RNA–Protein interactions for RNA: YAL062W

GDH3, Transcript of NADP(+)-dependent glutamate dehydrogenase, yeast

Gene GDH3, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDH3	YAL062W	CLF1	Q12309	687 aa	Predicted RBP	11.95	□□□□□ -0.5
GDH3	YAL062W	SWI4	P25302	1093 aa	Known RBP	11.94	□□□□□ -0.5
GDH3	YAL062W	MAL33	P38157	468 aa		11.94	□□□□□ -0.5
GDH3	YAL062W	RFC5	P38251	354 aa		11.94	□□□□□ -0.5
GDH3	YAL062W	KEL1	P38853	1164 aa	Known RBP	11.94	□□□□□ -0.5
GDH3	YAL062W	CSM2	P40465	213 aa		11.94	□□□□□ -0.5
GDH3	YAL062W	SNU71	P53207	620 aa	Known RBP	11.94	□□□□□ -0.5
GDH3	YAL062W	DIT2	P21595	489 aa		11.93	□□□□□ -0.5
GDH3	YAL062W	RNR3	P21672	869 aa	Known RBP	11.93	□□□□□ -0.5
GDH3	YAL062W	RPL8B	P29453	256 aa	Known RBP	11.93	□□□□□ -0.5
GDH3	YAL062W	RPN10	P38886	268 aa	Known RBP	11.93	□□□□□ -0.5
GDH3	YAL062W	CIR1	P42940	261 aa		11.93	□□□□□ -0.5
GDH3	YAL062W	YOR111W	Q99210	232 aa		11.93	□□□□□ -0.5
GDH3	YAL062W	HCA4	P20448	770 aa	Known RBP	11.92	□□□□□ -0.5
GDH3	YAL062W	CHS3	P29465	1165 aa		11.92	□□□□□ -0.5
GDH3	YAL062W	ELM1	P32801	640 aa		11.92	□□□□□ -0.5
GDH3	YAL062W	CST26	P38226	397 aa		11.92	□□□□□ -0.5
GDH3	YAL062W	FOL1	P53848	824 aa		11.92	□□□□□ -0.5
GDH3	YAL062W	PEX19	Q07418	342 aa		11.92	□□□□□ -0.5
GDH3	YAL062W	MBR1	P23493	339 aa		11.92	□□□□□ -0.5
GDH3	YAL062W	RDS1	P25611	832 aa		11.92	□□□□□ -0.5
GDH3	YAL062W	HSP82	P02829	709 aa	Known RBP	11.91	□□□□□ -0.5
GDH3	YAL062W	NUC1	P08466	329 aa		11.91	□□□□□ -0.5
GDH3	YAL062W	KEX1	P09620	729 aa		11.91	□□□□□ -0.5
GDH3	YAL062W	PGI1	P12709	554 aa	Known RBP	11.91	□□□□□ -0.5
GDH3	YAL062W	ACE2	P21192	770 aa		11.91	□□□□□ -0.5
GDH3	YAL062W	RXT2	P38255	430 aa		11.91	□□□□□ -0.5
GDH3	YAL062W	VPS30	Q02948	557 aa		11.91	□□□□□ -0.5
GDH3	YAL062W	GDE1	Q02979	1223 aa		11.91	□□□□□ -0.5
GDH3	YAL062W	PUS5	Q06244	254 aa		11.91	□□□□□ -0.5
GDH3	YAL062W	TUS1	Q06412	1307 aa		11.9	□□□□□ -0.5
GDH3	YAL062W	GAL2	P13181	574 aa		11.9	□□□□□ -0.5
GDH3	YAL062W	ARL1	P38116	183 aa	Known RBP	11.9	□□□□□ -0.5
GDH3	YAL062W	TPS3	P38426	1054 aa	Known RBP	11.9	□□□□□ -0.5
GDH3	YAL062W	TOM71	P38825	639 aa	Known RBP	11.9	□□□□□ -0.5
GDH3	YAL062W	PCI8	P40512	444 aa		11.9	□□□□□ -0.5
GDH3	YAL062W	CSR2	Q12734	1121 aa		11.9	□□□□□ -0.5
GDH3	YAL062W	AIM44	Q99299	758 aa		11.9	□□□□□ -0.5
GDH3	YAL062W	GSC2	P40989	1895 aa		11.89	□□□□□ -0.51
GDH3	YAL062W	TUB2	P02557	457 aa	Known RBP	11.89	□□□□□ -0.51
GDH3	YAL062W	SRP54	P20424	541 aa	Known RBP	11.89	□□□□□ -0.51
GDH3	YAL062W	MDM1	Q01846	1127 aa		11.89	□□□□□ -0.51
GDH3	YAL062W	YDR341C	Q05506	607 aa	Known RBP	11.89	□□□□□ -0.51
GDH3	YAL062W	DSE3	Q08729	430 aa		11.89	□□□□□ -0.51
GDH3	YAL062W	MET6	P05694	767 aa	Known RBP	11.88	□□□□□ -0.51
GDH3	YAL062W	CDC6	P09119	513 aa		11.88	□□□□□ -0.51
GDH3	YAL062W	ASF1	P32447	279 aa		11.88	□□□□□ -0.51
GDH3	YAL062W	PEA2	P40091	420 aa		11.88	□□□□□ -0.51
GDH3	YAL062W	CCT5	P40413	562 aa	Known RBP	11.88	□□□□□ -0.51
GDH3	YAL062W	RSM25	P40496	264 aa		11.88	□□□□□ -0.51
GDH3	YAL062W	PIL1	P53252	339 aa	Known RBP	11.88	□□□□□ -0.51
GDH3	YAL062W	FAR11	P53917	953 aa		11.88	□□□□□ -0.51
GDH3	YAL062W	LAP2	Q10740	671 aa		11.88	□□□□□ -0.51
GDH3	YAL062W	DCS2	Q12123	353 aa		11.88	□□□□□ -0.51
GDH3	YAL062W	CEX1	Q12453	761 aa		11.87	□□□□□ -0.51
GDH3	YAL062W	SPB4	P25808	606 aa	Predicted RBP	11.86	□□□□□ -0.51
GDH3	YAL062W	TIF4631	P39935	952 aa	Known RBP	11.86	□□□□□ -0.51
GDH3	YAL062W	CWC15	Q03772	175 aa	Known RBP	11.86	□□□□□ -0.51
GDH3	YAL062W	APC11	Q12157	165 aa		11.86	□□□□□ -0.51
GDH3	YAL062W	SAM2	P19358	384 aa	Known RBP	11.85	□□□□□ -0.51
GDH3	YAL062W	VPS1	P21576	704 aa	Known RBP	11.85	□□□□□ -0.51
GDH3	YAL062W	VPS45	P38932	577 aa		11.85	□□□□□ -0.51
GDH3	YAL062W	UBP9	P39967	754 aa		11.85	□□□□□ -0.51
GDH3	YAL062W	ETT1	Q08421	412 aa	Known RBP	11.85	□□□□□ -0.51
GDH3	YAL062W	GET3	Q12154	354 aa	Known RBP	11.85	□□□□□ -0.51
GDH3	YAL062W	ERG12	P07277	443 aa		11.84	□□□□□ -0.51
GDH3	YAL062W	FRS2	P15625	503 aa	Known RBP	11.84	□□□□□ -0.51
GDH3	YAL062W	RFT1	P38206	574 aa	Predicted RBP	11.84	□□□□□ -0.51
GDH3	YAL062W	CCT3	P39077	534 aa	Known RBP	11.84	□□□□□ -0.51
GDH3	YAL062W	YGL138C	P53122	345 aa		11.84	□□□□□ -0.51
GDH3	YAL062W	KRE33	P53914	1056 aa	Known RBP	11.84	□□□□□ -0.51
GDH3	YAL062W	DDP1	Q99321	188 aa	Known RBP	11.84	□□□□□ -0.51
GDH3	YAL062W	CIT1	P00890	479 aa		11.83	□□□□□ -0.52
GDH3	YAL062W	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.83	□□□□□ -0.52	not detected
GDH3	YAL062W	SEC20	P28791	383 aa		11.83	□□□□□ -0.52
GDH3	YAL062W	RPN12	P32496	274 aa		11.83	□□□□□ -0.52
GDH3	YAL062W	RVS167	P39743	482 aa	Known RBP	11.83	□□□□□ -0.52
GDH3	YAL062W	ACA1	P39970	489 aa		11.83	□□□□□ -0.52
GDH3	YAL062W	PEX21	P50091	288 aa		11.83	□□□□□ -0.52
GDH3	YAL062W	SOL4	P53315	255 aa		11.83	□□□□□ -0.52
GDH3	YAL062W	NAF1	P53919	492 aa	Known RBP	11.83	□□□□□ -0.52
GDH3	YAL062W	SPT21	P35209	758 aa		11.82	□□□□□ -0.52
GDH3	YAL062W	VHR2	P40041	505 aa		11.82	□□□□□ -0.52
GDH3	YAL062W	HXK1	P04806	485 aa	Known RBP	11.81	□□□□□ -0.52
GDH3	YAL062W	SUB2	Q07478	446 aa	Known RBP	11.81	□□□□□ -0.52
GDH3	YAL062W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.81	□□□□□ -0.52	not detected
GDH3	YAL062W	KRS1	P15180	591 aa	Known RBP	11.8	□□□□□ -0.52
GDH3	YAL062W	TPM2	P40414	161 aa		11.8	□□□□□ -0.52
GDH3	YAL062W	LSB1	P53281	241 aa		11.8	□□□□□ -0.52
GDH3	YAL062W	GIS4	Q04233	774 aa		11.8	□□□□□ -0.52
GDH3	YAL062W	CSC1	Q06538	782 aa		11.8	□□□□□ -0.52
GDH3	YAL062W	NBL1	Q3E7Y6	73 aa		11.8	□□□□□ -0.52
GDH3	YAL062W	MAK11	P20484	414 aa	Known RBP	11.79	□□□□□ -0.52
GDH3	YAL062W	KNS1	P32350	737 aa	Predicted RBP	11.79	□□□□□ -0.52
GDH3	YAL062W	DID4	P36108	232 aa		11.79	□□□□□ -0.52
GDH3	YAL062W	ASE1	P50275	885 aa		11.79	□□□□□ -0.52
GDH3	YAL062W	TIP41	Q12199	356 aa		11.79	□□□□□ -0.52
GDH3	YAL062W	GIN4	Q12263	1142 aa		11.79	□□□□□ -0.52
GDH3	YAL062W	RGP1	P16664	663 aa		11.79	□□□□□ -0.52
GDH3	YAL062W	PNT1	P38969	423 aa		11.79	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms