP-Chip
BFR2YDR299W HRK1Q08732 759 aaKnown RBP2.06□□□□□ -2.08
BFR2YDR299W YOR352WQ08816 343 aa2.06□□□□□ -2.08
BFR2YDR299W LAP2Q10740 671 aa2.06□□□□□ -2.08
BFR2YDR299W RPS13P05756 151 aaKnown RBP2.06□□□□□ -2.08
BFR2YDR299W RET1P22276 1149 aaKnown RBP2.06□□□□□ -2.08
BFR2YDR299W MDL2P33311 773 aa2.06□□□□□ -2.08
BFR2YDR299W CIC1P38779 376 aaKnown RBP2.06□□□□□ -2.08
BFR2YDR299W SAM37P50110 327 aa2.06□□□□□ -2.08
BFR2YDR299W PEX13P80667 386 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms