RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	POL12	P38121	705 aa	Predicted RBP	4.83	□□□□□ -1.64
CMD1	YBR109C	CIC1	P38779	376 aa	Known RBP	4.83	□□□□□ -1.64
CMD1	YBR109C	TED1	P40533	473 aa		4.83	□□□□□ -1.64
CMD1	YBR109C	EMG1	Q06287	252 aa	Known RBP	4.83	□□□□□ -1.64
CMD1	YBR109C	NOC3	Q07896	663 aa	Predicted RBP	4.83	□□□□□ -1.64
CMD1	YBR109C	IDI1	P15496	288 aa		4.82	□□□□□ -1.64
CMD1	YBR109C	AIM46	P38885	310 aa		4.82	□□□□□ -1.64
CMD1	YBR109C	MET10	P39692	1035 aa		4.82	□□□□□ -1.64
CMD1	YBR109C	YIL165C	P40446	119 aa		4.82	□□□□□ -1.64
CMD1	YBR109C	SDH1	Q00711	640 aa		4.82	□□□□□ -1.64
CMD1	YBR109C	TOS4	Q06266	489 aa		4.82	□□□□□ -1.64
CMD1	YBR109C	GIP2	P40036	548 aa		4.81	□□□□□ -1.64
CMD1	YBR109C	CTR9	P89105	1077 aa		4.81	□□□□□ -1.64
CMD1	YBR109C	INP54	Q08227	384 aa	Known RBP	4.81	□□□□□ -1.64
CMD1	YBR109C	DFG16	Q99234	619 aa		4.81	□□□□□ -1.64
CMD1	YBR109C	COB	P00163	385 aa		4.8	□□□□□ -1.64
CMD1	YBR109C	FLP1	P03870	423 aa		4.8	□□□□□ -1.64
CMD1	YBR109C	YHL008C	P38750	627 aa		4.8	□□□□□ -1.64
CMD1	YBR109C	SPR28	Q04921	423 aa		4.8	□□□□□ -1.64
CMD1	YBR109C	SVF1	Q05515	481 aa		4.8	□□□□□ -1.64
CMD1	YBR109C	GAS1	P22146	559 aa	Known RBP	4.79	□□□□□ -1.64
CMD1	YBR109C	PYC2	P32327	1180 aa	Known RBP	4.79	□□□□□ -1.64
CMD1	YBR109C	OXR1	Q08952	273 aa		4.79	□□□□□ -1.64
CMD1	YBR109C	TY1B-DR4	Q07793	1604 aa		4.79	□□□□□ -1.64
CMD1	YBR109C	FAA3	P39002	694 aa		4.78	□□□□□ -1.64
CMD1	YBR109C	RPS26A	P39938	119 aa	Known RBP	4.78	□□□□□ -1.64
CMD1	YBR109C	RPS26B	P39939	119 aa	Known RBP	4.78	□□□□□ -1.64
CMD1	YBR109C	YER156C	P40093	338 aa	Known RBP	4.78	□□□□□ -1.64
CMD1	YBR109C	YGR122W	P53272	402 aa		4.78	□□□□□ -1.64
CMD1	YBR109C	YCS4	Q06156	1176 aa		4.78	□□□□□ -1.64
CMD1	YBR109C	HXK1	P04806	485 aa	Known RBP	4.77	□□□□□ -1.65
CMD1	YBR109C	CYC8	P14922	966 aa		4.77	□□□□□ -1.65
CMD1	YBR109C	DUR3	P33413	735 aa		4.77	□□□□□ -1.65
CMD1	YBR109C	MSH6	Q03834	1242 aa		4.77	□□□□□ -1.65
CMD1	YBR109C	DAL4	Q04895	635 aa		4.77	□□□□□ -1.65
CMD1	YBR109C	HDA2	Q06629	674 aa		4.77	□□□□□ -1.65
CMD1	YBR109C	SKI3	P17883	1432 aa	Known RBP	4.76	□□□□□ -1.65
CMD1	YBR109C	PRP40	P33203	583 aa	Known RBP	4.76	□□□□□ -1.65
CMD1	YBR109C	PPT1	P53043	513 aa		4.76	□□□□□ -1.65
CMD1	YBR109C	RMD1	Q03441	430 aa		4.76	□□□□□ -1.65
CMD1	YBR109C	SPT6	P23615	1451 aa	Known RBP	4.75	□□□□□ -1.65
CMD1	YBR109C	RAD2	P07276	1031 aa		4.75	□□□□□ -1.65
CMD1	YBR109C	ECM2	P38241	364 aa	Known RBP	4.75	□□□□□ -1.65
CMD1	YBR109C	NUT1	P53114	1132 aa		4.75	□□□□□ -1.65
CMD1	YBR109C	MON1	P53129	644 aa		4.75	□□□□□ -1.65
CMD1	YBR109C	SOK2	P53438	785 aa	Predicted RBP	4.75	□□□□□ -1.65
CMD1	YBR109C	JIP5	Q06214	492 aa	Predicted RBP	4.75	□□□□□ -1.65
CMD1	YBR109C	ESF1	Q06344	628 aa	Known RBP	4.75	□□□□□ -1.65
CMD1	YBR109C	CDA2	Q06703	312 aa		4.75	□□□□□ -1.65
CMD1	YBR109C	TAD3	Q9URQ3	322 aa		4.75	□□□□□ -1.65
CMD1	YBR109C	HSL1	P34244	1518 aa		4.75	□□□□□ -1.65
CMD1	YBR109C	MCM5	P29496	775 aa	Known RBP	4.74	□□□□□ -1.65
CMD1	YBR109C	PEP7	P32609	515 aa		4.74	□□□□□ -1.65
CMD1	YBR109C	UGA4	P32837	571 aa		4.74	□□□□□ -1.65
CMD1	YBR109C	ALD3	P54114	506 aa		4.74	□□□□□ -1.65
CMD1	YBR109C	RSC2	Q06488	889 aa		4.74	□□□□□ -1.65
CMD1	YBR109C	FUS1	P11710	512 aa		4.73	□□□□□ -1.65
CMD1	YBR109C	KAR2	P16474	682 aa	Known RBP	4.73	□□□□□ -1.65
CMD1	YBR109C	TSA1	P34760	196 aa	Known RBP	4.73	□□□□□ -1.65
CMD1	YBR109C	RIM11	P38615	370 aa		4.73	□□□□□ -1.65
CMD1	YBR109C	SAP155	P43612	1002 aa		4.73	□□□□□ -1.65
CMD1	YBR109C	YPL109C	Q02981	657 aa		4.73	□□□□□ -1.65
CMD1	YBR109C	GCD1	P09032	578 aa	Predicted RBP	4.72	□□□□□ -1.65
CMD1	YBR109C	NAP1	P25293	417 aa	Known RBP	4.72	□□□□□ -1.65
CMD1	YBR109C	THI80	P35202	319 aa		4.72	□□□□□ -1.65
CMD1	YBR109C	MRPS18	P42847	217 aa		4.72	□□□□□ -1.65
CMD1	YBR109C	YJL181W	P46987	611 aa		4.72	□□□□□ -1.65
CMD1	YBR109C	ULP1	Q02724	621 aa		4.72	□□□□□ -1.65
CMD1	YBR109C	PMT7	Q06644	662 aa		4.72	□□□□□ -1.65
CMD1	YBR109C	GLO4	Q12320	285 aa		4.72	□□□□□ -1.65
CMD1	YBR109C	CMR1	Q12510	522 aa	Known RBP	4.72	□□□□□ -1.65
CMD1	YBR109C	PRE9	P23638	258 aa	Known RBP	4.71	□□□□□ -1.66
CMD1	YBR109C	TFA2	P36145	328 aa		4.71	□□□□□ -1.66
CMD1	YBR109C	RVS167	P39743	482 aa	Known RBP	4.71	□□□□□ -1.66
CMD1	YBR109C	INP51	P40559	946 aa	Known RBP	4.71	□□□□□ -1.66
CMD1	YBR109C	BIO5	P53744	561 aa	Known RBP	4.71	□□□□□ -1.66
CMD1	YBR109C	VPS16	Q03308	798 aa		4.71	□□□□□ -1.66
CMD1	YBR109C	ADI1	Q03677	179 aa		4.71	□□□□□ -1.66
CMD1	YBR109C	MCD1	Q12158	566 aa		4.71	□□□□□ -1.66
CMD1	YBR109C	PRP5	P21372	849 aa	Predicted RBP	4.7	□□□□□ -1.66
CMD1	YBR109C	NPR1	P22211	790 aa		4.7	□□□□□ -1.66
CMD1	YBR109C	PET112	P33893	541 aa		4.7	□□□□□ -1.66
CMD1	YBR109C	PIC2	P40035	300 aa		4.7	□□□□□ -1.66
CMD1	YBR109C	YNR065C	P53751	1116 aa		4.7	□□□□□ -1.66
CMD1	YBR109C	YAF9	P53930	226 aa		4.7	□□□□□ -1.66
CMD1	YBR109C	ORC1	P54784	914 aa	Predicted RBP	4.7	□□□□□ -1.66
CMD1	YBR109C	PIN2	Q12057	282 aa		4.7	□□□□□ -1.66
CMD1	YBR109C	HVG1	P0CE11	249 aa		4.69	□□□□□ -1.66
CMD1	YBR109C	MNR2	P35724	969 aa		4.69	□□□□□ -1.66
CMD1	YBR109C	YPT53	P36019	220 aa		4.69	□□□□□ -1.66
CMD1	YBR109C	FLR1	P38124	548 aa		4.69	□□□□□ -1.66
CMD1	YBR109C	MAD1	P40957	749 aa		4.69	□□□□□ -1.66
CMD1	YBR109C	NCE103	P53615	221 aa		4.69	□□□□□ -1.66
CMD1	YBR109C	SOG2	Q08817	791 aa		4.69	□□□□□ -1.66
CMD1	YBR109C	XRN1	P22147	1528 aa	Known RBP	4.68	□□□□□ -1.66
CMD1	YBR109C	CLN2	P20438	545 aa		4.68	□□□□□ -1.66
CMD1	YBR109C	YJR124C	P47159	448 aa		4.68	□□□□□ -1.66
CMD1	YBR109C	ALD6	P54115	500 aa	Known RBP	4.68	□□□□□ -1.66
CMD1	YBR109C	THO2	P53552	1597 aa	Known RBP	4.68	□□□□□ -1.66
CMD1	YBR109C	RSM26	P47141	266 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms