RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W MPH3P0CE00 602 aa7.93□□□□□ -1.14
TOD6YBL054W PRI1P10363 409 aa7.93□□□□□ -1.14
TOD6YBL054W SEC14P24280 304 aaKnown RBP7.93□□□□□ -1.14
TOD6YBL054W YET1P35723 206 aa7.93□□□□□ -1.14
TOD6YBL054W RPN10P38886 268 aaKnown RBP7.93□□□□□ -1.14
TOD6YBL054W EFM4P40516 257 aa7.93□□□□□ -1.14
TOD6YBL054W FYV8P46949 817 aaKnown RBP7.93□□□□□ -1.14
TOD6YBL054W TAN1P53072 289 aaPredicted RBP7.93□□□□□ -1.14
TOD6YBL054W FAR11P53917 953 aa7.93□□□□□ -1.14
TOD6YBL054W AAD16Q02895 342 aa7.93□□□□□ -1.14
TOD6YBL054W VPS30Q02948 557 aa7.93□□□□□ -1.14
TOD6YBL054W EIS1Q05050 843 aaKnown RBP7.93□□□□□ -1.14
TOD6YBL054W DCS2Q12123 353 aa7.93□□□□□ -1.14
TOD6YBL054W FAS2P19097 1887 aaKnown RBP7.93□□□□□ -1.14
TOD6YBL054W SAC3P46674 1301 aa7.93□□□□□ -1.14
TOD6YBL054W CDC8P00572 216 aa7.93□□□□□ -1.14
TOD6YBL054W TOP1P04786 769 aa7.93□□□□□ -1.14
TOD6YBL054W RPS6AP0CX37 236 aaKnown RBP7.93□□□□□ -1.14
TOD6YBL054W RPS6BP0CX38 236 aaPredicted RBP7.93□□□□□ -1.14
TOD6YBL054W PMR1P13586 950 aa7.93□□□□□ -1.14
TOD6YBL054W ZUO1P32527 433 aaKnown RBP7.93□□□□□ -1.14
TOD6YBL054W YMR147WP40218 223 aaKnown RBP7.93□□□□□ -1.14
TOD6YBL054W SHQ1P40486 507 aaPredicted RBP7.93□□□□□ -1.14
TOD6YBL054W XKS1P42826 600 aa7.93□□□□□ -1.14
TOD6YBL054W YMR1P47147 688 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
TOD6YBL054W ALD3P54114 506 aa7.93□□□□□ -1.14
TOD6YBL054W RRP6Q12149 733 aaKnown RBP7.93□□□□□ -1.14
TOD6YBL054W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
TOD6YBL054W SMC6Q12749 1114 aa7.93□□□□□ -1.14
TOD6YBL054W JIP3O13555 125 aa7.92□□□□□ -1.14
TOD6YBL054W CDC37P06101 506 aaKnown RBP7.92□□□□□ -1.14
TOD6YBL054W SRB4P32569 687 aa7.92□□□□□ -1.14
TOD6YBL054W SSF2Q12153 453 aaPredicted RBP7.92□□□□□ -1.14
TOD6YBL054W RSF2P46974 1380 aa7.91□□□□□ -1.14
TOD6YBL054W PRP5P21372 849 aaPredicted RBP7.91□□□□□ -1.14
TOD6YBL054W SPO11P23179 398 aa7.91□□□□□ -1.14
TOD6YBL054W RAD57P25301 460 aa7.91□□□□□ -1.14
TOD6YBL054W PAP1P29468 568 aaKnown RBP7.91□□□□□ -1.14
TOD6YBL054W ISW1P38144 1129 aa7.91□□□□□ -1.14
TOD6YBL054W CTM1P38818 585 aa7.91□□□□□ -1.14
TOD6YBL054W MRX1P40050 688 aa7.91□□□□□ -1.14
TOD6YBL054W MSB3P48566 633 aaPredicted RBP7.91□□□□□ -1.14
TOD6YBL054W NNF2P53253 936 aa7.91□□□□□ -1.14
TOD6YBL054W PKH1Q03407 766 aa7.91□□□□□ -1.14
TOD6YBL054W UTP5Q04177 643 aaKnown RBP7.91□□□□□ -1.14
TOD6YBL054W YLR287CQ05881 355 aa7.91□□□□□ -1.14
TOD6YBL054W GET3Q12154 354 aaKnown RBP7.91□□□□□ -1.14
TOD6YBL054W SEC18P18759 758 aaKnown RBP7.9□□□□□ -1.14
TOD6YBL054W GAL11P19659 1081 aa7.9□□□□□ -1.14
TOD6YBL054W RAD51P25454 400 aa7.9□□□□□ -1.14
TOD6YBL054W BMH1P29311 267 aaKnown RBP7.9□□□□□ -1.14
TOD6YBL054W APL2P36000 726 aaPredicted RBP7.9□□□□□ -1.14
TOD6YBL054W YNL193WP53870 558 aa7.9□□□□□ -1.14
TOD6YBL054W NGL3Q03210 505 aa7.9□□□□□ -1.14
TOD6YBL054W PKH3Q03306 898 aaPredicted RBP7.9□□□□□ -1.14
TOD6YBL054W MTC5Q03897 1148 aa7.9□□□□□ -1.14
TOD6YBL054W YLR271WQ06152 274 aa7.9□□□□□ -1.14
TOD6YBL054W EST2Q06163 884 aa7.9□□□□□ -1.14
TOD6YBL054W KRS1P15180 591 aaKnown RBP7.89□□□□□ -1.15
TOD6YBL054W SPO12P17123 173 aa7.89□□□□□ -1.15
TOD6YBL054W PDB1P32473 366 aaKnown RBP7.89□□□□□ -1.15
TOD6YBL054W YKR018CP36114 725 aa7.89□□□□□ -1.15
TOD6YBL054W MET1P36150 593 aa7.89□□□□□ -1.15
TOD6YBL054W AKR1P39010 764 aa7.89□□□□□ -1.15
TOD6YBL054W PXA1P41909 870 aa7.89□□□□□ -1.15
TOD6YBL054W ILM1P47155 203 aa7.89□□□□□ -1.15
TOD6YBL054W YJR142WP47173 342 aa7.89□□□□□ -1.15
TOD6YBL054W RMT2Q03305 412 aa7.89□□□□□ -1.15
TOD6YBL054W SUP35P05453 685 aaKnown RBP7.88□□□□□ -1.15
TOD6YBL054W CDC6P09119 513 aa7.88□□□□□ -1.15
TOD6YBL054W CKI1P20485 582 aa7.88□□□□□ -1.15
TOD6YBL054W YME2P32843 850 aa7.88□□□□□ -1.15
TOD6YBL054W CRG1P38892 291 aaRIP-Chip data7.88□□□□□ -1.15not detected
TOD6YBL054W YCK3P39962 524 aa7.88□□□□□ -1.15
TOD6YBL054W SEC26P41810 973 aaKnown RBP7.88□□□□□ -1.15
TOD6YBL054W UBP16Q02863 499 aa7.88□□□□□ -1.15
TOD6YBL054W SPO19Q03029 223 aa7.88□□□□□ -1.15
TOD6YBL054W FCP1Q03254 732 aa7.88□□□□□ -1.15
TOD6YBL054W EBS1Q03466 884 aaKnown RBP7.88□□□□□ -1.15
TOD6YBL054W LCB5Q06147 687 aaKnown RBP7.88□□□□□ -1.15
TOD6YBL054W CSC1Q06538 782 aa7.88□□□□□ -1.15
TOD6YBL054W CMS1Q07897 291 aaKnown RBP7.88□□□□□ -1.15
TOD6YBL054W TY4A-HQ6Q5P6 413 aa7.88□□□□□ -1.15
TOD6YBL054W ARG1P22768 420 aa7.88□□□□□ -1.15
TOD6YBL054W SEC8P32855 1065 aa7.88□□□□□ -1.15
TOD6YBL054W MIP6P38760 659 aaKnown RBP7.88□□□□□ -1.15
TOD6YBL054W ALD2P47771 506 aa7.88□□□□□ -1.15
TOD6YBL054W YGR237CP50089 785 aa7.88□□□□□ -1.15
TOD6YBL054W LSC2P53312 427 aa7.88□□□□□ -1.15
TOD6YBL054W SPN1Q06505 410 aaPredicted RBP7.88□□□□□ -1.15
TOD6YBL054W YLR001CQ07895 862 aa7.88□□□□□ -1.15
TOD6YBL054W NEW1Q08972 1196 aaKnown RBP7.88□□□□□ -1.15
TOD6YBL054W TOM70P07213 617 aaKnown RBP7.87□□□□□ -1.15
TOD6YBL054W VPS1P21576 704 aaKnown RBP7.87□□□□□ -1.15
TOD6YBL054W MRPS28P21771 286 aa7.87□□□□□ -1.15
TOD6YBL054W SWI4P25302 1093 aaKnown RBP7.87□□□□□ -1.15
TOD6YBL054W BMH2P34730 273 aaKnown RBP7.87□□□□□ -1.15
TOD6YBL054W RER2P35196 286 aa7.87□□□□□ -1.15
TOD6YBL054W YMR124WP39523 943 aaKnown RBP7.87□□□□□ -1.15
TOD6YBL054W TIF4632P39936 914 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms