RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C RPS24BP0CX32 135 aaKnown RBP1.89□□□□□ -2.11
MSH3YCR092C BIO2P32451 375 aa1.89□□□□□ -2.11
MSH3YCR092C YJL045WP47052 634 aa1.89□□□□□ -2.11
MSH3YCR092C NIS1P53939 407 aa1.89□□□□□ -2.11
MSH3YCR092C YMR265CQ03508 461 aaKnown RBP1.89□□□□□ -2.11
MSH3YCR092C RIF1P29539 1916 aa1.88□□□□□ -2.11
MSH3YCR092C DLD1P32891 587 aa1.88□□□□□ -2.11
MSH3YCR092C EAF6P47128 113 aa1.88□□□□□ -2.11
MSH3YCR092C YJR115WP47152 169 aa1.88□□□□□ -2.11
MSH3YCR092C CLF1Q12309 687 aaPredicted RBP1.88□□□□□ -2.11
MSH3YCR092C NSI1Q12457 570 aa1.88□□□□□ -2.11
MSH3YCR092C GUT2P32191 649 aa1.88□□□□□ -2.11
MSH3YCR092C RME1P32338 300 aaKnown RBP1.88□□□□□ -2.11
MSH3YCR092C HXT10P43581 546 aa1.88□□□□□ -2.11
MSH3YCR092C MPP10P47083 593 aaKnown RBP1.88□□□□□ -2.11
MSH3YCR092C SNU71P53207 620 aaKnown RBP1.88□□□□□ -2.11
MSH3YCR092C YLR225CQ05948 407 aaKnown RBP1.88□□□□□ -2.11
MSH3YCR092C YOL057WQ08225 711 aa1.88□□□□□ -2.11
MSH3YCR092C YDL176WQ12027 708 aa1.88□□□□□ -2.11
MSH3YCR092C CEM1P39525 442 aa1.87□□□□□ -2.11
MSH3YCR092C KIP3P53086 805 aaKnown RBP1.87□□□□□ -2.11
MSH3YCR092C DFG5Q05031 458 aa1.87□□□□□ -2.11
MSH3YCR092C PCL8Q08966 492 aa1.87□□□□□ -2.11
MSH3YCR092C RRG1Q12167 365 aaPredicted RBP1.87□□□□□ -2.11
MSH3YCR092C PDC1P06169 563 aaKnown RBP1.87□□□□□ -2.11
MSH3YCR092C AKL1P38080 1108 aaKnown RBP1.87□□□□□ -2.11
MSH3YCR092C UTP7P40055 554 aaKnown RBP1.87□□□□□ -2.11
MSH3YCR092C CSN12P47130 423 aa1.87□□□□□ -2.11
MSH3YCR092C GUD1Q07729 489 aa1.87□□□□□ -2.11
MSH3YCR092C NHA1Q99271 985 aa1.87□□□□□ -2.11
MSH3YCR092C TIF1P10081 395 aaKnown RBP1.87□□□□□ -2.11
MSH3YCR092C ESS1P22696 170 aa1.87□□□□□ -2.11
MSH3YCR092C HPC2Q01448 625 aa1.87□□□□□ -2.11
MSH3YCR092C TFB3Q03290 321 aa1.87□□□□□ -2.11
MSH3YCR092C DPH6Q12429 685 aa1.87□□□□□ -2.11
MSH3YCR092C SYN8P31377 255 aa1.86□□□□□ -2.11
MSH3YCR092C SSF1P38789 453 aaPredicted RBP1.86□□□□□ -2.11
MSH3YCR092C NMD2P38798 1089 aaKnown RBP1.86□□□□□ -2.11
MSH3YCR092C WHI4Q07655 649 aaKnown RBP1.86□□□□□ -2.11
MSH3YCR092C SPE3Q12074 293 aaKnown RBP1.86□□□□□ -2.11
MSH3YCR092C SEC8P32855 1065 aa1.86□□□□□ -2.11
MSH3YCR092C STB5P38699 743 aa1.86□□□□□ -2.11
MSH3YCR092C OSH3P38713 996 aaKnown RBP1.86□□□□□ -2.11
MSH3YCR092C VAB2P40003 282 aa1.86□□□□□ -2.11
MSH3YCR092C RPA14P50106 137 aa1.86□□□□□ -2.11
MSH3YCR092C FAR11P53917 953 aa1.86□□□□□ -2.11
MSH3YCR092C SKY1Q03656 742 aa1.86□□□□□ -2.11
MSH3YCR092C TEC1P18412 486 aa1.85□□□□□ -2.11
MSH3YCR092C KRE2P27809 442 aa1.85□□□□□ -2.11
MSH3YCR092C SMY1P32364 656 aaKnown RBP1.85□□□□□ -2.11
MSH3YCR092C ERG7P38604 731 aa1.85□□□□□ -2.11
MSH3YCR092C GPB2P39717 880 aa1.85□□□□□ -2.11
MSH3YCR092C FIR1P40020 876 aa1.85□□□□□ -2.11
MSH3YCR092C LSB6P42951 607 aa1.85□□□□□ -2.11
MSH3YCR092C NUP85P46673 744 aa1.85□□□□□ -2.11
MSH3YCR092C HEF3P53978 1044 aaKnown RBP1.85□□□□□ -2.11
MSH3YCR092C YPR097WQ06839 1073 aa1.85□□□□□ -2.11
MSH3YCR092C TY1B-AO13527 1196 aaKnown RBP1.85□□□□□ -2.11
MSH3YCR092C TRM1P15565 570 aaKnown RBP1.85□□□□□ -2.11
MSH3YCR092C COQ2P32378 372 aa1.85□□□□□ -2.11
MSH3YCR092C ATG14P38270 344 aa1.85□□□□□ -2.11
MSH3YCR092C BUB1P41695 1021 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
MSH3YCR092C YGR130CP53278 816 aa1.85□□□□□ -2.11
MSH3YCR092C SOL4P53315 255 aa1.85□□□□□ -2.11
MSH3YCR092C HST2P53686 357 aa1.85□□□□□ -2.11
MSH3YCR092C ZDS2P54786 942 aa1.85□□□□□ -2.11
MSH3YCR092C YPL034WQ03083 165 aa1.85□□□□□ -2.11
MSH3YCR092C SUB2Q07478 446 aaKnown RBP1.85□□□□□ -2.11
MSH3YCR092C PPM2Q08282 695 aa1.85□□□□□ -2.11
MSH3YCR092C MRT4P33201 236 aaKnown RBP1.85□□□□□ -2.11
MSH3YCR092C ACO2P39533 789 aa1.85□□□□□ -2.11
MSH3YCR092C ICP55P40051 511 aa1.85□□□□□ -2.11
MSH3YCR092C NSG2P53898 299 aa1.85□□□□□ -2.11
MSH3YCR092C STE20Q03497 939 aaKnown RBP1.85□□□□□ -2.11
MSH3YCR092C WRS1Q12109 432 aaKnown RBP1.85□□□□□ -2.11
MSH3YCR092C MDM20Q12387 796 aaKnown RBP1.85□□□□□ -2.11
MSH3YCR092C KAR2P16474 682 aaKnown RBP1.84□□□□□ -2.11
MSH3YCR092C PKC1P24583 1151 aa1.84□□□□□ -2.11
MSH3YCR092C UTR2P32623 467 aa1.84□□□□□ -2.11
MSH3YCR092C AFG2P32794 780 aa1.84□□□□□ -2.11
MSH3YCR092C SNF7P39929 240 aaKnown RBP1.84□□□□□ -2.11
MSH3YCR092C LYS14P40971 790 aa1.84□□□□□ -2.11
MSH3YCR092C CWH41P53008 833 aa1.84□□□□□ -2.11
MSH3YCR092C MOT1P32333 1867 aa1.84□□□□□ -2.12
MSH3YCR092C SCJ1P25303 377 aa1.84□□□□□ -2.12
MSH3YCR092C RGT1P32862 1170 aa1.84□□□□□ -2.12
MSH3YCR092C BUD27P43573 796 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
MSH3YCR092C YPP1P46951 817 aa1.84□□□□□ -2.12
MSH3YCR092C PRP42Q03776 544 aaKnown RBP1.84□□□□□ -2.12
MSH3YCR092C YOR352WQ08816 343 aa1.84□□□□□ -2.12
MSH3YCR092C RPP1AP05318 106 aaPredicted RBP1.83□□□□□ -2.12
MSH3YCR092C KIN1P13185 1064 aa1.83□□□□□ -2.12
MSH3YCR092C SNA3P14359 133 aa1.83□□□□□ -2.12
MSH3YCR092C IDI1P15496 288 aa1.83□□□□□ -2.12
MSH3YCR092C MET1P36150 593 aa1.83□□□□□ -2.12
MSH3YCR092C FKS1P38631 1876 aaKnown RBP1.83□□□□□ -2.12
MSH3YCR092C OPT2Q06593 877 aa1.83□□□□□ -2.12
MSH3YCR092C SWI1P09547 1314 aa1.83□□□□□ -2.12
MSH3YCR092C CDC60P26637 1090 aaKnown RBP1.83□□□□□ -2.12
MSH3YCR092C GRS1P38088 690 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms