RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W ISR1Q06098 443 aaKnown RBP6.98□□□□□ -1.29
SHM1YBR263W SPT5P27692 1063 aaKnown RBP6.97□□□□□ -1.29
SHM1YBR263W ERT1P38140 529 aa6.97□□□□□ -1.29
SHM1YBR263W YBL036CP38197 257 aa6.97□□□□□ -1.29
SHM1YBR263W FUN12P39730 1002 aaKnown RBP6.97□□□□□ -1.29
SHM1YBR263W YPP1P46951 817 aa6.97□□□□□ -1.29
SHM1YBR263W FCP1Q03254 732 aa6.97□□□□□ -1.29
SHM1YBR263W CSI1Q04368 295 aa6.97□□□□□ -1.29
SHM1YBR263W SPT2P06843 333 aaPredicted RBP6.96□□□□□ -1.3
SHM1YBR263W YDJ1P25491 409 aaKnown RBP6.96□□□□□ -1.3
SHM1YBR263W SWC3P31376 625 aa6.96□□□□□ -1.3
SHM1YBR263W RAD24P32641 659 aa6.96□□□□□ -1.3
SHM1YBR263W MDJ1P35191 511 aa6.96□□□□□ -1.3
SHM1YBR263W PFF1P38244 976 aa6.96□□□□□ -1.3
SHM1YBR263W PKH1Q03407 766 aa6.96□□□□□ -1.3
SHM1YBR263W BDF2Q07442 638 aa6.96□□□□□ -1.3
SHM1YBR263W HAT1Q12341 374 aa6.96□□□□□ -1.3
SHM1YBR263W YKL222CP35995 705 aa6.95□□□□□ -1.3
SHM1YBR263W CWH41P53008 833 aa6.95□□□□□ -1.3
SHM1YBR263W DIB1Q06819 143 aaPredicted RBP6.95□□□□□ -1.3
SHM1YBR263W SSK22P25390 1331 aaPredicted RBP6.95□□□□□ -1.3
SHM1YBR263W CTT1P06115 562 aa6.94□□□□□ -1.3
SHM1YBR263W RAD2P07276 1031 aa6.94□□□□□ -1.3
SHM1YBR263W RPS19AP07280 144 aaKnown RBP6.94□□□□□ -1.3
SHM1YBR263W RPS19BP07281 144 aaPredicted RBP6.94□□□□□ -1.3
SHM1YBR263W SMY1P32364 656 aaKnown RBP6.94□□□□□ -1.3
SHM1YBR263W SLA1P32790 1244 aa6.94□□□□□ -1.3
SHM1YBR263W SSN3P39073 555 aa6.94□□□□□ -1.3
SHM1YBR263W KIN4Q01919 800 aa6.94□□□□□ -1.3
SHM1YBR263W NOP8Q08287 484 aaPredicted RBP6.94□□□□□ -1.3
SHM1YBR263W PUS1Q12211 544 aaKnown RBP6.94□□□□□ -1.3
SHM1YBR263W CAF20P12962 161 aaKnown RBP6.93□□□□□ -1.3
SHM1YBR263W DAT1P13483 248 aaKnown RBP6.93□□□□□ -1.3
SHM1YBR263W UTR2P32623 467 aa6.93□□□□□ -1.3
SHM1YBR263W ITC1P53125 1264 aa6.93□□□□□ -1.3
SHM1YBR263W SSA1P10591 642 aaKnown RBP6.92□□□□□ -1.3
SHM1YBR263W HAL5P38970 855 aaKnown RBP6.92□□□□□ -1.3
SHM1YBR263W BOI2P39969 1040 aa6.92□□□□□ -1.3
SHM1YBR263W UBP15P50101 1230 aa6.92□□□□□ -1.3
SHM1YBR263W UBP16Q02863 499 aa6.92□□□□□ -1.3
SHM1YBR263W ERO1Q03103 563 aa6.92□□□□□ -1.3
SHM1YBR263W IRC3Q06683 689 aa6.92□□□□□ -1.3
SHM1YBR263W BRL1P38770 471 aa6.92□□□□□ -1.3
SHM1YBR263W CEM1P39525 442 aa6.92□□□□□ -1.3
SHM1YBR263W UBP12P39538 1254 aa6.92□□□□□ -1.3
SHM1YBR263W TFB3Q03290 321 aa6.92□□□□□ -1.3
SHM1YBR263W SYF1Q04048 859 aaPredicted RBP6.92□□□□□ -1.3
SHM1YBR263W TY1A-DR3Q12441 440 aa6.92□□□□□ -1.3
SHM1YBR263W PKC1P24583 1151 aa6.91□□□□□ -1.3
SHM1YBR263W YER156CP40093 338 aaKnown RBP6.91□□□□□ -1.3
SHM1YBR263W PSH1Q12161 406 aa6.91□□□□□ -1.3
SHM1YBR263W FRD1P32614 470 aaKnown RBP6.9□□□□□ -1.31
SHM1YBR263W SAC3P46674 1301 aa6.9□□□□□ -1.31
SHM1YBR263W DIT1P21623 536 aa6.89□□□□□ -1.31
SHM1YBR263W YNG2P38806 282 aaKnown RBP6.89□□□□□ -1.31
SHM1YBR263W YFL066CP43538 392 aa6.89□□□□□ -1.31
SHM1YBR263W LSB3P43603 459 aaKnown RBP6.89□□□□□ -1.31
SHM1YBR263W POL32P47110 350 aa6.89□□□□□ -1.31
SHM1YBR263W YMR265CQ03508 461 aaKnown RBP6.89□□□□□ -1.31
SHM1YBR263W TBS1P38114 1094 aa6.88□□□□□ -1.31
SHM1YBR263W UTP7P40055 554 aaKnown RBP6.88□□□□□ -1.31
SHM1YBR263W SPO1P53541 631 aa6.88□□□□□ -1.31
SHM1YBR263W NSG2P53898 299 aa6.88□□□□□ -1.31
SHM1YBR263W PUF6Q04373 656 aaKnown RBP6.88□□□□□ -1.31
SHM1YBR263W SYT1Q06836 1226 aa6.88□□□□□ -1.31
SHM1YBR263W THI72Q08579 599 aa6.88□□□□□ -1.31
SHM1YBR263W PMD1P32634 1753 aa6.88□□□□□ -1.31
SHM1YBR263W AI1P03875 834 aa6.87□□□□□ -1.31
SHM1YBR263W BIO2P32451 375 aa6.87□□□□□ -1.31
SHM1YBR263W ICL1P28240 557 aaPredicted RBP6.86□□□□□ -1.31
SHM1YBR263W GCD7P32502 381 aaPredicted RBP6.86□□□□□ -1.31
SHM1YBR263W SOH1P38633 127 aa6.86□□□□□ -1.31
SHM1YBR263W UTP13Q05946 817 aaKnown RBP6.86□□□□□ -1.31
SHM1YBR263W SUP35P05453 685 aaKnown RBP6.85□□□□□ -1.31
SHM1YBR263W NGR1P32831 672 aaKnown RBP6.85□□□□□ -1.31
SHM1YBR263W AHP1P38013 176 aaKnown RBP6.85□□□□□ -1.31
SHM1YBR263W KRE33P53914 1056 aaKnown RBP6.85□□□□□ -1.31
SHM1YBR263W SUP45P12385 437 aaKnown RBP6.85□□□□□ -1.31
SHM1YBR263W RET1P22276 1149 aaKnown RBP6.85□□□□□ -1.31
SHM1YBR263W KRE2P27809 442 aa6.85□□□□□ -1.31
SHM1YBR263W MGM1P32266 881 aa6.85□□□□□ -1.31
SHM1YBR263W YKU70P32807 602 aa6.85□□□□□ -1.31
SHM1YBR263W SLX8P40072 274 aa6.85□□□□□ -1.31
SHM1YBR263W SUM1P46676 1062 aa6.85□□□□□ -1.31
SHM1YBR263W HGH1P48362 394 aaKnown RBP6.85□□□□□ -1.31
SHM1YBR263W HDA3Q06623 655 aa6.85□□□□□ -1.31
SHM1YBR263W GRX6Q12438 231 aa6.85□□□□□ -1.31
SHM1YBR263W YDR461C-AQ2V2P7 80 aa6.85□□□□□ -1.31
SHM1YBR263W SPL2P38839 148 aa6.84□□□□□ -1.31
SHM1YBR263W ATG3P40344 310 aa6.84□□□□□ -1.31
SHM1YBR263W SQS1P53866 767 aaKnown RBP6.84□□□□□ -1.31
SHM1YBR263W ADE12P80210 433 aaKnown RBP6.84□□□□□ -1.31
SHM1YBR263W THI3Q07471 609 aa6.84□□□□□ -1.31
SHM1YBR263W SNU66Q12420 587 aaPredicted RBP6.84□□□□□ -1.31
SHM1YBR263W ADR1P07248 1323 aa6.83□□□□□ -1.32
SHM1YBR263W TOP1P04786 769 aa6.83□□□□□ -1.32
SHM1YBR263W SHC1P39000 512 aa6.83□□□□□ -1.32
SHM1YBR263W RPT4P53549 437 aaKnown RBP6.83□□□□□ -1.32
SHM1YBR263W ENO2P00925 437 aaKnown RBP6.82□□□□□ -1.32
SHM1YBR263W SSF1P38789 453 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms