RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 LCB1P25045 558 aaKnown RBP9.76□□□□□ -0.85
LSR1LSR1 BOI1P38041 980 aaKnown RBP9.76□□□□□ -0.85
LSR1LSR1 CSM2P40465 213 aa9.76□□□□□ -0.85
LSR1LSR1 PCI8P40512 444 aa9.76□□□□□ -0.85
LSR1LSR1 RPT4P53549 437 aaKnown RBP9.76□□□□□ -0.85
LSR1LSR1 YCG1Q06680 1035 aa9.76□□□□□ -0.85
LSR1LSR1 AFT2Q08957 416 aa9.76□□□□□ -0.85
LSR1LSR1 BUG1Q12191 341 aa9.76□□□□□ -0.85
LSR1LSR1 PDC1P06169 563 aaKnown RBP9.75□□□□□ -0.85
LSR1LSR1 SSA2P10592 639 aaKnown RBP9.75□□□□□ -0.85
LSR1LSR1 STE11P23561 717 aa9.75□□□□□ -0.85
LSR1LSR1 RPT3P33298 428 aaKnown RBP9.75□□□□□ -0.85
LSR1LSR1 PTK1P36002 662 aaPredicted RBP9.75□□□□□ -0.85
LSR1LSR1 ADE17P38009 592 aaKnown RBP9.75□□□□□ -0.85
LSR1LSR1 OSW7P43611 510 aa9.75□□□□□ -0.85
LSR1LSR1 YJL181WP46987 611 aa9.75□□□□□ -0.85
LSR1LSR1 SMC3P47037 1230 aa9.75□□□□□ -0.85
LSR1LSR1 UTP22P53254 1237 aaPredicted RBP9.75□□□□□ -0.85
LSR1LSR1 IRC4Q03036 179 aa9.75□□□□□ -0.85
LSR1LSR1 YOR111WQ99210 232 aa9.75□□□□□ -0.85
LSR1LSR1 MYO1P08964 1928 aa9.75□□□□□ -0.85
LSR1LSR1 RNR3P21672 869 aaKnown RBP9.74□□□□□ -0.85
LSR1LSR1 MAK31P23059 88 aa9.74□□□□□ -0.85
LSR1LSR1 RTS1P38903 757 aa9.74□□□□□ -0.85
LSR1LSR1 CCC2P38995 1004 aa9.74□□□□□ -0.85
LSR1LSR1 MSH4P40965 878 aaPredicted RBP9.74□□□□□ -0.85
LSR1LSR1 GDE1Q02979 1223 aa9.74□□□□□ -0.85
LSR1LSR1 VPS60Q03390 229 aa9.74□□□□□ -0.85
LSR1LSR1 MYO5Q04439 1219 aaKnown RBP9.74□□□□□ -0.85
LSR1LSR1 GFD1Q04839 188 aaKnown RBP9.74□□□□□ -0.85
LSR1LSR1 MMR1Q06324 491 aa9.74□□□□□ -0.85
LSR1LSR1 CSC1Q06538 782 aa9.74□□□□□ -0.85
LSR1LSR1 BDF2Q07442 638 aa9.74□□□□□ -0.85
LSR1LSR1 MRC1P25588 1096 aa9.73□□□□□ -0.85
LSR1LSR1 SHM1P37292 490 aaPredicted RBP9.73□□□□□ -0.85
LSR1LSR1 MAL31P38156 614 aa9.73□□□□□ -0.85
LSR1LSR1 RTT107P38850 1070 aa9.73□□□□□ -0.85
LSR1LSR1 LYS14P40971 790 aa9.73□□□□□ -0.85
LSR1LSR1 YGR130CP53278 816 aa9.73□□□□□ -0.85
LSR1LSR1 RIX7Q07844 837 aaKnown RBP9.73□□□□□ -0.85
LSR1LSR1 SNF3P10870 884 aa9.72□□□□□ -0.85
LSR1LSR1 PET123P17558 318 aa9.72□□□□□ -0.85
LSR1LSR1 KRE2P27809 442 aa9.72□□□□□ -0.85
LSR1LSR1 SAC6P32599 642 aaKnown RBP9.72□□□□□ -0.85
LSR1LSR1 PRP31P49704 494 aaPredicted RBP9.72□□□□□ -0.85
LSR1LSR1 HCR1Q05775 265 aaKnown RBP9.72□□□□□ -0.85
LSR1LSR1 MCM16Q12262 181 aa9.72□□□□□ -0.85
LSR1LSR1 MET6P05694 767 aaKnown RBP9.71□□□□□ -0.86
LSR1LSR1 ALG1P16661 449 aa9.71□□□□□ -0.86
LSR1LSR1 UBC1P21734 215 aaKnown RBP9.71□□□□□ -0.86
LSR1LSR1 PRO3P32263 286 aaKnown RBP9.71□□□□□ -0.86
LSR1LSR1 YET1P35723 206 aa9.71□□□□□ -0.86
LSR1LSR1 YFH7P43591 353 aa9.71□□□□□ -0.86
LSR1LSR1 YGL138CP53122 345 aa9.71□□□□□ -0.86
LSR1LSR1 CAF130P53280 1122 aaPredicted RBP9.71□□□□□ -0.86
LSR1LSR1 ALF1P53904 254 aa9.71□□□□□ -0.86
LSR1LSR1 NAF1P53919 492 aaKnown RBP9.71□□□□□ -0.86
LSR1LSR1 RIT1P23796 513 aa9.7□□□□□ -0.86
LSR1LSR1 HIR1P32479 840 aa9.7□□□□□ -0.86
LSR1LSR1 FRD1P32614 470 aaKnown RBP9.7□□□□□ -0.86
LSR1LSR1 BCD1P38772 366 aa9.7□□□□□ -0.86
LSR1LSR1 YGR237CP50089 785 aa9.7□□□□□ -0.86
LSR1LSR1 EIS1Q05050 843 aaKnown RBP9.7□□□□□ -0.86
LSR1LSR1 MRD1Q06106 887 aaKnown RBP9.7□□□□□ -0.86
LSR1LSR1 CEX1Q12453 761 aa9.7□□□□□ -0.86
LSR1LSR1 RAD61Q99359 647 aa9.7□□□□□ -0.86
LSR1LSR1 HIS4P00815 799 aaKnown RBP9.69□□□□□ -0.86
LSR1LSR1 SEC65P29478 273 aa9.69□□□□□ -0.86
LSR1LSR1 BDF1P35817 686 aa9.69□□□□□ -0.86
LSR1LSR1 TOS1P38288 455 aa9.69□□□□□ -0.86
LSR1LSR1 MGA2P40578 1113 aa9.69□□□□□ -0.86
LSR1LSR1 DAK2P43550 591 aa9.69□□□□□ -0.86
LSR1LSR1 APT1P49435 187 aaKnown RBP9.69□□□□□ -0.86
LSR1LSR1 LSC2P53312 427 aa9.69□□□□□ -0.86
LSR1LSR1 NSG2P53898 299 aa9.69□□□□□ -0.86
LSR1LSR1 TOS4Q06266 489 aa9.69□□□□□ -0.86
LSR1LSR1 YOR296WQ08748 1289 aa9.69□□□□□ -0.86
LSR1LSR1 NBL1Q3E7Y6 73 aa9.69□□□□□ -0.86
LSR1LSR1 RPS6AP0CX37 236 aaKnown RBP9.68□□□□□ -0.86
LSR1LSR1 RPS6BP0CX38 236 aaPredicted RBP9.68□□□□□ -0.86
LSR1LSR1 CAF20P12962 161 aaKnown RBP9.68□□□□□ -0.86
LSR1LSR1 SPO11P23179 398 aa9.68□□□□□ -0.86
LSR1LSR1 MSH3P25336 1018 aa9.68□□□□□ -0.86
LSR1LSR1 RRP43P25359 394 aaPredicted RBP9.68□□□□□ -0.86
LSR1LSR1 MDL2P33311 773 aa9.68□□□□□ -0.86
LSR1LSR1 SAP190P36123 1033 aa9.68□□□□□ -0.86
LSR1LSR1 SEC9P40357 651 aa9.68□□□□□ -0.86
LSR1LSR1 ALG2P43636 503 aa9.68□□□□□ -0.86
LSR1LSR1 AIP1P46680 615 aaKnown RBP9.68□□□□□ -0.86
LSR1LSR1 LYS4P49367 693 aaPredicted RBP9.68□□□□□ -0.86
LSR1LSR1 VPS38Q05919 439 aa9.68□□□□□ -0.86
LSR1LSR1 NOP14Q99207 810 aaKnown RBP9.68□□□□□ -0.86
LSR1LSR1 SEC23P15303 768 aaKnown RBP9.67□□□□□ -0.86
LSR1LSR1 STO1P34160 861 aaKnown RBP9.67□□□□□ -0.86
LSR1LSR1 CTM1P38818 585 aa9.67□□□□□ -0.86
LSR1LSR1 VID27P40157 782 aa9.67□□□□□ -0.86
LSR1LSR1 BOP3P53958 396 aa9.67□□□□□ -0.86
LSR1LSR1 YDR341CQ05506 607 aaKnown RBP9.67□□□□□ -0.86
LSR1LSR1 PSR2Q07949 397 aa9.67□□□□□ -0.86
LSR1LSR1 HMI1Q12039 706 aa9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms