RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W WRS1Q12109 432 aaKnown RBP6.86□□□□□ -1.31
CKS1YBR135W MSH3P25336 1018 aa6.85□□□□□ -1.31
CKS1YBR135W EXO5P38289 585 aa6.85□□□□□ -1.31
CKS1YBR135W YJL049WP47048 450 aa6.85□□□□□ -1.31
CKS1YBR135W GUP1P53154 560 aa6.85□□□□□ -1.31
CKS1YBR135W YGR053CP53234 283 aa6.85□□□□□ -1.31
CKS1YBR135W PEX13P80667 386 aa6.85□□□□□ -1.31
CKS1YBR135W HTS1P07263 546 aaKnown RBP6.84□□□□□ -1.31
CKS1YBR135W HEM13P11353 328 aaKnown RBP6.84□□□□□ -1.31
CKS1YBR135W RDH54P38086 958 aa6.84□□□□□ -1.31
CKS1YBR135W TMA46Q12000 345 aaKnown RBP6.84□□□□□ -1.31
CKS1YBR135W EEB1Q02891 456 aa6.83□□□□□ -1.32
CKS1YBR135W HAS1Q03532 505 aaKnown RBP6.83□□□□□ -1.32
CKS1YBR135W HDA2Q06629 674 aa6.83□□□□□ -1.32
CKS1YBR135W TY1A-LR4P0C2I8 440 aaKnown RBP6.82□□□□□ -1.32
CKS1YBR135W TY1A-DR6P0CX70 440 aa6.82□□□□□ -1.32
CKS1YBR135W TY1A-ER1P0CX71 440 aa6.82□□□□□ -1.32
CKS1YBR135W TY1A-LR2P0CX72 440 aa6.82□□□□□ -1.32
CKS1YBR135W TY1A-PLP0CX73 440 aa6.82□□□□□ -1.32
CKS1YBR135W TY1A-JR1P0CX74 440 aa6.82□□□□□ -1.32
CKS1YBR135W TY1A-LR3P0CX75 440 aa6.82□□□□□ -1.32
CKS1YBR135W TY1A-ML2P0CX76 440 aa6.82□□□□□ -1.32
CKS1YBR135W LEM3P42838 414 aa6.82□□□□□ -1.32
CKS1YBR135W IOC3P43596 787 aa6.82□□□□□ -1.32
CKS1YBR135W YIG1Q08956 461 aa6.82□□□□□ -1.32
CKS1YBR135W TY1A-GR1Q12085 440 aa6.82□□□□□ -1.32
CKS1YBR135W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.82□□□□□ -1.32
CKS1YBR135W TY1A-OLQ92392 440 aaKnown RBP6.82□□□□□ -1.32
CKS1YBR135W PDC5P16467 563 aaKnown RBP6.81□□□□□ -1.32
CKS1YBR135W RAD27P26793 382 aa6.81□□□□□ -1.32
CKS1YBR135W KNS1P32350 737 aaPredicted RBP6.81□□□□□ -1.32
CKS1YBR135W YKL077WP36081 392 aa6.81□□□□□ -1.32
CKS1YBR135W HXT13P39924 564 aa6.81□□□□□ -1.32
CKS1YBR135W NEO1P40527 1151 aa6.81□□□□□ -1.32
CKS1YBR135W ENT3P47160 408 aa6.81□□□□□ -1.32
CKS1YBR135W HXT17P53631 564 aa6.81□□□□□ -1.32
CKS1YBR135W SIW14P53965 281 aa6.81□□□□□ -1.32
CKS1YBR135W HXT15P54854 567 aa6.81□□□□□ -1.32
CKS1YBR135W OPI10Q08202 246 aa6.81□□□□□ -1.32
CKS1YBR135W GPM1P00950 247 aaKnown RBP6.8□□□□□ -1.32
CKS1YBR135W VMA4P22203 233 aaKnown RBP6.8□□□□□ -1.32
CKS1YBR135W TAT2P38967 592 aa6.8□□□□□ -1.32
CKS1YBR135W SOK2P53438 785 aaPredicted RBP6.8□□□□□ -1.32
CKS1YBR135W REC8Q12188 680 aa6.8□□□□□ -1.32
CKS1YBR135W PRI2P20457 528 aa6.79□□□□□ -1.32
CKS1YBR135W NEM1P38757 446 aa6.79□□□□□ -1.32
CKS1YBR135W UTP22P53254 1237 aaPredicted RBP6.79□□□□□ -1.32
CKS1YBR135W GIS4Q04233 774 aa6.79□□□□□ -1.32
CKS1YBR135W NSE3Q05541 303 aa6.79□□□□□ -1.32
CKS1YBR135W NAR1P23503 491 aaKnown RBP6.78□□□□□ -1.32
CKS1YBR135W YKL069WP36088 180 aa6.78□□□□□ -1.32
CKS1YBR135W SPF1P39986 1215 aaKnown RBP6.78□□□□□ -1.32
CKS1YBR135W JJJ3P47138 172 aa6.78□□□□□ -1.32
CKS1YBR135W FAL1Q12099 399 aaKnown RBP6.78□□□□□ -1.32
CKS1YBR135W SLP1Q12232 587 aa6.78□□□□□ -1.32
CKS1YBR135W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
CKS1YBR135W GRX1P25373 110 aaKnown RBP6.77□□□□□ -1.33
CKS1YBR135W SRP40P32583 406 aaPredicted RBP6.77□□□□□ -1.33
CKS1YBR135W ARL1P38116 183 aaKnown RBP6.77□□□□□ -1.33
CKS1YBR135W PAN5P38787 379 aa6.77□□□□□ -1.33
CKS1YBR135W GIP2P40036 548 aa6.77□□□□□ -1.33
CKS1YBR135W ROD1Q02805 837 aa6.77□□□□□ -1.33
CKS1YBR135W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
CKS1YBR135W SPO71Q03868 1245 aa6.77□□□□□ -1.33
CKS1YBR135W TDA5Q06417 326 aaKnown RBP6.77□□□□□ -1.33
CKS1YBR135W TRP2P00899 507 aaKnown RBP6.76□□□□□ -1.33
CKS1YBR135W STI1P15705 589 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
CKS1YBR135W LYP1P32487 611 aa6.76□□□□□ -1.33
CKS1YBR135W RER2P35196 286 aa6.76□□□□□ -1.33
CKS1YBR135W SLS1P42900 643 aa6.76□□□□□ -1.33
CKS1YBR135W MTR4P47047 1073 aaKnown RBP6.76□□□□□ -1.33
CKS1YBR135W GCV1P48015 400 aa6.76□□□□□ -1.33
CKS1YBR135W UTP5Q04177 643 aaKnown RBP6.76□□□□□ -1.33
CKS1YBR135W BAS1P22035 811 aa6.75□□□□□ -1.33
CKS1YBR135W YKL091CP33324 310 aaKnown RBP6.75□□□□□ -1.33
CKS1YBR135W NAN1Q02931 896 aaKnown RBP6.75□□□□□ -1.33
CKS1YBR135W EST2Q06163 884 aa6.75□□□□□ -1.33
CKS1YBR135W BDF2Q07442 638 aa6.75□□□□□ -1.33
CKS1YBR135W ALG14P38242 237 aa6.74□□□□□ -1.33
CKS1YBR135W POL5P39985 1022 aaKnown RBP6.74□□□□□ -1.33
CKS1YBR135W TED1P40533 473 aa6.74□□□□□ -1.33
CKS1YBR135W TYW3P53177 273 aa6.74□□□□□ -1.33
CKS1YBR135W MEC3Q02574 474 aa6.74□□□□□ -1.33
CKS1YBR135W RPN4Q03465 531 aa6.74□□□□□ -1.33
CKS1YBR135W AGP1P25376 633 aa6.73□□□□□ -1.33
CKS1YBR135W MKK2P32491 506 aa6.73□□□□□ -1.33
CKS1YBR135W ADD66P36040 267 aa6.73□□□□□ -1.33
CKS1YBR135W PGM2P37012 569 aaKnown RBP6.73□□□□□ -1.33
CKS1YBR135W RKM2Q03942 479 aa6.73□□□□□ -1.33
CKS1YBR135W SPO20Q04359 397 aa6.73□□□□□ -1.33
CKS1YBR135W CDC53Q12018 815 aaKnown RBP6.73□□□□□ -1.33
CKS1YBR135W INO80P53115 1489 aa6.73□□□□□ -1.33
CKS1YBR135W MON2P48563 1636 aaPredicted RBP6.72□□□□□ -1.33
CKS1YBR135W RAD4P14736 754 aa6.72□□□□□ -1.33
CKS1YBR135W NMD2P38798 1089 aaKnown RBP6.72□□□□□ -1.33
CKS1YBR135W KRI1P42846 591 aaKnown RBP6.72□□□□□ -1.33
CKS1YBR135W HPF1Q05164 967 aa6.72□□□□□ -1.33
CKS1YBR135W ELG1Q12050 791 aa6.72□□□□□ -1.33
CKS1YBR135W DPH6Q12429 685 aa6.72□□□□□ -1.33
CKS1YBR135W DED1P06634 604 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms