RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W SNU71P53207 620 aaKnown RBP7.83□□□□□ -1.16
NUP84YDL116W PKH3Q03306 898 aaPredicted RBP7.83□□□□□ -1.16
NUP84YDL116W EIS1Q05050 843 aaKnown RBP7.83□□□□□ -1.16
NUP84YDL116W YCG1Q06680 1035 aa7.83□□□□□ -1.16
NUP84YDL116W YOL075CQ08234 1294 aa7.83□□□□□ -1.16
NUP84YDL116W YKL133CP36066 463 aa7.83□□□□□ -1.16
NUP84YDL116W MSH1P25846 959 aa7.82□□□□□ -1.16
NUP84YDL116W CAJ1P39101 391 aa7.82□□□□□ -1.16
NUP84YDL116W ATG3P40344 310 aa7.82□□□□□ -1.16
NUP84YDL116W UBP10P53874 792 aaPredicted RBP7.82□□□□□ -1.16
NUP84YDL116W HOT1Q03213 719 aa7.82□□□□□ -1.16
NUP84YDL116W PSO2P30620 661 aa7.81□□□□□ -1.16
NUP84YDL116W YNL035CP53962 389 aaKnown RBP7.81□□□□□ -1.16
NUP84YDL116W PPM2Q08282 695 aa7.81□□□□□ -1.16
NUP84YDL116W YRF1-3P0CX14 1859 aa7.81□□□□□ -1.16
NUP84YDL116W YRF1-7P0CX15 1859 aa7.81□□□□□ -1.16
NUP84YDL116W YRF1-6P53819 1859 aa7.81□□□□□ -1.16
NUP84YDL116W PAP1P29468 568 aaKnown RBP7.81□□□□□ -1.16
NUP84YDL116W RER2P35196 286 aa7.81□□□□□ -1.16
NUP84YDL116W GRX7P38068 203 aa7.81□□□□□ -1.16
NUP84YDL116W NDC80P40460 691 aa7.81□□□□□ -1.16
NUP84YDL116W MVP1P40959 511 aaKnown RBP7.81□□□□□ -1.16
NUP84YDL116W CDC37P06101 506 aaKnown RBP7.8□□□□□ -1.16
NUP84YDL116W COQ1P18900 473 aa7.8□□□□□ -1.16
NUP84YDL116W MRPL32P25348 183 aa7.8□□□□□ -1.16
NUP84YDL116W RNT1Q02555 471 aa7.8□□□□□ -1.16
NUP84YDL116W YMR196WQ04336 1088 aa7.8□□□□□ -1.16
NUP84YDL116W EST2Q06163 884 aa7.8□□□□□ -1.16
NUP84YDL116W ATG23Q06671 453 aa7.8□□□□□ -1.16
NUP84YDL116W YPL225WQ08971 146 aaKnown RBP7.8□□□□□ -1.16
NUP84YDL116W RRP6Q12149 733 aaKnown RBP7.8□□□□□ -1.16
NUP84YDL116W RSF2P46974 1380 aa7.8□□□□□ -1.16
NUP84YDL116W SSA2P10592 639 aaKnown RBP7.8□□□□□ -1.16
NUP84YDL116W SWI4P25302 1093 aaKnown RBP7.8□□□□□ -1.16
NUP84YDL116W HAL5P38970 855 aaKnown RBP7.8□□□□□ -1.16
NUP84YDL116W CTK3P46963 296 aaPredicted RBP7.8□□□□□ -1.16
NUP84YDL116W YGR237CP50089 785 aa7.8□□□□□ -1.16
NUP84YDL116W GIS4Q04233 774 aa7.8□□□□□ -1.16
NUP84YDL116W HCR1Q05775 265 aaKnown RBP7.8□□□□□ -1.16
NUP84YDL116W SSP2Q08646 371 aa7.8□□□□□ -1.16
NUP84YDL116W PTC5Q12511 572 aa7.8□□□□□ -1.16
NUP84YDL116W DAL7P21826 554 aa7.79□□□□□ -1.16
NUP84YDL116W RAD53P22216 821 aa7.79□□□□□ -1.16
NUP84YDL116W NGR1P32831 672 aaKnown RBP7.79□□□□□ -1.16
NUP84YDL116W ADE17P38009 592 aaKnown RBP7.79□□□□□ -1.16
NUP84YDL116W PTC4P38089 393 aa7.79□□□□□ -1.16
NUP84YDL116W SMF1P38925 575 aa7.79□□□□□ -1.16
NUP84YDL116W VPS38Q05919 439 aa7.79□□□□□ -1.16
NUP84YDL116W RAD1P06777 1100 aa7.78□□□□□ -1.16
NUP84YDL116W PET111P08468 800 aa7.78□□□□□ -1.16
NUP84YDL116W SPO12P17123 173 aa7.78□□□□□ -1.16
NUP84YDL116W PHO13P19881 312 aa7.78□□□□□ -1.16
NUP84YDL116W CCT4P39078 528 aaKnown RBP7.78□□□□□ -1.16
NUP84YDL116W ENT1Q12518 454 aa7.78□□□□□ -1.16
NUP84YDL116W PGI1P12709 554 aaKnown RBP7.78□□□□□ -1.16
NUP84YDL116W PAM1P37304 830 aaKnown RBP7.78□□□□□ -1.16
NUP84YDL116W VPS29P38759 282 aa7.78□□□□□ -1.16
NUP84YDL116W UME1Q03010 460 aa7.78□□□□□ -1.16
NUP84YDL116W YOR223WQ12015 292 aa7.78□□□□□ -1.16
NUP84YDL116W GET3Q12154 354 aaKnown RBP7.78□□□□□ -1.16
NUP84YDL116W YOL087CQ99247 1116 aa7.78□□□□□ -1.16
NUP84YDL116W COBP00163 385 aa7.77□□□□□ -1.17
NUP84YDL116W OPI1P21957 404 aa7.77□□□□□ -1.17
NUP84YDL116W BDF1P35817 686 aa7.77□□□□□ -1.17
NUP84YDL116W RFT1P38206 574 aaPredicted RBP7.77□□□□□ -1.17
NUP84YDL116W CSM2P40465 213 aa7.77□□□□□ -1.17
NUP84YDL116W LYS14P40971 790 aa7.77□□□□□ -1.17
NUP84YDL116W TFG2P41896 400 aaPredicted RBP7.77□□□□□ -1.17
NUP84YDL116W MIC19P43594 170 aa7.77□□□□□ -1.17
NUP84YDL116W GFD1Q04839 188 aaKnown RBP7.77□□□□□ -1.17
NUP84YDL116W INM2Q05533 292 aa7.77□□□□□ -1.17
NUP84YDL116W CWC2Q12046 339 aaPredicted RBP7.77□□□□□ -1.17
NUP84YDL116W MTF2P10849 440 aa7.77□□□□□ -1.17
NUP84YDL116W MET1P36150 593 aa7.77□□□□□ -1.17
NUP84YDL116W EDS1P38073 919 aa7.77□□□□□ -1.17
NUP84YDL116W ATG36P46983 293 aa7.77□□□□□ -1.17
NUP84YDL116W BOP3P53958 396 aa7.77□□□□□ -1.17
NUP84YDL116W FAS2P19097 1887 aaKnown RBP7.77□□□□□ -1.17
NUP84YDL116W RRP8P38961 392 aaKnown RBP7.76□□□□□ -1.17
NUP84YDL116W APP1P53933 587 aa7.76□□□□□ -1.17
NUP84YDL116W UFD2P54860 961 aa7.76□□□□□ -1.17
NUP84YDL116W KAR5Q04746 504 aa7.76□□□□□ -1.17
NUP84YDL116W TFC6Q06339 672 aa7.76□□□□□ -1.17
NUP84YDL116W TAH18Q12181 623 aa7.76□□□□□ -1.17
NUP84YDL116W ERG12P07277 443 aa7.76□□□□□ -1.17
NUP84YDL116W RPO26P20435 155 aa7.76□□□□□ -1.17
NUP84YDL116W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
NUP84YDL116W CSN12P47130 423 aa7.76□□□□□ -1.17
NUP84YDL116W SPN1Q06505 410 aaPredicted RBP7.76□□□□□ -1.17
NUP84YDL116W JIP3O13555 125 aa7.75□□□□□ -1.17
NUP84YDL116W SAP190P36123 1033 aa7.75□□□□□ -1.17
NUP84YDL116W RPL34AP87262 121 aaPredicted RBP7.75□□□□□ -1.17
NUP84YDL116W EBS1Q03466 884 aaKnown RBP7.75□□□□□ -1.17
NUP84YDL116W PRP42Q03776 544 aaKnown RBP7.75□□□□□ -1.17
NUP84YDL116W YOR111WQ99210 232 aa7.75□□□□□ -1.17
NUP84YDL116W TIF1P10081 395 aaKnown RBP7.74□□□□□ -1.17
NUP84YDL116W RRN6P32786 894 aa7.74□□□□□ -1.17
NUP84YDL116W ERG7P38604 731 aa7.74□□□□□ -1.17
NUP84YDL116W CCC2P38995 1004 aa7.74□□□□□ -1.17
NUP84YDL116W ALD2P47771 506 aa7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms