RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W YIG1Q08956 461 aa7.41□□□□□ -1.22
RER1YCL001W YPK9Q12697 1472 aa7.41□□□□□ -1.22
RER1YCL001W PRP5P21372 849 aaPredicted RBP7.4□□□□□ -1.22
RER1YCL001W DUR3P33413 735 aa7.4□□□□□ -1.22
RER1YCL001W ECM2P38241 364 aaKnown RBP7.4□□□□□ -1.22
RER1YCL001W YMR074CQ04773 145 aa7.4□□□□□ -1.22
RER1YCL001W YLL054CQ12244 843 aa7.4□□□□□ -1.22
RER1YCL001W HTS1P07263 546 aaKnown RBP7.39□□□□□ -1.23
RER1YCL001W CDC55Q00362 526 aa7.39□□□□□ -1.23
RER1YCL001W BSC2Q05611 235 aa7.39□□□□□ -1.23
RER1YCL001W CDC3P32457 520 aaKnown RBP7.38□□□□□ -1.23
RER1YCL001W AVT1P47082 602 aa7.38□□□□□ -1.23
RER1YCL001W MYO2P19524 1574 aaKnown RBP7.37□□□□□ -1.23
RER1YCL001W FLP1P03870 423 aa7.37□□□□□ -1.23
RER1YCL001W SAP155P43612 1002 aa7.37□□□□□ -1.23
RER1YCL001W SCC2Q04002 1493 aa7.36□□□□□ -1.23
RER1YCL001W GPT2P36148 743 aa7.36□□□□□ -1.23
RER1YCL001W DOT1Q04089 582 aaKnown RBP7.36□□□□□ -1.23
RER1YCL001W UFD4P33202 1483 aa7.36□□□□□ -1.23
RER1YCL001W GRS1P38088 690 aaKnown RBP7.35□□□□□ -1.23
RER1YCL001W MMM1P41800 426 aa7.35□□□□□ -1.23
RER1YCL001W YCF1P39109 1515 aaKnown RBP7.35□□□□□ -1.23
RER1YCL001W RPO31P04051 1460 aa7.35□□□□□ -1.23
RER1YCL001W ELM1P32801 640 aa7.34□□□□□ -1.23
RER1YCL001W GEF1P37020 779 aa7.34□□□□□ -1.23
RER1YCL001W YHL008CP38750 627 aa7.34□□□□□ -1.23
RER1YCL001W ERP5P38819 212 aa7.34□□□□□ -1.23
RER1YCL001W MDJ2P42834 146 aa7.34□□□□□ -1.23
RER1YCL001W MEC3Q02574 474 aa7.34□□□□□ -1.23
RER1YCL001W GCD1P09032 578 aaPredicted RBP7.33□□□□□ -1.24
RER1YCL001W CIT3P43635 486 aa7.33□□□□□ -1.24
RER1YCL001W UTP22P53254 1237 aaPredicted RBP7.33□□□□□ -1.24
RER1YCL001W AOS1Q06624 347 aa7.33□□□□□ -1.24
RER1YCL001W PMT7Q06644 662 aa7.33□□□□□ -1.24
RER1YCL001W WHI3P34761 661 aaKnown RBP7.32□□□□□ -1.24
RER1YCL001W SEA4P38164 1038 aa7.32□□□□□ -1.24
RER1YCL001W NUT1P53114 1132 aa7.32□□□□□ -1.24
RER1YCL001W SDH1Q00711 640 aa7.32□□□□□ -1.24
RER1YCL001W YBL113CQ7M4S9 792 aa7.32□□□□□ -1.24
RER1YCL001W YOR059CQ08448 450 aaKnown RBP7.31□□□□□ -1.24
RER1YCL001W YAF9P53930 226 aa7.3□□□□□ -1.24
RER1YCL001W FRT1Q99332 602 aa7.3□□□□□ -1.24
RER1YCL001W REI1P38344 393 aaPredicted RBP7.29□□□□□ -1.24
RER1YCL001W NUT2Q06213 157 aa7.29□□□□□ -1.24
RER1YCL001W GPI13Q07830 1017 aa7.29□□□□□ -1.24
RER1YCL001W INP54Q08227 384 aaKnown RBP7.29□□□□□ -1.24
RER1YCL001W NSI1Q12457 570 aa7.29□□□□□ -1.24
RER1YCL001W RCM1P53972 490 aa7.28□□□□□ -1.24
RER1YCL001W ARL1P38116 183 aaKnown RBP7.27□□□□□ -1.25
RER1YCL001W MSH4P40965 878 aaPredicted RBP7.27□□□□□ -1.25
RER1YCL001W ALG6Q12001 544 aaKnown RBP7.27□□□□□ -1.25
RER1YCL001W HAT1Q12341 374 aa7.27□□□□□ -1.25
RER1YCL001W RPS4AP0CX35 261 aaKnown RBP7.26□□□□□ -1.25
RER1YCL001W RPS4BP0CX36 261 aaKnown RBP7.26□□□□□ -1.25
RER1YCL001W RVS167P39743 482 aaKnown RBP7.26□□□□□ -1.25
RER1YCL001W ALT1P52893 592 aa7.26□□□□□ -1.25
RER1YCL001W NOC3Q07896 663 aaPredicted RBP7.26□□□□□ -1.25
RER1YCL001W TY1A-LR4P0C2I8 440 aaKnown RBP7.25□□□□□ -1.25
RER1YCL001W TY1A-DR6P0CX70 440 aa7.25□□□□□ -1.25
RER1YCL001W TY1A-ER1P0CX71 440 aa7.25□□□□□ -1.25
RER1YCL001W TY1A-LR2P0CX72 440 aa7.25□□□□□ -1.25
RER1YCL001W TY1A-PLP0CX73 440 aa7.25□□□□□ -1.25
RER1YCL001W TY1A-JR1P0CX74 440 aa7.25□□□□□ -1.25
RER1YCL001W TY1A-LR3P0CX75 440 aa7.25□□□□□ -1.25
RER1YCL001W TY1A-ML2P0CX76 440 aa7.25□□□□□ -1.25
RER1YCL001W MCM5P29496 775 aaKnown RBP7.25□□□□□ -1.25
RER1YCL001W OYE3P41816 400 aaPredicted RBP7.25□□□□□ -1.25
RER1YCL001W SAM37P50110 327 aa7.25□□□□□ -1.25
RER1YCL001W TY1A-GR1Q12085 440 aa7.25□□□□□ -1.25
RER1YCL001W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.25□□□□□ -1.25
RER1YCL001W TY1A-OLQ92392 440 aaKnown RBP7.25□□□□□ -1.25
RER1YCL001W CHD1P32657 1468 aa7.24□□□□□ -1.25
RER1YCL001W LRG1P35688 1017 aa7.24□□□□□ -1.25
RER1YCL001W TOP2P06786 1428 aaKnown RBP7.24□□□□□ -1.25
RER1YCL001W ECL1P48235 211 aa7.23□□□□□ -1.25
RER1YCL001W MON1P53129 644 aa7.23□□□□□ -1.25
RER1YCL001W YGR045CP53229 120 aa7.23□□□□□ -1.25
RER1YCL001W CDC25P04821 1589 aa7.22□□□□□ -1.25
RER1YCL001W SMY2P32909 740 aaKnown RBP7.22□□□□□ -1.25
RER1YCL001W POL12P38121 705 aaPredicted RBP7.22□□□□□ -1.25
RER1YCL001W CIC1P38779 376 aaKnown RBP7.22□□□□□ -1.25
RER1YCL001W DFG16Q99234 619 aa7.22□□□□□ -1.25
RER1YCL001W TY2B-LR1P0C2J3 1770 aa7.22□□□□□ -1.25
RER1YCL001W TY2B-FP0CX63 1770 aa7.22□□□□□ -1.25
RER1YCL001W TY2B-GR2P0CX64 1770 aa7.22□□□□□ -1.25
RER1YCL001W TY2B-CP25384 1770 aa7.22□□□□□ -1.25
RER1YCL001W TY2B-DR2Q03494 1770 aa7.22□□□□□ -1.25
RER1YCL001W TY1B-DR1Q03855 1755 aa7.22□□□□□ -1.25
RER1YCL001W TY2B-DR3Q07791 1770 aaKnown RBP7.22□□□□□ -1.25
RER1YCL001W TY2B-OR1Q12113 1770 aa7.22□□□□□ -1.25
RER1YCL001W TY2B-DR1Q12472 1770 aa7.22□□□□□ -1.25
RER1YCL001W TY2B-OR2Q12501 1770 aa7.22□□□□□ -1.25
RER1YCL001W POL1P13382 1468 aa7.22□□□□□ -1.25
RER1YCL001W SEG2P34250 1132 aa7.21□□□□□ -1.26
RER1YCL001W EXO5P38289 585 aa7.21□□□□□ -1.26
RER1YCL001W ELA1P53861 379 aaPredicted RBP7.21□□□□□ -1.26
RER1YCL001W EAR1Q03212 550 aa7.21□□□□□ -1.26
RER1YCL001W NFS1P25374 497 aa7.2□□□□□ -1.26
RER1YCL001W YKL077WP36081 392 aa7.2□□□□□ -1.26
RER1YCL001W SHU2P38957 223 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms