RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W TY1A-BLQ12266 440 aa2.5□□□□□ -2.01
MSH5YDL154W PEX13P80667 386 aa2.5□□□□□ -2.01
MSH5YDL154W LCB5Q06147 687 aaKnown RBP2.5□□□□□ -2.01
MSH5YDL154W IML1P47170 1584 aa2.5□□□□□ -2.01
MSH5YDL154W HXK1P04806 485 aaKnown RBP2.49□□□□□ -2.01
MSH5YDL154W MET22P32179 357 aa2.49□□□□□ -2.01
MSH5YDL154W MNR2P35724 969 aa2.49□□□□□ -2.01
MSH5YDL154W NEO1P40527 1151 aa2.49□□□□□ -2.01
MSH5YDL154W NUT1P53114 1132 aa2.49□□□□□ -2.01
MSH5YDL154W CAF120P53836 1060 aa2.49□□□□□ -2.01
MSH5YDL154W NAM8Q00539 523 aaKnown RBP2.49□□□□□ -2.01
MSH5YDL154W ULP1Q02724 621 aa2.49□□□□□ -2.01
MSH5YDL154W MRL1Q06815 381 aa2.49□□□□□ -2.01
MSH5YDL154W SPO14P36126 1683 aa2.49□□□□□ -2.01
MSH5YDL154W FUS1P11710 512 aa2.49□□□□□ -2.01
MSH5YDL154W IDI1P15496 288 aa2.49□□□□□ -2.01
MSH5YDL154W YKL077WP36081 392 aa2.49□□□□□ -2.01
MSH5YDL154W CUZ1P53899 274 aa2.49□□□□□ -2.01
MSH5YDL154W ADI1Q03677 179 aa2.49□□□□□ -2.01
MSH5YDL154W USO1P25386 1790 aa2.49□□□□□ -2.01
MSH5YDL154W TY1B-BRQ12193 1756 aa2.49□□□□□ -2.01
MSH5YDL154W TY1B-GR3Q12316 1755 aa2.49□□□□□ -2.01
MSH5YDL154W TY1B-ORQ92393 1755 aa2.49□□□□□ -2.01
MSH5YDL154W YER156CP40093 338 aaKnown RBP2.48□□□□□ -2.01
MSH5YDL154W YPL109CQ02981 657 aa2.48□□□□□ -2.01
MSH5YDL154W VPS16Q03308 798 aa2.48□□□□□ -2.01
MSH5YDL154W TY1A-MR1Q04215 440 aa2.48□□□□□ -2.01
MSH5YDL154W PAN1P32521 1480 aa2.48□□□□□ -2.01
MSH5YDL154W SCC2Q04002 1493 aa2.48□□□□□ -2.01
MSH5YDL154W FET4P40988 552 aa2.48□□□□□ -2.01
MSH5YDL154W KRI1P42846 591 aaKnown RBP2.48□□□□□ -2.01
MSH5YDL154W YAF9P53930 226 aa2.48□□□□□ -2.01
MSH5YDL154W GDE1Q02979 1223 aa2.48□□□□□ -2.01
MSH5YDL154W MSH6Q03834 1242 aa2.48□□□□□ -2.01
MSH5YDL154W YOR1P53049 1477 aa2.48□□□□□ -2.01
MSH5YDL154W SRP40P32583 406 aaPredicted RBP2.48□□□□□ -2.01
MSH5YDL154W UGA4P32837 571 aa2.48□□□□□ -2.01
MSH5YDL154W PEX28P38848 579 aa2.48□□□□□ -2.01
MSH5YDL154W XKS1P42826 600 aa2.48□□□□□ -2.01
MSH5YDL154W SOK2P53438 785 aaPredicted RBP2.48□□□□□ -2.01
MSH5YDL154W ALD3P54114 506 aa2.48□□□□□ -2.01
MSH5YDL154W TY1A-DR2Q03964 440 aaKnown RBP2.48□□□□□ -2.01
MSH5YDL154W TOS4Q06266 489 aa2.48□□□□□ -2.01
MSH5YDL154W PIN2Q12057 282 aa2.48□□□□□ -2.01
MSH5YDL154W FAL1Q12099 399 aaKnown RBP2.48□□□□□ -2.01
MSH5YDL154W DED1P06634 604 aaKnown RBP2.47□□□□□ -2.01
MSH5YDL154W PRK1P40494 810 aa2.47□□□□□ -2.01
MSH5YDL154W YIR007WP40566 764 aa2.47□□□□□ -2.01
MSH5YDL154W MTR4P47047 1073 aaKnown RBP2.47□□□□□ -2.01
MSH5YDL154W GLO4Q12320 285 aa2.47□□□□□ -2.01
MSH5YDL154W YOR131CQ12486 218 aa2.47□□□□□ -2.01
MSH5YDL154W YDR461C-AQ2V2P7 80 aa2.47□□□□□ -2.01
MSH5YDL154W YTA7P40340 1379 aa2.47□□□□□ -2.01
MSH5YDL154W ARO1P08566 1588 aaKnown RBP2.47□□□□□ -2.01
MSH5YDL154W PRI2P20457 528 aa2.47□□□□□ -2.01
MSH5YDL154W NPR1P22211 790 aa2.47□□□□□ -2.01
MSH5YDL154W INP51P40559 946 aaKnown RBP2.47□□□□□ -2.01
MSH5YDL154W LSB6P42951 607 aa2.47□□□□□ -2.01
MSH5YDL154W PDR10P51533 1564 aa2.47□□□□□ -2.01
MSH5YDL154W CTR9P89105 1077 aa2.47□□□□□ -2.01
MSH5YDL154W MAG2Q06436 670 aaKnown RBP2.47□□□□□ -2.01
MSH5YDL154W RTT10Q08924 1013 aa2.47□□□□□ -2.01
MSH5YDL154W TOR1P35169 2470 aa2.46□□□□□ -2.02
MSH5YDL154W COBP00163 385 aa2.46□□□□□ -2.02
MSH5YDL154W YKL091CP33324 310 aaKnown RBP2.46□□□□□ -2.02
MSH5YDL154W SPO20Q04359 397 aa2.46□□□□□ -2.02
MSH5YDL154W TDA5Q06417 326 aaKnown RBP2.46□□□□□ -2.02
MSH5YDL154W TMA46Q12000 345 aaKnown RBP2.46□□□□□ -2.02
MSH5YDL154W XRN1P22147 1528 aaKnown RBP2.46□□□□□ -2.02
MSH5YDL154W BAS1P22035 811 aa2.46□□□□□ -2.02
MSH5YDL154W YJR124CP47159 448 aa2.46□□□□□ -2.02
MSH5YDL154W FAA4P47912 694 aaKnown RBP2.46□□□□□ -2.02
MSH5YDL154W FPR4Q06205 392 aaPredicted RBP2.46□□□□□ -2.02
MSH5YDL154W YOL098CQ12496 1037 aa2.46□□□□□ -2.02
MSH5YDL154W CMR1Q12510 522 aaKnown RBP2.46□□□□□ -2.02
MSH5YDL154W CDC34P14682 295 aa2.45□□□□□ -2.02
MSH5YDL154W MSH3P25336 1018 aa2.45□□□□□ -2.02
MSH5YDL154W DUR3P33413 735 aa2.45□□□□□ -2.02
MSH5YDL154W ALG14P38242 237 aa2.45□□□□□ -2.02
MSH5YDL154W LYS5P50113 272 aa2.45□□□□□ -2.02
MSH5YDL154W SOG2Q08817 791 aa2.45□□□□□ -2.02
MSH5YDL154W CDC53Q12018 815 aaKnown RBP2.45□□□□□ -2.02
MSH5YDL154W LEM3P42838 414 aa2.45□□□□□ -2.02
MSH5YDL154W YJL049WP47048 450 aa2.45□□□□□ -2.02
MSH5YDL154W GUP1P53154 560 aa2.45□□□□□ -2.02
MSH5YDL154W UTP22P53254 1237 aaPredicted RBP2.45□□□□□ -2.02
MSH5YDL154W YNR063WP53749 607 aa2.45□□□□□ -2.02
MSH5YDL154W ORC1P54784 914 aaPredicted RBP2.45□□□□□ -2.02
MSH5YDL154W YVH1Q02256 364 aaKnown RBP2.45□□□□□ -2.02
MSH5YDL154W SYT1Q06836 1226 aa2.45□□□□□ -2.02
MSH5YDL154W AVO1Q08236 1176 aa2.45□□□□□ -2.02
MSH5YDL154W UFD4P33202 1483 aa2.45□□□□□ -2.02
MSH5YDL154W GCR1P07261 785 aa2.44□□□□□ -2.02
MSH5YDL154W SAC7P17121 654 aa2.44□□□□□ -2.02
MSH5YDL154W PPG1P32838 368 aa2.44□□□□□ -2.02
MSH5YDL154W RIM11P38615 370 aa2.44□□□□□ -2.02
MSH5YDL154W MSC7P38694 644 aa2.44□□□□□ -2.02
MSH5YDL154W ACO2P39533 789 aa2.44□□□□□ -2.02
MSH5YDL154W PIC2P40035 300 aa2.44□□□□□ -2.02
MSH5YDL154W GIP2P40036 548 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 6.6 ms