RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C MSH4P40965 878 aaPredicted RBP2.31□□□□□ -2.04
MSH6YDR097C EMW1P42842 904 aaKnown RBP2.31□□□□□ -2.04
MSH6YDR097C HLJ1P48353 224 aa2.31□□□□□ -2.04
MSH6YDR097C ALO1P54783 526 aaKnown RBP2.31□□□□□ -2.04
MSH6YDR097C PEX13P80667 386 aa2.31□□□□□ -2.04
MSH6YDR097C CAB1Q04430 367 aa2.31□□□□□ -2.04
MSH6YDR097C PRE3P38624 215 aa2.31□□□□□ -2.04
MSH6YDR097C YNR063WP53749 607 aa2.31□□□□□ -2.04
MSH6YDR097C VPS72Q03388 795 aa2.31□□□□□ -2.04
MSH6YDR097C SSF2Q12153 453 aaPredicted RBP2.31□□□□□ -2.04
MSH6YDR097C STI1P15705 589 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
MSH6YDR097C RPC31P17890 251 aa2.3□□□□□ -2.04
MSH6YDR097C GCD6P32501 712 aaKnown RBP2.3□□□□□ -2.04
MSH6YDR097C DUT1P33317 147 aa2.3□□□□□ -2.04
MSH6YDR097C YKL069WP36088 180 aa2.3□□□□□ -2.04
MSH6YDR097C SPR3P41901 512 aa2.3□□□□□ -2.04
MSH6YDR097C MRPS18P42847 217 aa2.3□□□□□ -2.04
MSH6YDR097C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
MSH6YDR097C ESF1Q06344 628 aaKnown RBP2.3□□□□□ -2.04
MSH6YDR097C SSB1P11484 613 aaKnown RBP2.3□□□□□ -2.04
MSH6YDR097C STE6P12866 1290 aa2.3□□□□□ -2.04
MSH6YDR097C RPA135P22138 1203 aaKnown RBP2.3□□□□□ -2.04
MSH6YDR097C ABD1P32783 436 aaPredicted RBP2.3□□□□□ -2.04
MSH6YDR097C SQT1P35184 431 aa2.3□□□□□ -2.04
MSH6YDR097C SSB2P40150 613 aaKnown RBP2.3□□□□□ -2.04
MSH6YDR097C HXT10P43581 546 aa2.3□□□□□ -2.04
MSH6YDR097C FOL1P53848 824 aa2.3□□□□□ -2.04
MSH6YDR097C DNM1P54861 757 aa2.3□□□□□ -2.04
MSH6YDR097C YLR225CQ05948 407 aaKnown RBP2.3□□□□□ -2.04
MSH6YDR097C HXK1P04806 485 aaKnown RBP2.3□□□□□ -2.04
MSH6YDR097C RGA1P39083 1007 aa2.3□□□□□ -2.04
MSH6YDR097C DSS1P39112 969 aa2.3□□□□□ -2.04
MSH6YDR097C NIT1P40447 199 aa2.3□□□□□ -2.04
MSH6YDR097C YJL181WP46987 611 aa2.3□□□□□ -2.04
MSH6YDR097C YJL049WP47048 450 aa2.3□□□□□ -2.04
MSH6YDR097C HAP5Q02516 242 aa2.3□□□□□ -2.04
MSH6YDR097C MSH6Q03834 1242 aa2.3□□□□□ -2.04
MSH6YDR097C ESC2Q06340 456 aa2.3□□□□□ -2.04
MSH6YDR097C PRT1P06103 763 aaKnown RBP2.29□□□□□ -2.04
MSH6YDR097C MNR2P35724 969 aa2.29□□□□□ -2.04
MSH6YDR097C FPR3P38911 411 aaKnown RBP2.29□□□□□ -2.04
MSH6YDR097C RAD55P38953 406 aa2.29□□□□□ -2.04
MSH6YDR097C SKP1P52286 194 aa2.29□□□□□ -2.04
MSH6YDR097C CTR9P89105 1077 aa2.29□□□□□ -2.04
MSH6YDR097C RPS31P05759 152 aaKnown RBP2.29□□□□□ -2.04
MSH6YDR097C PAF1P38351 445 aa2.29□□□□□ -2.04
MSH6YDR097C CIC1P38779 376 aaKnown RBP2.29□□□□□ -2.04
MSH6YDR097C PTC2P39966 464 aaKnown RBP2.29□□□□□ -2.04
MSH6YDR097C DLD3P39976 496 aaKnown RBP2.29□□□□□ -2.04
MSH6YDR097C SAM37P50110 327 aa2.29□□□□□ -2.04
MSH6YDR097C CDC55Q00362 526 aa2.29□□□□□ -2.04
MSH6YDR097C TOP1P04786 769 aa2.29□□□□□ -2.04
MSH6YDR097C DPS1P04802 557 aaKnown RBP2.29□□□□□ -2.04
MSH6YDR097C VTC4P47075 721 aa2.29□□□□□ -2.04
MSH6YDR097C YGR122WP53272 402 aa2.29□□□□□ -2.04
MSH6YDR097C NAN1Q02931 896 aaKnown RBP2.29□□□□□ -2.04
MSH6YDR097C CCP1P00431 361 aa2.28□□□□□ -2.04
MSH6YDR097C RAD2P07276 1031 aa2.28□□□□□ -2.04
MSH6YDR097C MCM5P29496 775 aaKnown RBP2.28□□□□□ -2.04
MSH6YDR097C VPS35P34110 944 aa2.28□□□□□ -2.04
MSH6YDR097C XKS1P42826 600 aa2.28□□□□□ -2.04
MSH6YDR097C IQG1Q12280 1495 aa2.28□□□□□ -2.04
MSH6YDR097C MCM7P38132 845 aa2.28□□□□□ -2.04
MSH6YDR097C YBR284WP38150 797 aa2.28□□□□□ -2.04
MSH6YDR097C YHR020WP38708 688 aaKnown RBP2.28□□□□□ -2.04
MSH6YDR097C ENT3P47160 408 aa2.28□□□□□ -2.04
MSH6YDR097C NOG1Q02892 647 aaKnown RBP2.28□□□□□ -2.04
MSH6YDR097C CYC8P14922 966 aa2.28□□□□□ -2.05
MSH6YDR097C LDH1P38139 375 aa2.28□□□□□ -2.05
MSH6YDR097C YBR184WP38299 523 aa2.28□□□□□ -2.05
MSH6YDR097C YTA6P40328 754 aa2.28□□□□□ -2.05
MSH6YDR097C YJR115WP47152 169 aa2.28□□□□□ -2.05
MSH6YDR097C BDF2Q07442 638 aa2.28□□□□□ -2.05
MSH6YDR097C OPI10Q08202 246 aa2.28□□□□□ -2.05
MSH6YDR097C SNQ2P32568 1501 aaKnown RBP2.28□□□□□ -2.05
MSH6YDR097C VTH1P40438 1549 aa2.28□□□□□ -2.05
MSH6YDR097C VTH2P40890 1549 aa2.28□□□□□ -2.05
MSH6YDR097C RDH54P38086 958 aa2.27□□□□□ -2.05
MSH6YDR097C YBL086CP38177 466 aa2.27□□□□□ -2.05
MSH6YDR097C PMC1P38929 1173 aaPredicted RBP2.27□□□□□ -2.05
MSH6YDR097C HXT13P39924 564 aa2.27□□□□□ -2.05
MSH6YDR097C QDR2P40474 542 aa2.27□□□□□ -2.05
MSH6YDR097C ALR2P43553 858 aa2.27□□□□□ -2.05
MSH6YDR097C HXT17P53631 564 aa2.27□□□□□ -2.05
MSH6YDR097C HXT15P54854 567 aa2.27□□□□□ -2.05
MSH6YDR097C SAS4Q04003 481 aa2.27□□□□□ -2.05
MSH6YDR097C FLC1Q08967 793 aa2.27□□□□□ -2.05
MSH6YDR097C TAF13P11747 167 aa2.27□□□□□ -2.05
MSH6YDR097C KAR1P11927 433 aa2.27□□□□□ -2.05
MSH6YDR097C RAD27P26793 382 aa2.27□□□□□ -2.05
MSH6YDR097C YJR120WP47157 116 aa2.27□□□□□ -2.05
MSH6YDR097C UFD2P54860 961 aa2.27□□□□□ -2.05
MSH6YDR097C BSC2Q05611 235 aa2.27□□□□□ -2.05
MSH6YDR097C EAF1Q06337 982 aa2.27□□□□□ -2.05
MSH6YDR097C WTM2Q12206 467 aa2.27□□□□□ -2.05
MSH6YDR097C GSC2P40989 1895 aa2.27□□□□□ -2.05
MSH6YDR097C ATG14P38270 344 aa2.27□□□□□ -2.05
MSH6YDR097C RGD2P43556 714 aa2.27□□□□□ -2.05
MSH6YDR097C ISU1Q03020 165 aa2.27□□□□□ -2.05
MSH6YDR097C COBP00163 385 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms