RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C MCM5P29496 775 aaKnown RBP6.8□□□□□ -1.32
RRI1YDL216C OMA1P36163 345 aa6.8□□□□□ -1.32
RRI1YDL216C INP52P50942 1183 aa6.8□□□□□ -1.32
RRI1YDL216C YGR122WP53272 402 aa6.8□□□□□ -1.32
RRI1YDL216C HAS1Q03532 505 aaKnown RBP6.8□□□□□ -1.32
RRI1YDL216C SHU2P38957 223 aa6.79□□□□□ -1.32
RRI1YDL216C HXK1P04806 485 aaKnown RBP6.78□□□□□ -1.32
RRI1YDL216C KAE1P36132 386 aa6.78□□□□□ -1.32
RRI1YDL216C YLR122CQ12312 125 aa6.78□□□□□ -1.32
RRI1YDL216C HTS1P07263 546 aaKnown RBP6.77□□□□□ -1.32
RRI1YDL216C SEC8P32855 1065 aa6.77□□□□□ -1.32
RRI1YDL216C POL5P39985 1022 aaKnown RBP6.77□□□□□ -1.32
RRI1YDL216C SNU71P53207 620 aaKnown RBP6.77□□□□□ -1.32
RRI1YDL216C ULP1Q02724 621 aa6.77□□□□□ -1.32
RRI1YDL216C YIG1Q08956 461 aa6.77□□□□□ -1.32
RRI1YDL216C TRP3P00937 484 aa6.76□□□□□ -1.33
RRI1YDL216C SAF1P38352 637 aa6.76□□□□□ -1.33
RRI1YDL216C FAA3P39002 694 aa6.76□□□□□ -1.33
RRI1YDL216C TOS4Q06266 489 aa6.76□□□□□ -1.33
RRI1YDL216C MCD1Q12158 566 aa6.76□□□□□ -1.33
RRI1YDL216C REC8Q12188 680 aa6.76□□□□□ -1.33
RRI1YDL216C NAM7P30771 971 aaKnown RBP6.76□□□□□ -1.33
RRI1YDL216C MAE1P36013 669 aaKnown RBP6.76□□□□□ -1.33
RRI1YDL216C FAR11P53917 953 aa6.76□□□□□ -1.33
RRI1YDL216C YPL109CQ02981 657 aa6.76□□□□□ -1.33
RRI1YDL216C OYE2Q03558 400 aaKnown RBP6.76□□□□□ -1.33
RRI1YDL216C ADI1Q03677 179 aa6.76□□□□□ -1.33
RRI1YDL216C MED7Q08278 222 aa6.76□□□□□ -1.33
RRI1YDL216C ELG1Q12050 791 aa6.76□□□□□ -1.33
RRI1YDL216C CYC8P14922 966 aa6.75□□□□□ -1.33
RRI1YDL216C SQT1P35184 431 aa6.75□□□□□ -1.33
RRI1YDL216C YKR073CP36153 106 aa6.75□□□□□ -1.33
RRI1YDL216C AKR1P39010 764 aa6.75□□□□□ -1.33
RRI1YDL216C RPS26AP39938 119 aaKnown RBP6.75□□□□□ -1.33
RRI1YDL216C RPS26BP39939 119 aaKnown RBP6.75□□□□□ -1.33
RRI1YDL216C FYV10P40492 516 aa6.75□□□□□ -1.33
RRI1YDL216C RSM26P47141 266 aa6.75□□□□□ -1.33
RRI1YDL216C GCV1P48015 400 aa6.75□□□□□ -1.33
RRI1YDL216C NOG1Q02892 647 aaKnown RBP6.75□□□□□ -1.33
RRI1YDL216C RMD1Q03441 430 aa6.75□□□□□ -1.33
RRI1YDL216C YLL054CQ12244 843 aa6.75□□□□□ -1.33
RRI1YDL216C RAD2P07276 1031 aa6.74□□□□□ -1.33
RRI1YDL216C UGA4P32837 571 aa6.74□□□□□ -1.33
RRI1YDL216C YKL077WP36081 392 aa6.74□□□□□ -1.33
RRI1YDL216C MRPS18P42847 217 aa6.74□□□□□ -1.33
RRI1YDL216C UTP22P53254 1237 aaPredicted RBP6.74□□□□□ -1.33
RRI1YDL216C ESF1Q06344 628 aaKnown RBP6.74□□□□□ -1.33
RRI1YDL216C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
RRI1YDL216C CHS2P14180 963 aa6.73□□□□□ -1.33
RRI1YDL216C MCM2P29469 868 aa6.73□□□□□ -1.33
RRI1YDL216C NCE103P53615 221 aa6.73□□□□□ -1.33
RRI1YDL216C PRE9P23638 258 aaKnown RBP6.72□□□□□ -1.33
RRI1YDL216C ARL1P38116 183 aaKnown RBP6.72□□□□□ -1.33
RRI1YDL216C YGR130CP53278 816 aa6.72□□□□□ -1.33
RRI1YDL216C MEC3Q02574 474 aa6.72□□□□□ -1.33
RRI1YDL216C SPR28Q04921 423 aa6.72□□□□□ -1.33
RRI1YDL216C SVF1Q05515 481 aa6.72□□□□□ -1.33
RRI1YDL216C ERS1P17261 260 aa6.71□□□□□ -1.34
RRI1YDL216C MSH3P25336 1018 aa6.71□□□□□ -1.34
RRI1YDL216C EXO5P38289 585 aa6.71□□□□□ -1.34
RRI1YDL216C PEX13P80667 386 aa6.71□□□□□ -1.34
RRI1YDL216C YMR074CQ04773 145 aa6.71□□□□□ -1.34
RRI1YDL216C NAP1P25293 417 aaKnown RBP6.7□□□□□ -1.34
RRI1YDL216C PEX28P38848 579 aa6.7□□□□□ -1.34
RRI1YDL216C TY1A-LR4P0C2I8 440 aaKnown RBP6.69□□□□□ -1.34
RRI1YDL216C TY1A-DR6P0CX70 440 aa6.69□□□□□ -1.34
RRI1YDL216C TY1A-ER1P0CX71 440 aa6.69□□□□□ -1.34
RRI1YDL216C TY1A-LR2P0CX72 440 aa6.69□□□□□ -1.34
RRI1YDL216C TY1A-PLP0CX73 440 aa6.69□□□□□ -1.34
RRI1YDL216C TY1A-JR1P0CX74 440 aa6.69□□□□□ -1.34
RRI1YDL216C TY1A-LR3P0CX75 440 aa6.69□□□□□ -1.34
RRI1YDL216C TY1A-ML2P0CX76 440 aa6.69□□□□□ -1.34
RRI1YDL216C TAF13P11747 167 aa6.69□□□□□ -1.34
RRI1YDL216C PEP7P32609 515 aa6.69□□□□□ -1.34
RRI1YDL216C TOS1P38288 455 aa6.69□□□□□ -1.34
RRI1YDL216C YOR223WQ12015 292 aa6.69□□□□□ -1.34
RRI1YDL216C TY1A-GR1Q12085 440 aa6.69□□□□□ -1.34
RRI1YDL216C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.69□□□□□ -1.34
RRI1YDL216C TY1A-OLQ92392 440 aaKnown RBP6.69□□□□□ -1.34
RRI1YDL216C VMA4P22203 233 aaKnown RBP6.68□□□□□ -1.34
RRI1YDL216C MTR4P47047 1073 aaKnown RBP6.68□□□□□ -1.34
RRI1YDL216C KIP3P53086 805 aaKnown RBP6.68□□□□□ -1.34
RRI1YDL216C REI1P38344 393 aaPredicted RBP6.67□□□□□ -1.34
RRI1YDL216C PIC2P40035 300 aa6.67□□□□□ -1.34
RRI1YDL216C CTH1P47976 325 aa6.67□□□□□ -1.34
RRI1YDL216C SEC23P15303 768 aaKnown RBP6.66□□□□□ -1.34
RRI1YDL216C PUB1P32588 453 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
RRI1YDL216C LIP5P32875 414 aa6.66□□□□□ -1.34
RRI1YDL216C SPO74P45819 413 aa6.66□□□□□ -1.34
RRI1YDL216C YGL140CP53120 1219 aa6.66□□□□□ -1.34
RRI1YDL216C CYC7P00045 113 aa6.64□□□□□ -1.35
RRI1YDL216C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
RRI1YDL216C MSB1P21339 1137 aaKnown RBP6.64□□□□□ -1.35
RRI1YDL216C ATG14P38270 344 aa6.64□□□□□ -1.35
RRI1YDL216C NEM1P38757 446 aa6.64□□□□□ -1.35
RRI1YDL216C SLS1P42900 643 aa6.64□□□□□ -1.35
RRI1YDL216C NOP7P53261 605 aaKnown RBP6.64□□□□□ -1.35
RRI1YDL216C MNR2P35724 969 aa6.63□□□□□ -1.35
RRI1YDL216C PAM1P37304 830 aaKnown RBP6.63□□□□□ -1.35
RRI1YDL216C RDH54P38086 958 aa6.63□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms