RNA–Protein interactions for RNA: YAR061W

YAR061W, Transcript of Pseudogenic fragment with similarity to flocculins, yeast

Gene YAR061W, Length 204 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAR061W	YAR061W	MSN1	P22148	382 aa		5.8	□□□□□ -1.48
YAR061W	YAR061W	ECL1	P48235	211 aa		5.8	□□□□□ -1.48
YAR061W	YAR061W	ALD3	P54114	506 aa		5.8	□□□□□ -1.48
YAR061W	YAR061W	YKL222C	P35995	705 aa		5.79	□□□□□ -1.48
YAR061W	YAR061W	EMG1	Q06287	252 aa	Known RBP	5.79	□□□□□ -1.48
YAR061W	YAR061W	VPS24	P36095	224 aa	Known RBP	5.78	□□□□□ -1.48
YAR061W	YAR061W	ELG1	Q12050	791 aa		5.78	□□□□□ -1.48
YAR061W	YAR061W	DFG16	Q99234	619 aa		5.78	□□□□□ -1.48
YAR061W	YAR061W	DNA2	P38859	1522 aa		5.78	□□□□□ -1.48
YAR061W	YAR061W	ESP1	Q03018	1630 aa		5.77	□□□□□ -1.48
YAR061W	YAR061W	TSC11	P40061	1430 aa		5.77	□□□□□ -1.49
YAR061W	YAR061W	RPP0	P05317	312 aa	Known RBP	5.77	□□□□□ -1.49
YAR061W	YAR061W	TGL4	P36165	910 aa		5.77	□□□□□ -1.49
YAR061W	YAR061W	CHZ1	P40019	153 aa	Predicted RBP	5.77	□□□□□ -1.49
YAR061W	YAR061W	SPO71	Q03868	1245 aa		5.77	□□□□□ -1.49
YAR061W	YAR061W	GIC2	Q06648	383 aa		5.77	□□□□□ -1.49
YAR061W	YAR061W	NUP159	P40477	1460 aa		5.77	□□□□□ -1.49
YAR061W	YAR061W	FUS1	P11710	512 aa		5.76	□□□□□ -1.49
YAR061W	YAR061W	ERS1	P17261	260 aa		5.76	□□□□□ -1.49
YAR061W	YAR061W	ISC10	P32645	267 aa		5.76	□□□□□ -1.49
YAR061W	YAR061W	ECM23	Q02710	187 aa		5.76	□□□□□ -1.49
YAR061W	YAR061W	CDC45	Q08032	650 aa		5.76	□□□□□ -1.49
YAR061W	YAR061W	PCT1	P13259	424 aa		5.75	□□□□□ -1.49
YAR061W	YAR061W	MSP1	P28737	362 aa		5.75	□□□□□ -1.49
YAR061W	YAR061W	MSH4	P40965	878 aa	Predicted RBP	5.75	□□□□□ -1.49
YAR061W	YAR061W	HGH1	P48362	394 aa	Known RBP	5.75	□□□□□ -1.49
YAR061W	YAR061W	KIP3	P53086	805 aa	Known RBP	5.75	□□□□□ -1.49
YAR061W	YAR061W	SNQ2	P32568	1501 aa	Known RBP	5.74	□□□□□ -1.49
YAR061W	YAR061W	RAD26	P40352	1085 aa		5.74	□□□□□ -1.49
YAR061W	YAR061W	ALD4	P46367	519 aa	Known RBP	5.74	□□□□□ -1.49
YAR061W	YAR061W	PIL1	P53252	339 aa	Known RBP	5.74	□□□□□ -1.49
YAR061W	YAR061W	ESC8	Q08119	714 aa		5.74	□□□□□ -1.49
YAR061W	YAR061W	GEA1	P47102	1408 aa	Predicted RBP	5.74	□□□□□ -1.49
YAR061W	YAR061W	GCN2	P15442	1659 aa		5.73	□□□□□ -1.49
YAR061W	YAR061W	YOR1	P53049	1477 aa		5.73	□□□□□ -1.49
YAR061W	YAR061W	GAS1	P22146	559 aa	Known RBP	5.73	□□□□□ -1.49
YAR061W	YAR061W	BOI1	P38041	980 aa	Known RBP	5.73	□□□□□ -1.49
YAR061W	YAR061W	ARL1	P38116	183 aa	Known RBP	5.73	□□□□□ -1.49
YAR061W	YAR061W	VPS27	P40343	622 aa	Known RBP	5.73	□□□□□ -1.49
YAR061W	YAR061W	PRP43	P53131	767 aa	Known RBP	5.73	□□□□□ -1.49
YAR061W	YAR061W	LSP1	Q12230	341 aa	Known RBP	5.73	□□□□□ -1.49
YAR061W	YAR061W	UBX7	P38349	436 aa		5.72	□□□□□ -1.49
YAR061W	YAR061W	TCD1	P38756	429 aa		5.72	□□□□□ -1.49
YAR061W	YAR061W	DJP1	P40564	432 aa		5.72	□□□□□ -1.49
YAR061W	YAR061W	YCF1	P39109	1515 aa	Known RBP	5.72	□□□□□ -1.49
YAR061W	YAR061W	YHL008C	P38750	627 aa		5.71	□□□□□ -1.5
YAR061W	YAR061W	AIM46	P38885	310 aa		5.71	□□□□□ -1.5
YAR061W	YAR061W	TPM2	P40414	161 aa		5.71	□□□□□ -1.5
YAR061W	YAR061W	NEO1	P40527	1151 aa		5.71	□□□□□ -1.5
YAR061W	YAR061W	TAF1	P46677	1066 aa		5.71	□□□□□ -1.5
YAR061W	YAR061W	VPS4	P52917	437 aa		5.71	□□□□□ -1.5
YAR061W	YAR061W	YNL011C	P53980	444 aa		5.71	□□□□□ -1.5
YAR061W	YAR061W	YBR287W	P38355	427 aa		5.7	□□□□□ -1.5
YAR061W	YAR061W	YNR065C	P53751	1116 aa		5.7	□□□□□ -1.5
YAR061W	YAR061W	PRP3	Q03338	469 aa	Predicted RBP	5.7	□□□□□ -1.5
YAR061W	YAR061W	CDA2	Q06703	312 aa		5.7	□□□□□ -1.5
YAR061W	YAR061W	TRM3	Q07527	1436 aa		5.7	□□□□□ -1.5
YAR061W	YAR061W	KOG1	P38873	1557 aa		5.7	□□□□□ -1.5
YAR061W	YAR061W	TSA1	P34760	196 aa	Known RBP	5.69	□□□□□ -1.5
YAR061W	YAR061W	BYE1	P36106	594 aa		5.69	□□□□□ -1.5
YAR061W	YAR061W	FIR1	P40020	876 aa		5.69	□□□□□ -1.5
YAR061W	YAR061W	DSN1	P40568	576 aa		5.69	□□□□□ -1.5
YAR061W	YAR061W	MMM1	P41800	426 aa		5.69	□□□□□ -1.5
YAR061W	YAR061W	YJR124C	P47159	448 aa		5.69	□□□□□ -1.5
YAR061W	YAR061W	TAN1	P53072	289 aa	Predicted RBP	5.69	□□□□□ -1.5
YAR061W	YAR061W	HAS1	Q03532	505 aa	Known RBP	5.69	□□□□□ -1.5
YAR061W	YAR061W	ESC2	Q06340	456 aa		5.69	□□□□□ -1.5
YAR061W	YAR061W	RKR1	Q04781	1562 aa		5.68	□□□□□ -1.5
YAR061W	YAR061W	HVG1	P0CE11	249 aa		5.68	□□□□□ -1.5
YAR061W	YAR061W	WHI3	P34761	661 aa	Known RBP	5.68	□□□□□ -1.5
YAR061W	YAR061W	TTI1	P36097	1038 aa		5.68	□□□□□ -1.5
YAR061W	YAR061W	HXT8	P40886	569 aa		5.68	□□□□□ -1.5
YAR061W	YAR061W	RGD2	P43556	714 aa		5.68	□□□□□ -1.5
YAR061W	YAR061W	ESC1	Q03661	1658 aa	Known RBP	5.67	□□□□□ -1.5
YAR061W	YAR061W	SRP54	P20424	541 aa	Known RBP	5.67	□□□□□ -1.5
YAR061W	YAR061W	LTV1	P34078	463 aa		5.67	□□□□□ -1.5
YAR061W	YAR061W	CIN4	P39110	191 aa		5.67	□□□□□ -1.5
YAR061W	YAR061W	GIP4	P39732	760 aa		5.67	□□□□□ -1.5
YAR061W	YAR061W	CIT3	P43635	486 aa		5.67	□□□□□ -1.5
YAR061W	YAR061W	NNF2	P53253	936 aa		5.67	□□□□□ -1.5
YAR061W	YAR061W	VPS60	Q03390	229 aa		5.67	□□□□□ -1.5
YAR061W	YAR061W	RVB2	Q12464	471 aa	Known RBP	5.67	□□□□□ -1.5
YAR061W	YAR061W	PDR5	P33302	1511 aa	Known RBP	5.67	□□□□□ -1.5
YAR061W	YAR061W	PDR15	Q04182	1529 aa	Known RBP	5.66	□□□□□ -1.5
YAR061W	YAR061W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
YAR061W	YAR061W	HSP78	P33416	811 aa		5.66	□□□□□ -1.5
YAR061W	YAR061W	NOP7	P53261	605 aa	Known RBP	5.66	□□□□□ -1.5
YAR061W	YAR061W	FAR11	P53917	953 aa		5.66	□□□□□ -1.5
YAR061W	YAR061W	RNT1	Q02555	471 aa		5.66	□□□□□ -1.5
YAR061W	YAR061W	PDS5	Q04264	1277 aa		5.66	□□□□□ -1.5
YAR061W	YAR061W	NOP14	Q99207	810 aa	Known RBP	5.66	□□□□□ -1.5
YAR061W	YAR061W	KTR2	P33550	425 aa		5.65	□□□□□ -1.5
YAR061W	YAR061W	SIC1	P38634	284 aa		5.65	□□□□□ -1.5
YAR061W	YAR061W	YOR223W	Q12015	292 aa		5.65	□□□□□ -1.5
YAR061W	YAR061W	NSI1	Q12457	570 aa		5.65	□□□□□ -1.5
YAR061W	YAR061W	RAD9	P14737	1309 aa		5.65	□□□□□ -1.51
YAR061W	YAR061W	NUP157	P40064	1391 aa	Known RBP	5.65	□□□□□ -1.51
YAR061W	YAR061W	CLB1	P24868	471 aa		5.64	□□□□□ -1.51
YAR061W	YAR061W	MSH3	P25336	1018 aa		5.64	□□□□□ -1.51
YAR061W	YAR061W	DEP1	P31385	405 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms