RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	YDL177C	Q12257	170 aa		4.62	□□□□□ -1.67
HMRA2	YCR096C	RRN6	P32786	894 aa		4.61	□□□□□ -1.67
HMRA2	YCR096C	MRPL22	P53881	309 aa		4.61	□□□□□ -1.67
HMRA2	YCR096C	YVC1	Q12324	675 aa		4.61	□□□□□ -1.67
HMRA2	YCR096C	COB	P00163	385 aa		4.6	□□□□□ -1.67
HMRA2	YCR096C	HTS1	P07263	546 aa	Known RBP	4.6	□□□□□ -1.67
HMRA2	YCR096C	YML083C	Q04526	418 aa		4.6	□□□□□ -1.67
HMRA2	YCR096C	RIM8	P53179	542 aa		4.59	□□□□□ -1.67
HMRA2	YCR096C	MEC3	Q02574	474 aa		4.59	□□□□□ -1.67
HMRA2	YCR096C	LSO1	Q3E827	93 aa		4.59	□□□□□ -1.67
HMRA2	YCR096C	NPR1	P22211	790 aa		4.58	□□□□□ -1.68
HMRA2	YCR096C	PTC7	P38797	343 aa		4.58	□□□□□ -1.68
HMRA2	YCR096C	CMR1	Q12510	522 aa	Known RBP	4.58	□□□□□ -1.68
HMRA2	YCR096C	NFS1	P25374	497 aa		4.57	□□□□□ -1.68
HMRA2	YCR096C	DUR3	P33413	735 aa		4.57	□□□□□ -1.68
HMRA2	YCR096C	RIM11	P38615	370 aa		4.57	□□□□□ -1.68
HMRA2	YCR096C	TOD6	P34219	525 aa		4.56	□□□□□ -1.68
HMRA2	YCR096C	REI1	P38344	393 aa	Predicted RBP	4.56	□□□□□ -1.68
HMRA2	YCR096C	PRP5	P21372	849 aa	Predicted RBP	4.55	□□□□□ -1.68
HMRA2	YCR096C	ETP1	P38748	585 aa	Known RBP	4.55	□□□□□ -1.68
HMRA2	YCR096C	GTS1	P40956	396 aa		4.55	□□□□□ -1.68
HMRA2	YCR096C	UTP22	P53254	1237 aa	Predicted RBP	4.55	□□□□□ -1.68
HMRA2	YCR096C	GSF2	Q04697	403 aa	Known RBP	4.55	□□□□□ -1.68
HMRA2	YCR096C	YPL277C	Q08989	487 aa		4.55	□□□□□ -1.68
HMRA2	YCR096C	SOD2	P00447	233 aa		4.54	□□□□□ -1.68
HMRA2	YCR096C	SMY2	P32909	740 aa	Known RBP	4.54	□□□□□ -1.68
HMRA2	YCR096C	ABZ1	P37254	787 aa	Predicted RBP	4.54	□□□□□ -1.68
HMRA2	YCR096C	ELA1	P53861	379 aa	Predicted RBP	4.54	□□□□□ -1.68
HMRA2	YCR096C	TAD3	Q9URQ3	322 aa		4.54	□□□□□ -1.68
HMRA2	YCR096C	YGR045C	P53229	120 aa		4.53	□□□□□ -1.68
HMRA2	YCR096C	BOL3	P39724	118 aa		4.52	□□□□□ -1.69
HMRA2	YCR096C	NOB1	Q08444	459 aa	Known RBP	4.52	□□□□□ -1.69
HMRA2	YCR096C	FUR4	P05316	633 aa	Known RBP	4.5	□□□□□ -1.69
HMRA2	YCR096C	RPS13	P05756	151 aa	Known RBP	4.5	□□□□□ -1.69
HMRA2	YCR096C	NNK1	P36003	928 aa		4.5	□□□□□ -1.69
HMRA2	YCR096C	SHM2	P37291	469 aa	Known RBP	4.5	□□□□□ -1.69
HMRA2	YCR096C	CLU1	Q03690	1277 aa	Known RBP	4.5	□□□□□ -1.69
HMRA2	YCR096C	RSC4	Q02206	625 aa		4.49	□□□□□ -1.69
HMRA2	YCR096C	PUS7	Q08647	676 aa	Known RBP	4.49	□□□□□ -1.69
HMRA2	YCR096C	TUB2	P02557	457 aa	Known RBP	4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-DR6	P0CX70	440 aa		4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-ER1	P0CX71	440 aa		4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-LR2	P0CX72	440 aa		4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-PL	P0CX73	440 aa		4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-JR1	P0CX74	440 aa		4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-LR3	P0CX75	440 aa		4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-ML2	P0CX76	440 aa		4.48	□□□□□ -1.69
HMRA2	YCR096C	CTS1	P29029	562 aa		4.48	□□□□□ -1.69
HMRA2	YCR096C	ECM2	P38241	364 aa	Known RBP	4.48	□□□□□ -1.69
HMRA2	YCR096C	AVO1	Q08236	1176 aa		4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-GR1	Q12085	440 aa		4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.48	□□□□□ -1.69
HMRA2	YCR096C	TY1A-OL	Q92392	440 aa	Known RBP	4.48	□□□□□ -1.69
HMRA2	YCR096C	TPP1	Q03796	238 aa		4.47	□□□□□ -1.69
HMRA2	YCR096C	PNS1	Q12412	539 aa		4.47	□□□□□ -1.69
HMRA2	YCR096C	YLR358C	O13565	187 aa		4.45	□□□□□ -1.7
HMRA2	YCR096C	SAM35	P14693	329 aa		4.45	□□□□□ -1.7
HMRA2	YCR096C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
HMRA2	YCR096C	YPT53	P36019	220 aa		4.45	□□□□□ -1.7
HMRA2	YCR096C	NMD3	P38861	518 aa	Known RBP	4.45	□□□□□ -1.7
HMRA2	YCR096C	SNO2	P53823	222 aa		4.45	□□□□□ -1.7
HMRA2	YCR096C	ARL1	P38116	183 aa	Known RBP	4.44	□□□□□ -1.7
HMRA2	YCR096C	SAP155	P43612	1002 aa		4.44	□□□□□ -1.7
HMRA2	YCR096C	YHL012W	P38709	493 aa		4.43	□□□□□ -1.7
HMRA2	YCR096C	SSA4	P22202	642 aa	Known RBP	4.42	□□□□□ -1.7
HMRA2	YCR096C	SLS1	P42900	643 aa		4.42	□□□□□ -1.7
HMRA2	YCR096C	YAF9	P53930	226 aa		4.42	□□□□□ -1.7
HMRA2	YCR096C	FLP1	P03870	423 aa		4.41	□□□□□ -1.7
HMRA2	YCR096C	FOL2	P51601	243 aa	Known RBP	4.41	□□□□□ -1.7
HMRA2	YCR096C	NUT1	P53114	1132 aa		4.41	□□□□□ -1.7
HMRA2	YCR096C	YDR132C	Q03900	495 aa		4.41	□□□□□ -1.7
HMRA2	YCR096C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.4	□□□□□ -1.71	not detected
HMRA2	YCR096C	UFD2	P54860	961 aa		4.4	□□□□□ -1.71
HMRA2	YCR096C	YLR257W	Q06146	321 aa	Known RBP	4.4	□□□□□ -1.71
HMRA2	YCR096C	PMT7	Q06644	662 aa		4.4	□□□□□ -1.71
HMRA2	YCR096C	RET1	P22276	1149 aa	Known RBP	4.39	□□□□□ -1.71
HMRA2	YCR096C	AIM26	P32858	118 aa		4.39	□□□□□ -1.71
HMRA2	YCR096C	MDL2	P33311	773 aa		4.39	□□□□□ -1.71
HMRA2	YCR096C	EXO5	P38289	585 aa		4.39	□□□□□ -1.71
HMRA2	YCR096C	TAT2	P38967	592 aa		4.39	□□□□□ -1.71
HMRA2	YCR096C	DMA2	P53924	522 aa		4.39	□□□□□ -1.71
HMRA2	YCR096C	MCM5	P29496	775 aa	Known RBP	4.38	□□□□□ -1.71
HMRA2	YCR096C	SLI1	P53304	468 aa		4.38	□□□□□ -1.71
HMRA2	YCR096C	GLO3	P38682	493 aa	Known RBP	4.37	□□□□□ -1.71
HMRA2	YCR096C	NEM1	P38757	446 aa		4.37	□□□□□ -1.71
HMRA2	YCR096C	YAR028W	P39548	234 aa		4.37	□□□□□ -1.71
HMRA2	YCR096C	QDR1	P40475	563 aa		4.37	□□□□□ -1.71
HMRA2	YCR096C	SPT20	P50875	604 aa		4.37	□□□□□ -1.71
HMRA2	YCR096C	YNL011C	P53980	444 aa		4.37	□□□□□ -1.71
HMRA2	YCR096C	BSC2	Q05611	235 aa		4.37	□□□□□ -1.71
HMRA2	YCR096C	MNL2	Q12205	849 aa		4.37	□□□□□ -1.71
HMRA2	YCR096C	YKL077W	P36081	392 aa		4.36	□□□□□ -1.71
HMRA2	YCR096C	PUS9	Q12069	462 aa		4.36	□□□□□ -1.71
HMRA2	YCR096C	RSA3	Q05942	220 aa	Known RBP	4.35	□□□□□ -1.71
HMRA2	YCR096C	LAM1	P38851	1228 aa		4.34	□□□□□ -1.71
HMRA2	YCR096C	MEF2	P39677	819 aa		4.34	□□□□□ -1.71
HMRA2	YCR096C	RVS167	P39743	482 aa	Known RBP	4.34	□□□□□ -1.71
HMRA2	YCR096C	MON1	P53129	644 aa		4.34	□□□□□ -1.71
HMRA2	YCR096C	GCN5	Q03330	439 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms