RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	YKL077W	P36081	392 aa		6.53	□□□□□ -1.36
APA1	YCL050C	UTP22	P53254	1237 aa	Predicted RBP	6.53	□□□□□ -1.36
APA1	YCL050C	YIG1	Q08956	461 aa		6.53	□□□□□ -1.36
APA1	YCL050C	SQT1	P35184	431 aa		6.52	□□□□□ -1.37
APA1	YCL050C	RSM26	P47141	266 aa		6.52	□□□□□ -1.37
APA1	YCL050C	GCV1	P48015	400 aa		6.52	□□□□□ -1.37
APA1	YCL050C	KIP3	P53086	805 aa	Known RBP	6.52	□□□□□ -1.37
APA1	YCL050C	YPL034W	Q03083	165 aa		6.52	□□□□□ -1.37
APA1	YCL050C	ATE1	P16639	503 aa		6.51	□□□□□ -1.37
APA1	YCL050C	ULP1	Q02724	621 aa		6.51	□□□□□ -1.37
APA1	YCL050C	COQ2	P32378	372 aa		6.5	□□□□□ -1.37
APA1	YCL050C	UGA4	P32837	571 aa		6.5	□□□□□ -1.37
APA1	YCL050C	PEX13	P80667	386 aa		6.5	□□□□□ -1.37
APA1	YCL050C	YOR223W	Q12015	292 aa		6.5	□□□□□ -1.37
APA1	YCL050C	FAA3	P39002	694 aa		6.49	□□□□□ -1.37
APA1	YCL050C	MEC3	Q02574	474 aa		6.49	□□□□□ -1.37
APA1	YCL050C	TOS4	Q06266	489 aa		6.49	□□□□□ -1.37
APA1	YCL050C	REC8	Q12188	680 aa		6.49	□□□□□ -1.37
APA1	YCL050C	SBP1	P10080	294 aa	Known RBP	6.48	□□□□□ -1.37
APA1	YCL050C	REI1	P38344	393 aa	Predicted RBP	6.48	□□□□□ -1.37
APA1	YCL050C	AKR1	P39010	764 aa		6.48	□□□□□ -1.37
APA1	YCL050C	NCE103	P53615	221 aa		6.48	□□□□□ -1.37
APA1	YCL050C	YGR122W	P53272	402 aa		6.47	□□□□□ -1.37
APA1	YCL050C	NOG1	Q02892	647 aa	Known RBP	6.47	□□□□□ -1.37
APA1	YCL050C	HXK1	P04806	485 aa	Known RBP	6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-DR6	P0CX70	440 aa		6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-ER1	P0CX71	440 aa		6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-LR2	P0CX72	440 aa		6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-PL	P0CX73	440 aa		6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-JR1	P0CX74	440 aa		6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-LR3	P0CX75	440 aa		6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-ML2	P0CX76	440 aa		6.46	□□□□□ -1.38
APA1	YCL050C	MSH3	P25336	1018 aa		6.46	□□□□□ -1.38
APA1	YCL050C	ATG14	P38270	344 aa		6.46	□□□□□ -1.38
APA1	YCL050C	EXO5	P38289	585 aa		6.46	□□□□□ -1.38
APA1	YCL050C	RPS26A	P39938	119 aa	Known RBP	6.46	□□□□□ -1.38
APA1	YCL050C	RPS26B	P39939	119 aa	Known RBP	6.46	□□□□□ -1.38
APA1	YCL050C	ADI1	Q03677	179 aa		6.46	□□□□□ -1.38
APA1	YCL050C	DOT1	Q04089	582 aa	Known RBP	6.46	□□□□□ -1.38
APA1	YCL050C	ALG6	Q12001	544 aa	Known RBP	6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-GR1	Q12085	440 aa		6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.46	□□□□□ -1.38
APA1	YCL050C	TY1A-OL	Q92392	440 aa	Known RBP	6.46	□□□□□ -1.38
APA1	YCL050C	ARL1	P38116	183 aa	Known RBP	6.45	□□□□□ -1.38
APA1	YCL050C	MRPS18	P42847	217 aa		6.45	□□□□□ -1.38
APA1	YCL050C	MTR4	P47047	1073 aa	Known RBP	6.45	□□□□□ -1.38
APA1	YCL050C	YJR107W	P47145	328 aa		6.45	□□□□□ -1.38
APA1	YCL050C	YPL109C	Q02981	657 aa		6.45	□□□□□ -1.38
APA1	YCL050C	RRP15	Q06511	250 aa	Predicted RBP	6.45	□□□□□ -1.38
APA1	YCL050C	AVO1	Q08236	1176 aa		6.45	□□□□□ -1.38
APA1	YCL050C	PRE9	P23638	258 aa	Known RBP	6.44	□□□□□ -1.38
APA1	YCL050C	MCM2	P29469	868 aa		6.44	□□□□□ -1.38
APA1	YCL050C	NAM7	P30771	971 aa	Known RBP	6.44	□□□□□ -1.38
APA1	YCL050C	SEC8	P32855	1065 aa		6.44	□□□□□ -1.38
APA1	YCL050C	SAF1	P38352	637 aa		6.44	□□□□□ -1.38
APA1	YCL050C	PEX28	P38848	579 aa		6.44	□□□□□ -1.38
APA1	YCL050C	GIC2	Q06648	383 aa		6.44	□□□□□ -1.38
APA1	YCL050C	MCD1	Q12158	566 aa		6.44	□□□□□ -1.38
APA1	YCL050C	RAD2	P07276	1031 aa		6.43	□□□□□ -1.38
APA1	YCL050C	CHS2	P14180	963 aa		6.43	□□□□□ -1.38
APA1	YCL050C	PEP7	P32609	515 aa		6.43	□□□□□ -1.38
APA1	YCL050C	PGM1	P33401	570 aa	Known RBP	6.43	□□□□□ -1.38
APA1	YCL050C	KAE1	P36132	386 aa		6.43	□□□□□ -1.38
APA1	YCL050C	GPT2	P36148	743 aa		6.43	□□□□□ -1.38
APA1	YCL050C	SLS1	P42900	643 aa		6.43	□□□□□ -1.38
APA1	YCL050C	OYE2	Q03558	400 aa	Known RBP	6.43	□□□□□ -1.38
APA1	YCL050C	CYC8	P14922	966 aa		6.42	□□□□□ -1.38
APA1	YCL050C	FYV10	P40492	516 aa		6.42	□□□□□ -1.38
APA1	YCL050C	SPR28	Q04921	423 aa		6.42	□□□□□ -1.38
APA1	YCL050C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.42	□□□□□ -1.38	not detected
APA1	YCL050C	VMA4	P22203	233 aa	Known RBP	6.41	□□□□□ -1.38
APA1	YCL050C	ELA1	P53861	379 aa	Predicted RBP	6.41	□□□□□ -1.38
APA1	YCL050C	NEM1	P38757	446 aa		6.4	□□□□□ -1.38
APA1	YCL050C	YLR122C	Q12312	125 aa		6.4	□□□□□ -1.38
APA1	YCL050C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.39	□□□□□ -1.39	not detected
APA1	YCL050C	XKS1	P42826	600 aa		6.39	□□□□□ -1.39
APA1	YCL050C	SPO74	P45819	413 aa		6.39	□□□□□ -1.39
APA1	YCL050C	YGL140C	P53120	1219 aa		6.39	□□□□□ -1.39
APA1	YCL050C	YGR045C	P53229	120 aa		6.39	□□□□□ -1.39
APA1	YCL050C	UTP5	Q04177	643 aa	Known RBP	6.39	□□□□□ -1.39
APA1	YCL050C	ESF1	Q06344	628 aa	Known RBP	6.39	□□□□□ -1.39
APA1	YCL050C	YAR028W	P39548	234 aa		6.38	□□□□□ -1.39
APA1	YCL050C	PIC2	P40035	300 aa		6.38	□□□□□ -1.39
APA1	YCL050C	YNR063W	P53749	607 aa		6.38	□□□□□ -1.39
APA1	YCL050C	LAP2	Q10740	671 aa		6.38	□□□□□ -1.39
APA1	YCL050C	HSE1	P38753	452 aa		6.37	□□□□□ -1.39
APA1	YCL050C	MSH4	P40965	878 aa	Predicted RBP	6.37	□□□□□ -1.39
APA1	YCL050C	MMM1	P41800	426 aa		6.37	□□□□□ -1.39
APA1	YCL050C	YGR130C	P53278	816 aa		6.37	□□□□□ -1.39
APA1	YCL050C	SEC23	P15303	768 aa	Known RBP	6.36	□□□□□ -1.39
APA1	YCL050C	MSB1	P21339	1137 aa	Known RBP	6.36	□□□□□ -1.39
APA1	YCL050C	NFS1	P25374	497 aa		6.36	□□□□□ -1.39
APA1	YCL050C	NNK1	P36003	928 aa		6.36	□□□□□ -1.39
APA1	YCL050C	DED1	P06634	604 aa	Known RBP	6.35	□□□□□ -1.39
APA1	YCL050C	RPS4A	P0CX35	261 aa	Known RBP	6.35	□□□□□ -1.39
APA1	YCL050C	RPS4B	P0CX36	261 aa	Known RBP	6.35	□□□□□ -1.39
APA1	YCL050C	SMY2	P32909	740 aa	Known RBP	6.35	□□□□□ -1.39
APA1	YCL050C	ADD66	P36040	267 aa		6.35	□□□□□ -1.39
APA1	YCL050C	CIT3	P43635	486 aa		6.35	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 104.2 ms