RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 L1TD1Q5T7N2 865 aaKnown RBP17.34■□□□□ 0.37
PHGDH-233ENST00000642021 KIF2CQ99661 725 aa17.34■□□□□ 0.37
PHGDH-233ENST00000642021 FSD2A1L4K1 749 aa17.34■□□□□ 0.37
PHGDH-233ENST00000642021 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
PHGDH-233ENST00000642021 BMP2KLQ5H9B9 411 aa17.34■□□□□ 0.37
PHGDH-233ENST00000642021 CDC42BPGQ6DT37 1551 aa17.34■□□□□ 0.37
PHGDH-233ENST00000642021 NCKAP5LQ9HCH0 1330 aa17.33■□□□□ 0.36
PHGDH-233ENST00000642021 C8orf58Q8NAV2 365 aa17.33■□□□□ 0.36
PHGDH-233ENST00000642021 ARHGAP45Q92619 1136 aa17.33■□□□□ 0.36
PHGDH-233ENST00000642021 FAM83GA6ND36 823 aa17.33■□□□□ 0.36
PHGDH-233ENST00000642021 SNX21Q969T3 373 aa17.32■□□□□ 0.36
PHGDH-233ENST00000642021 PANK2Q9BZ23 570 aa17.32■□□□□ 0.36
PHGDH-233ENST00000642021 RRAGDQ9NQL2 400 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-233ENST00000642021 IFT57Q9NWB7 429 aa17.32■□□□□ 0.36
PHGDH-233ENST00000642021 CD2BP2O95400 341 aaKnown RBP17.32■□□□□ 0.36
PHGDH-233ENST00000642021 GNAI1P63096 354 aa17.32■□□□□ 0.36
PHGDH-233ENST00000642021 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
PHGDH-233ENST00000642021 NCOA3Q9Y6Q9 1424 aa17.32■□□□□ 0.36
PHGDH-233ENST00000642021 PIK3R4Q99570 1358 aa17.31■□□□□ 0.36
PHGDH-233ENST00000642021 GOLGA6L3A6NEY3 463 aa17.31■□□□□ 0.36
PHGDH-233ENST00000642021 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
PHGDH-233ENST00000642021 DCTN1Q14203 1278 aa17.31■□□□□ 0.36
PHGDH-233ENST00000642021 RRS1Q15050 365 aaKnown RBP17.31■□□□□ 0.36
PHGDH-233ENST00000642021 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-233ENST00000642021 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
PHGDH-233ENST00000642021 ABCC4O15439 1325 aa17.3■□□□□ 0.36
PHGDH-233ENST00000642021 TBC1D9Q6ZT07 1266 aa17.3■□□□□ 0.36
PHGDH-233ENST00000642021 RBM42Q9BTD8 480 aaKnown RBP17.3■□□□□ 0.36
PHGDH-233ENST00000642021 ATP7BP35670 1465 aa17.29■□□□□ 0.36
PHGDH-233ENST00000642021 CFAP44Q96MT7 982 aa17.28■□□□□ 0.36
PHGDH-233ENST00000642021 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
PHGDH-233ENST00000642021 WASLO00401 505 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-233ENST00000642021 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
PHGDH-233ENST00000642021 TNPO1Q92973 898 aaKnown RBP17.28■□□□□ 0.36
PHGDH-233ENST00000642021 CPSF1Q10570 1443 aaKnown RBP17.28■□□□□ 0.36
PHGDH-233ENST00000642021 FOXD4L1Q9NU39 408 aa17.28■□□□□ 0.36
PHGDH-233ENST00000642021 TXNDC2Q86VQ3 553 aa17.27■□□□□ 0.36
PHGDH-233ENST00000642021 A2ML1A8K2U0 1454 aa17.26■□□□□ 0.35
PHGDH-233ENST00000642021 HSP90AB1P08238 724 aaKnown RBP17.26■□□□□ 0.35
PHGDH-233ENST00000642021 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
PHGDH-233ENST00000642021 EDC4Q6P2E9 1401 aaKnown RBP17.25■□□□□ 0.35
PHGDH-233ENST00000642021 RIMS2Q9UQ26 1411 aa17.25■□□□□ 0.35
PHGDH-233ENST00000642021 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
PHGDH-233ENST00000642021 KRT24Q2M2I5 525 aa17.25■□□□□ 0.35
PHGDH-233ENST00000642021 CHMP4BQ9H444 224 aaKnown RBP17.25■□□□□ 0.35
PHGDH-233ENST00000642021 METP08581 1390 aa17.25■□□□□ 0.35
PHGDH-233ENST00000642021 DLC1Q96QB1 1528 aa17.24■□□□□ 0.35
PHGDH-233ENST00000642021 DDX11L8A8MPP1 907 aa17.24■□□□□ 0.35
PHGDH-233ENST00000642021 MLECQ14165 292 aa17.24■□□□□ 0.35
PHGDH-233ENST00000642021 C16orf71Q8IYS4 520 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-233ENST00000642021 COG3Q96JB2 828 aa17.23■□□□□ 0.35
PHGDH-233ENST00000642021 CPS1P31327 1500 aa17.23■□□□□ 0.35
PHGDH-233ENST00000642021 RAB3GAP1Q15042 981 aa17.23■□□□□ 0.35
PHGDH-233ENST00000642021 AEBP1Q8IUX7 1158 aa17.23■□□□□ 0.35
PHGDH-233ENST00000642021 AATKQ6ZMQ8 1374 aa17.23■□□□□ 0.35
PHGDH-233ENST00000642021 PLEKHM2Q8IWE5 1019 aa17.23■□□□□ 0.35
PHGDH-233ENST00000642021 API5Q9BZZ5 524 aaKnown RBP17.23■□□□□ 0.35
PHGDH-233ENST00000642021 CDK12Q9NYV4 1490 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-233ENST00000642021 CIZ1Q9ULV3 898 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-233ENST00000642021 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
PHGDH-233ENST00000642021 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-233ENST00000642021 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
PHGDH-233ENST00000642021 GAS2L2Q8NHY3 880 aa17.21■□□□□ 0.35
PHGDH-233ENST00000642021 DCTPP1Q9H773 170 aa17.21■□□□□ 0.35
PHGDH-233ENST00000642021 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
PHGDH-233ENST00000642021 MRE11P49959 708 aa17.2■□□□□ 0.34
PHGDH-233ENST00000642021 FAM69CQ0P6D2 419 aa17.2■□□□□ 0.34
PHGDH-233ENST00000642021 GAS2L3Q86XJ1 694 aa17.2■□□□□ 0.34
PHGDH-233ENST00000642021 OTUD7AQ8TE49 926 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-233ENST00000642021 CDC45O75419 566 aa17.19■□□□□ 0.34
PHGDH-233ENST00000642021 HSP90AA1P07900 732 aaKnown RBP17.19■□□□□ 0.34
PHGDH-233ENST00000642021 GRPEL1Q9HAV7 217 aa17.19■□□□□ 0.34
PHGDH-233ENST00000642021 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
PHGDH-233ENST00000642021 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
PHGDH-233ENST00000642021 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
PHGDH-233ENST00000642021 SETD1AO15047 1707 aaKnown RBP17.19■□□□□ 0.34
PHGDH-233ENST00000642021 PRR36Q9H6K5 1346 aa17.19■□□□□ 0.34
PHGDH-233ENST00000642021 SULT6B1Q6IMI4 303 aa17.18■□□□□ 0.34
PHGDH-233ENST00000642021 INTS3Q68E01 1043 aaKnown RBP17.18■□□□□ 0.34
PHGDH-233ENST00000642021 SSFA2P28290 1259 aa17.17■□□□□ 0.34
PHGDH-233ENST00000642021 EIF4A2Q14240 407 aaKnown RBP17.17■□□□□ 0.34
PHGDH-233ENST00000642021 MCM10Q7L590 875 aa17.17■□□□□ 0.34
PHGDH-233ENST00000642021 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
PHGDH-233ENST00000642021 DLG5Q8TDM6 1919 aa17.17■□□□□ 0.34
PHGDH-233ENST00000642021 GBP4Q96PP9 640 aa17.17■□□□□ 0.34
PHGDH-233ENST00000642021 TTC22Q5TAA0 569 aa17.16■□□□□ 0.34
PHGDH-233ENST00000642021 RGS12O14924 1447 aa17.16■□□□□ 0.34
PHGDH-233ENST00000642021 CHL1O00533 1208 aa17.15■□□□□ 0.34
PHGDH-233ENST00000642021 SMARCA5O60264 1052 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-233ENST00000642021 ANKRD44Q8N8A2 993 aa17.15■□□□□ 0.34
PHGDH-233ENST00000642021 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
PHGDH-233ENST00000642021 APBB1O00213 710 aa17.15■□□□□ 0.34
PHGDH-233ENST00000642021 ATP10DQ9P241 1426 aa17.14■□□□□ 0.33
PHGDH-233ENST00000642021 CEP85Q6P2H3 762 aa17.14■□□□□ 0.33
PHGDH-233ENST00000642021 NRXN3Q9Y4C0 1643 aa17.14■□□□□ 0.33
PHGDH-233ENST00000642021 KIF24Q5T7B8 1368 aa17.14■□□□□ 0.33
PHGDH-233ENST00000642021 SPATA31D1Q6ZQQ2 1576 aa17.14■□□□□ 0.33
PHGDH-233ENST00000642021 NUTM2FA1L443 756 aa17.13■□□□□ 0.33
PHGDH-233ENST00000642021 MEIS3Q99687 375 aa17.13■□□□□ 0.33
PHGDH-233ENST00000642021 USP26Q9BXU7 913 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms