RNA–Protein interactions for RNA: YAL015C

NTG1, Transcript of DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase, yeast

Gene NTG1, Length 1,200 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTG1	YAL015C	SAC6	P32599	642 aa	Known RBP	7.58	□□□□□ -1.2
NTG1	YAL015C	SAP1	P39955	897 aa	Known RBP	7.58	□□□□□ -1.2
NTG1	YAL015C	BUD16	P39988	312 aa		7.58	□□□□□ -1.2
NTG1	YAL015C	HUL4	P40985	892 aa		7.58	□□□□□ -1.2
NTG1	YAL015C	BOP3	P53958	396 aa		7.58	□□□□□ -1.2
NTG1	YAL015C	YNL035C	P53962	389 aa	Known RBP	7.58	□□□□□ -1.2
NTG1	YAL015C	RMT2	Q03305	412 aa		7.58	□□□□□ -1.2
NTG1	YAL015C	PKH3	Q03306	898 aa	Predicted RBP	7.58	□□□□□ -1.2
NTG1	YAL015C	PRP3	Q03338	469 aa	Predicted RBP	7.58	□□□□□ -1.2
NTG1	YAL015C	YPR204W	Q08995	1032 aa		7.58	□□□□□ -1.2
NTG1	YAL015C	RUD3	Q12234	484 aa	Known RBP	7.58	□□□□□ -1.2
NTG1	YAL015C	OSH2	Q12451	1283 aa		7.58	□□□□□ -1.2
NTG1	YAL015C	LAM4	P38800	1345 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	SEC23	P15303	768 aa	Known RBP	7.57	□□□□□ -1.2
NTG1	YAL015C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	7.57	□□□□□ -1.2	not detected
NTG1	YAL015C	SWH1	P35845	1188 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	CUE3	P53137	624 aa	Known RBP	7.57	□□□□□ -1.2
NTG1	YAL015C	FAR11	P53917	953 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	ALD3	P54114	506 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	PKH1	Q03407	766 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	YMR196W	Q04336	1088 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	SFH1	Q06168	426 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	VAC14	Q06708	880 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	AFT2	Q08957	416 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	DCS2	Q12123	353 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	SSF2	Q12153	453 aa	Predicted RBP	7.57	□□□□□ -1.2
NTG1	YAL015C	LDB19	Q12502	818 aa		7.57	□□□□□ -1.2
NTG1	YAL015C	SRP54	P20424	541 aa	Known RBP	7.56	□□□□□ -1.2
NTG1	YAL015C	URA1	P28272	314 aa	Predicted RBP	7.56	□□□□□ -1.2
NTG1	YAL015C	SEC65	P29478	273 aa		7.56	□□□□□ -1.2
NTG1	YAL015C	ECM32	P32644	1121 aa	Known RBP	7.56	□□□□□ -1.2
NTG1	YAL015C	NFU1	P32860	256 aa		7.56	□□□□□ -1.2
NTG1	YAL015C	EAP1	P36041	632 aa	Known RBP	7.56	□□□□□ -1.2
NTG1	YAL015C	BYE1	P36106	594 aa		7.56	□□□□□ -1.2
NTG1	YAL015C	EFM2	P38347	419 aa		7.56	□□□□□ -1.2
NTG1	YAL015C	RPN10	P38886	268 aa	Known RBP	7.56	□□□□□ -1.2
NTG1	YAL015C	SPT8	P38915	602 aa		7.56	□□□□□ -1.2
NTG1	YAL015C	YNL193W	P53870	558 aa		7.56	□□□□□ -1.2
NTG1	YAL015C	VTC3	Q02725	835 aa		7.56	□□□□□ -1.2
NTG1	YAL015C	SSP2	Q08646	371 aa		7.56	□□□□□ -1.2
NTG1	YAL015C	SNU66	Q12420	587 aa	Predicted RBP	7.56	□□□□□ -1.2
NTG1	YAL015C	AIR2	Q12476	344 aa	Known RBP	7.56	□□□□□ -1.2
NTG1	YAL015C	HCA4	P20448	770 aa	Known RBP	7.55	□□□□□ -1.2
NTG1	YAL015C	MET1	P36150	593 aa		7.55	□□□□□ -1.2
NTG1	YAL015C	MCX1	P38323	520 aa	Predicted RBP	7.55	□□□□□ -1.2
NTG1	YAL015C	CRG1	P38892	291 aa	RIP-Chip data	7.55	□□□□□ -1.2	RIP-Chip
NTG1	YAL015C	VPS8	P39702	1274 aa		7.55	□□□□□ -1.2
NTG1	YAL015C	YMR147W	P40218	223 aa	Known RBP	7.55	□□□□□ -1.2
NTG1	YAL015C	FYV8	P46949	817 aa	Known RBP	7.55	□□□□□ -1.2
NTG1	YAL015C	UBP16	Q02863	499 aa		7.55	□□□□□ -1.2
NTG1	YAL015C	FCP1	Q03254	732 aa		7.55	□□□□□ -1.2
NTG1	YAL015C	VPS72	Q03388	795 aa		7.55	□□□□□ -1.2
NTG1	YAL015C	EST2	Q06163	884 aa		7.55	□□□□□ -1.2
NTG1	YAL015C	YOR223W	Q12015	292 aa		7.55	□□□□□ -1.2
NTG1	YAL015C	HMI1	Q12039	706 aa		7.55	□□□□□ -1.2
NTG1	YAL015C	TAH18	Q12181	623 aa		7.55	□□□□□ -1.2
NTG1	YAL015C	BMH1	P29311	267 aa	Known RBP	7.54	□□□□□ -1.2
NTG1	YAL015C	PTC3	P34221	468 aa	Known RBP	7.54	□□□□□ -1.2
NTG1	YAL015C	YET1	P35723	206 aa		7.54	□□□□□ -1.2
NTG1	YAL015C	SHM1	P37292	490 aa	Predicted RBP	7.54	□□□□□ -1.2
NTG1	YAL015C	CTM1	P38818	585 aa		7.54	□□□□□ -1.2
NTG1	YAL015C	SMF1	P38925	575 aa		7.54	□□□□□ -1.2
NTG1	YAL015C	AKR1	P39010	764 aa		7.54	□□□□□ -1.2
NTG1	YAL015C	MIC19	P43594	170 aa		7.54	□□□□□ -1.2
NTG1	YAL015C	YJR079W	P47126	109 aa		7.54	□□□□□ -1.2
NTG1	YAL015C	YBP2	P53169	641 aa		7.54	□□□□□ -1.2
NTG1	YAL015C	ADE16	P54113	591 aa	Known RBP	7.54	□□□□□ -1.2
NTG1	YAL015C	SPN1	Q06505	410 aa	Predicted RBP	7.54	□□□□□ -1.2
NTG1	YAL015C	SWI3	P32591	825 aa		7.53	□□□□□ -1.2
NTG1	YAL015C	CNS1	P33313	385 aa		7.53	□□□□□ -1.2
NTG1	YAL015C	RER2	P35196	286 aa		7.53	□□□□□ -1.2
NTG1	YAL015C	ATG3	P40344	310 aa		7.53	□□□□□ -1.2
NTG1	YAL015C	EFM4	P40516	257 aa		7.53	□□□□□ -1.2
NTG1	YAL015C	ERG5	P54781	538 aa		7.53	□□□□□ -1.2
NTG1	YAL015C	NOP6	Q07623	225 aa	Known RBP	7.53	□□□□□ -1.2
NTG1	YAL015C	NUR1	Q12066	484 aa		7.53	□□□□□ -1.2
NTG1	YAL015C	RSF2	P46974	1380 aa		7.53	□□□□□ -1.2
NTG1	YAL015C	SAC3	P46674	1301 aa		7.52	□□□□□ -1.2
NTG1	YAL015C	CDC37	P06101	506 aa	Known RBP	7.52	□□□□□ -1.21
NTG1	YAL015C	RAD1	P06777	1100 aa		7.52	□□□□□ -1.21
NTG1	YAL015C	CDC6	P09119	513 aa		7.52	□□□□□ -1.21
NTG1	YAL015C	RPS6A	P0CX37	236 aa	Known RBP	7.52	□□□□□ -1.21
NTG1	YAL015C	RPS6B	P0CX38	236 aa	Predicted RBP	7.52	□□□□□ -1.21
NTG1	YAL015C	MTF2	P10849	440 aa		7.52	□□□□□ -1.21
NTG1	YAL015C	ARG8	P18544	423 aa		7.52	□□□□□ -1.21
NTG1	YAL015C	SPO11	P23179	398 aa		7.52	□□□□□ -1.21
NTG1	YAL015C	SWI4	P25302	1093 aa	Known RBP	7.52	□□□□□ -1.21
NTG1	YAL015C	BMH2	P34730	273 aa	Known RBP	7.52	□□□□□ -1.21
NTG1	YAL015C	DCW1	P36091	449 aa		7.52	□□□□□ -1.21
NTG1	YAL015C	YGR237C	P50089	785 aa		7.52	□□□□□ -1.21
NTG1	YAL015C	STE23	Q06010	1027 aa		7.52	□□□□□ -1.21
NTG1	YAL015C	GET3	Q12154	354 aa	Known RBP	7.52	□□□□□ -1.21
NTG1	YAL015C	PUS1	Q12211	544 aa	Known RBP	7.52	□□□□□ -1.21
NTG1	YAL015C	SEC39	Q12745	709 aa		7.52	□□□□□ -1.21
NTG1	YAL015C	ARD1	P07347	238 aa	Predicted RBP	7.51	□□□□□ -1.21
NTG1	YAL015C	VPS1	P21576	704 aa	Known RBP	7.51	□□□□□ -1.21
NTG1	YAL015C	DAL7	P21826	554 aa		7.51	□□□□□ -1.21
NTG1	YAL015C	MCM3	P24279	971 aa	Known RBP	7.51	□□□□□ -1.21
NTG1	YAL015C	SRB4	P32569	687 aa		7.51	□□□□□ -1.21
NTG1	YAL015C	PTC4	P38089	393 aa		7.51	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms