RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C NPT1P39683 429 aaKnown RBP3.19□□□□□ -1.9
RIF1YBR275C SAH1P39954 449 aaKnown RBP3.19□□□□□ -1.9
RIF1YBR275C ARF3P40994 183 aaRIP-Chip data3.19□□□□□ -1.9not detected
RIF1YBR275C COS5P47187 383 aa3.19□□□□□ -1.9
RIF1YBR275C TUM1Q08686 304 aaKnown RBP3.19□□□□□ -1.9
RIF1YBR275C SKG6P32900 734 aaPredicted RBP3.19□□□□□ -1.9
RIF1YBR275C KTR4P38131 464 aa3.19□□□□□ -1.9
RIF1YBR275C YMR124WP39523 943 aaKnown RBP3.19□□□□□ -1.9
RIF1YBR275C YJR079WP47126 109 aa3.19□□□□□ -1.9
RIF1YBR275C ASE1P50275 885 aa3.19□□□□□ -1.9
RIF1YBR275C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
RIF1YBR275C BDF2Q07442 638 aa3.19□□□□□ -1.9
RIF1YBR275C CMS1Q07897 291 aaKnown RBP3.19□□□□□ -1.9
RIF1YBR275C LAP2Q10740 671 aa3.19□□□□□ -1.9
RIF1YBR275C MTF2P10849 440 aa3.18□□□□□ -1.9
RIF1YBR275C SNA3P14359 133 aa3.18□□□□□ -1.9
RIF1YBR275C SHM1P37292 490 aaPredicted RBP3.18□□□□□ -1.9
RIF1YBR275C YBL028CP38202 106 aa3.18□□□□□ -1.9
RIF1YBR275C PMT3P47190 753 aa3.18□□□□□ -1.9
RIF1YBR275C SPO1P53541 631 aa3.18□□□□□ -1.9
RIF1YBR275C HMO1Q03973 246 aaKnown RBP3.18□□□□□ -1.9
RIF1YBR275C HRQ1Q05549 1077 aa3.18□□□□□ -1.9
RIF1YBR275C REI1P38344 393 aaPredicted RBP3.18□□□□□ -1.9
RIF1YBR275C GLO3P38682 493 aaKnown RBP3.18□□□□□ -1.9
RIF1YBR275C TEA1P47988 759 aa3.18□□□□□ -1.9
RIF1YBR275C YML083CQ04526 418 aa3.18□□□□□ -1.9
RIF1YBR275C BMS1Q08965 1183 aaKnown RBP3.18□□□□□ -1.9
RIF1YBR275C SEC39Q12745 709 aa3.18□□□□□ -1.9
RIF1YBR275C GCD1P09032 578 aaPredicted RBP3.18□□□□□ -1.9
RIF1YBR275C DAL7P21826 554 aa3.18□□□□□ -1.9
RIF1YBR275C CDC3P32457 520 aaKnown RBP3.18□□□□□ -1.9
RIF1YBR275C GCG1P32656 232 aaKnown RBP3.18□□□□□ -1.9
RIF1YBR275C FMP23P38231 175 aa3.18□□□□□ -1.9
RIF1YBR275C VPS29P38759 282 aa3.18□□□□□ -1.9
RIF1YBR275C NOC2P39744 710 aaKnown RBP3.18□□□□□ -1.9
RIF1YBR275C DBP6P53734 629 aaKnown RBP3.18□□□□□ -1.9
RIF1YBR275C LCD1Q04377 747 aa3.18□□□□□ -1.9
RIF1YBR275C SSP2Q08646 371 aa3.18□□□□□ -1.9
RIF1YBR275C VPS5Q92331 675 aa3.18□□□□□ -1.9
RIF1YBR275C TRP2P00899 507 aaKnown RBP3.18□□□□□ -1.9
RIF1YBR275C TIM23P32897 222 aa3.18□□□□□ -1.9
RIF1YBR275C BOI2P39969 1040 aa3.18□□□□□ -1.9
RIF1YBR275C UTP25P40498 721 aaKnown RBP3.18□□□□□ -1.9
RIF1YBR275C CNM67P53865 581 aaKnown RBP3.18□□□□□ -1.9
RIF1YBR275C PSY3Q12318 242 aa3.18□□□□□ -1.9
RIF1YBR275C IFA38P38286 347 aa3.17□□□□□ -1.9
RIF1YBR275C ALD5P40047 520 aaKnown RBP3.17□□□□□ -1.9
RIF1YBR275C MRPS18P42847 217 aa3.17□□□□□ -1.9
RIF1YBR275C CIR1P42940 261 aa3.17□□□□□ -1.9
RIF1YBR275C EFM6P53970 246 aa3.17□□□□□ -1.9
RIF1YBR275C ECI1Q05871 280 aa3.17□□□□□ -1.9
RIF1YBR275C TGL5Q12043 749 aa3.17□□□□□ -1.9
RIF1YBR275C YDR061WQ12298 539 aa3.17□□□□□ -1.9
RIF1YBR275C KNS1P32350 737 aaPredicted RBP3.17□□□□□ -1.9
RIF1YBR275C PCM1P38628 557 aaKnown RBP3.17□□□□□ -1.9
RIF1YBR275C TIM10P87108 93 aa3.17□□□□□ -1.9
RIF1YBR275C CTR9P89105 1077 aa3.17□□□□□ -1.9
RIF1YBR275C INP2Q03824 705 aa3.17□□□□□ -1.9
RIF1YBR275C PEX19Q07418 342 aa3.17□□□□□ -1.9
RIF1YBR275C MIP1P15801 1254 aa3.17□□□□□ -1.9
RIF1YBR275C MRC1P25588 1096 aa3.17□□□□□ -1.9
RIF1YBR275C YKL050CP35736 922 aa3.17□□□□□ -1.9
RIF1YBR275C VPS51P36116 164 aa3.17□□□□□ -1.9
RIF1YBR275C MSS4P38994 779 aa3.17□□□□□ -1.9
RIF1YBR275C SSY5P47002 699 aa3.17□□□□□ -1.9
RIF1YBR275C YMR1P47147 688 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
RIF1YBR275C GAS4Q08271 471 aa3.17□□□□□ -1.9
RIF1YBR275C LSO1Q3E827 93 aa3.17□□□□□ -1.9
RIF1YBR275C LTE1P07866 1435 aa3.17□□□□□ -1.9
RIF1YBR275C HIS4P00815 799 aaKnown RBP3.17□□□□□ -1.9
RIF1YBR275C ERG12P07277 443 aa3.17□□□□□ -1.9
RIF1YBR275C KSS1P14681 368 aa3.17□□□□□ -1.9
RIF1YBR275C RAD53P22216 821 aa3.17□□□□□ -1.9
RIF1YBR275C HEM3P28789 327 aa3.17□□□□□ -1.9
RIF1YBR275C YKL091CP33324 310 aaKnown RBP3.17□□□□□ -1.9
RIF1YBR275C MAF1P41910 395 aa3.17□□□□□ -1.9
RIF1YBR275C THI12P42883 340 aa3.17□□□□□ -1.9
RIF1YBR275C CCT7P42943 550 aaKnown RBP3.17□□□□□ -1.9
RIF1YBR275C THI5P43534 340 aa3.17□□□□□ -1.9
RIF1YBR275C MDE1P47095 244 aa3.17□□□□□ -1.9
RIF1YBR275C THI11P47183 340 aa3.17□□□□□ -1.9
RIF1YBR275C UFD2P54860 961 aa3.17□□□□□ -1.9
RIF1YBR275C VTA1Q06263 330 aa3.17□□□□□ -1.9
RIF1YBR275C THI13Q07748 340 aa3.17□□□□□ -1.9
RIF1YBR275C SMC5Q08204 1093 aa3.17□□□□□ -1.9
RIF1YBR275C YRR1Q12172 810 aa3.17□□□□□ -1.9
RIF1YBR275C RGT2Q12300 763 aa3.17□□□□□ -1.9
RIF1YBR275C ATP4P05626 244 aa3.17□□□□□ -1.9
RIF1YBR275C UGA3P26370 528 aa3.17□□□□□ -1.9
RIF1YBR275C SEG2P34250 1132 aa3.17□□□□□ -1.9
RIF1YBR275C SDA1P53313 767 aaKnown RBP3.17□□□□□ -1.9
RIF1YBR275C GEA2P39993 1459 aaKnown RBP3.16□□□□□ -1.9
RIF1YBR275C PDE1P22434 369 aa3.16□□□□□ -1.9
RIF1YBR275C FUB1P25659 250 aa3.16□□□□□ -1.9
RIF1YBR275C OCT1P35999 772 aa3.16□□□□□ -1.9
RIF1YBR275C EXO84P38261 753 aa3.16□□□□□ -1.9
RIF1YBR275C TSL1P38427 1098 aaKnown RBP3.16□□□□□ -1.9
RIF1YBR275C PES4P39684 611 aa3.16□□□□□ -1.9
RIF1YBR275C SEO1P39709 593 aa3.16□□□□□ -1.9
RIF1YBR275C RTT105P40063 208 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 86.2 ms