RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	FPR3	P38911	411 aa	Known RBP	7.47	□□□□□ -1.21
RPN5	YDL147W	TIM54	P47045	478 aa		7.47	□□□□□ -1.21
RPN5	YDL147W	YGL140C	P53120	1219 aa		7.47	□□□□□ -1.21
RPN5	YDL147W	SCW11	P53189	542 aa		7.47	□□□□□ -1.21
RPN5	YDL147W	KRE33	P53914	1056 aa	Known RBP	7.47	□□□□□ -1.21
RPN5	YDL147W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7.47	□□□□□ -1.21	RIP-Chip
RPN5	YDL147W	GLO4	Q12320	285 aa		7.47	□□□□□ -1.21
RPN5	YDL147W	MSH3	P25336	1018 aa		7.46	□□□□□ -1.22
RPN5	YDL147W	GLY1	P37303	387 aa	Known RBP	7.46	□□□□□ -1.22
RPN5	YDL147W	INP51	P40559	946 aa	Known RBP	7.46	□□□□□ -1.22
RPN5	YDL147W	SPO20	Q04359	397 aa		7.46	□□□□□ -1.22
RPN5	YDL147W	CCP1	P00431	361 aa		7.45	□□□□□ -1.22
RPN5	YDL147W	SEC23	P15303	768 aa	Known RBP	7.45	□□□□□ -1.22
RPN5	YDL147W	BUD6	P41697	788 aa		7.45	□□□□□ -1.22
RPN5	YDL147W	ALG12	P53730	551 aa		7.45	□□□□□ -1.22
RPN5	YDL147W	YMR265C	Q03508	461 aa	Known RBP	7.45	□□□□□ -1.22
RPN5	YDL147W	FPS1	P23900	669 aa		7.44	□□□□□ -1.22
RPN5	YDL147W	TAT2	P38967	592 aa		7.44	□□□□□ -1.22
RPN5	YDL147W	TYW3	P53177	273 aa		7.44	□□□□□ -1.22
RPN5	YDL147W	BIO5	P53744	561 aa	Known RBP	7.44	□□□□□ -1.22
RPN5	YDL147W	SPO75	Q07798	868 aa		7.44	□□□□□ -1.22
RPN5	YDL147W	DIT1	P21623	536 aa		7.43	□□□□□ -1.22
RPN5	YDL147W	YJR124C	P47159	448 aa		7.43	□□□□□ -1.22
RPN5	YDL147W	EEB1	Q02891	456 aa		7.43	□□□□□ -1.22
RPN5	YDL147W	HDA2	Q06629	674 aa		7.43	□□□□□ -1.22
RPN5	YDL147W	VMA4	P22203	233 aa	Known RBP	7.42	□□□□□ -1.22
RPN5	YDL147W	ENT3	P47160	408 aa		7.42	□□□□□ -1.22
RPN5	YDL147W	SIW14	P53965	281 aa		7.42	□□□□□ -1.22
RPN5	YDL147W	OSH2	Q12451	1283 aa		7.42	□□□□□ -1.22
RPN5	YDL147W	MET6	P05694	767 aa	Known RBP	7.41	□□□□□ -1.22
RPN5	YDL147W	YKL069W	P36088	180 aa		7.41	□□□□□ -1.22
RPN5	YDL147W	CHZ1	P40019	153 aa	Predicted RBP	7.41	□□□□□ -1.22
RPN5	YDL147W	FET4	P40988	552 aa		7.41	□□□□□ -1.22
RPN5	YDL147W	NAM8	Q00539	523 aa	Known RBP	7.41	□□□□□ -1.22
RPN5	YDL147W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.41	□□□□□ -1.22	not detected
RPN5	YDL147W	TY1A-BL	Q12266	440 aa		7.41	□□□□□ -1.22
RPN5	YDL147W	AGP1	P25376	633 aa		7.4	□□□□□ -1.22
RPN5	YDL147W	LYP1	P32487	611 aa		7.4	□□□□□ -1.22
RPN5	YDL147W	ATG14	P38270	344 aa		7.4	□□□□□ -1.22
RPN5	YDL147W	GNP1	P48813	663 aa		7.4	□□□□□ -1.22
RPN5	YDL147W	TRP2	P00899	507 aa	Known RBP	7.39	□□□□□ -1.23
RPN5	YDL147W	HTS1	P07263	546 aa	Known RBP	7.39	□□□□□ -1.23
RPN5	YDL147W	RER2	P35196	286 aa		7.39	□□□□□ -1.23
RPN5	YDL147W	NUP82	P40368	713 aa		7.39	□□□□□ -1.23
RPN5	YDL147W	MTR4	P47047	1073 aa	Known RBP	7.39	□□□□□ -1.23
RPN5	YDL147W	YGR125W	P53273	1036 aa		7.39	□□□□□ -1.23
RPN5	YDL147W	YNR065C	P53751	1116 aa		7.39	□□□□□ -1.23
RPN5	YDL147W	FAR11	P53917	953 aa		7.39	□□□□□ -1.23
RPN5	YDL147W	POB3	Q04636	552 aa	Known RBP	7.39	□□□□□ -1.23
RPN5	YDL147W	SOG2	Q08817	791 aa		7.39	□□□□□ -1.23
RPN5	YDL147W	SBA1	P28707	216 aa	Known RBP	7.38	□□□□□ -1.23
RPN5	YDL147W	MRP8	P35719	219 aa		7.38	□□□□□ -1.23
RPN5	YDL147W	EXO5	P38289	585 aa		7.38	□□□□□ -1.23
RPN5	YDL147W	YBR184W	P38299	523 aa		7.38	□□□□□ -1.23
RPN5	YDL147W	MSC7	P38694	644 aa		7.38	□□□□□ -1.23
RPN5	YDL147W	SNF7	P39929	240 aa	Known RBP	7.38	□□□□□ -1.23
RPN5	YDL147W	NEO1	P40527	1151 aa		7.38	□□□□□ -1.23
RPN5	YDL147W	LSB6	P42951	607 aa		7.38	□□□□□ -1.23
RPN5	YDL147W	GUP1	P53154	560 aa		7.38	□□□□□ -1.23
RPN5	YDL147W	ADE12	P80210	433 aa	Known RBP	7.38	□□□□□ -1.23
RPN5	YDL147W	SHE9	Q04172	456 aa		7.38	□□□□□ -1.23
RPN5	YDL147W	FLC1	Q08967	793 aa		7.38	□□□□□ -1.23
RPN5	YDL147W	HVG1	P0CE11	249 aa		7.37	□□□□□ -1.23
RPN5	YDL147W	RDH54	P38086	958 aa		7.37	□□□□□ -1.23
RPN5	YDL147W	AMN1	P38285	549 aa	Predicted RBP	7.37	□□□□□ -1.23
RPN5	YDL147W	GGA2	P38817	585 aa	Known RBP	7.37	□□□□□ -1.23
RPN5	YDL147W	PRK1	P40494	810 aa		7.37	□□□□□ -1.23
RPN5	YDL147W	IRR1	P40541	1150 aa		7.37	□□□□□ -1.23
RPN5	YDL147W	LEM3	P42838	414 aa		7.37	□□□□□ -1.23
RPN5	YDL147W	CUZ1	P53899	274 aa		7.37	□□□□□ -1.23
RPN5	YDL147W	ROD1	Q02805	837 aa		7.37	□□□□□ -1.23
RPN5	YDL147W	EST2	Q06163	884 aa		7.37	□□□□□ -1.23
RPN5	YDL147W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	7.36	□□□□□ -1.23	RIP-Chip
RPN5	YDL147W	DED1	P06634	604 aa	Known RBP	7.36	□□□□□ -1.23
RPN5	YDL147W	TFA2	P36145	328 aa		7.36	□□□□□ -1.23
RPN5	YDL147W	HXT13	P39924	564 aa		7.36	□□□□□ -1.23
RPN5	YDL147W	UTP22	P53254	1237 aa	Predicted RBP	7.36	□□□□□ -1.23
RPN5	YDL147W	HXT17	P53631	564 aa		7.36	□□□□□ -1.23
RPN5	YDL147W	HXT15	P54854	567 aa		7.36	□□□□□ -1.23
RPN5	YDL147W	REC8	Q12188	680 aa		7.36	□□□□□ -1.23
RPN5	YDL147W	HEM13	P11353	328 aa	Known RBP	7.35	□□□□□ -1.23
RPN5	YDL147W	PHO8	P11491	566 aa		7.35	□□□□□ -1.23
RPN5	YDL147W	GAL11	P19659	1081 aa		7.35	□□□□□ -1.23
RPN5	YDL147W	HSP60	P19882	572 aa	Known RBP	7.35	□□□□□ -1.23
RPN5	YDL147W	ADD66	P36040	267 aa		7.35	□□□□□ -1.23
RPN5	YDL147W	RSP5	P39940	809 aa	Known RBP	7.35	□□□□□ -1.23
RPN5	YDL147W	ROG3	P43602	733 aa		7.35	□□□□□ -1.23
RPN5	YDL147W	TY1A-DR2	Q03964	440 aa	Known RBP	7.35	□□□□□ -1.23
RPN5	YDL147W	TY1A-MR1	Q04215	440 aa		7.35	□□□□□ -1.23
RPN5	YDL147W	UTP14	Q04500	899 aa	Known RBP	7.35	□□□□□ -1.23
RPN5	YDL147W	YLR225C	Q05948	407 aa	Known RBP	7.35	□□□□□ -1.23
RPN5	YDL147W	YLR125W	Q12138	136 aa		7.35	□□□□□ -1.23
RPN5	YDL147W	YDR461C-A	Q2V2P7	80 aa		7.35	□□□□□ -1.23
RPN5	YDL147W	ABD1	P32783	436 aa	Predicted RBP	7.34	□□□□□ -1.23
RPN5	YDL147W	VBA5	P36172	582 aa		7.34	□□□□□ -1.23
RPN5	YDL147W	CEM1	P39525	442 aa		7.34	□□□□□ -1.23
RPN5	YDL147W	MRP10	O75012	95 aa		7.33	□□□□□ -1.24
RPN5	YDL147W	INO1	P11986	533 aa		7.33	□□□□□ -1.24
RPN5	YDL147W	RPL8B	P29453	256 aa	Known RBP	7.33	□□□□□ -1.24
RPN5	YDL147W	PBY1	P38254	753 aa		7.33	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms