RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 PRKAR2BP31323 418 aa23.17■■□□□ 1.3
PHGDH-232ENST00000641947 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
PHGDH-232ENST00000641947 DUSP27Q5VZP5 1158 aa23.17■■□□□ 1.3
PHGDH-232ENST00000641947 KIF24Q5T7B8 1368 aa23.16■■□□□ 1.3
PHGDH-232ENST00000641947 HOXC9P31274 260 aa23.16■■□□□ 1.3
PHGDH-232ENST00000641947 SLAIN2Q9P270 581 aa23.16■■□□□ 1.3
PHGDH-232ENST00000641947 RGPD2P0DJD1 1756 aa23.16■■□□□ 1.3
PHGDH-232ENST00000641947 NPHP3Q7Z494 1330 aa23.16■■□□□ 1.3
PHGDH-232ENST00000641947 NHSL1Q5SYE7 1610 aa23.15■■□□□ 1.3
PHGDH-232ENST00000641947 RGPD5Q99666 1765 aa23.15■■□□□ 1.3
PHGDH-232ENST00000641947 TMPOP42166 694 aaKnown RBP23.15■■□□□ 1.3
PHGDH-232ENST00000641947 AMPHP49418 695 aa23.15■■□□□ 1.3
PHGDH-232ENST00000641947 SLFN5Q08AF3 891 aa23.15■■□□□ 1.3
PHGDH-232ENST00000641947 AEBP1Q8IUX7 1158 aa23.15■■□□□ 1.3
PHGDH-232ENST00000641947 TRMT2AQ8IZ69 625 aaKnown RBP23.15■■□□□ 1.3
PHGDH-232ENST00000641947 MAPK8IP3Q9UPT6 1336 aa23.15■■□□□ 1.3
PHGDH-232ENST00000641947 LMOD2Q6P5Q4 547 aa23.14■■□□□ 1.3
PHGDH-232ENST00000641947 PHACTR3Q96KR7 559 aa23.14■■□□□ 1.3
PHGDH-232ENST00000641947 TNS3Q68CZ2 1445 aa23.14■■□□□ 1.3
PHGDH-232ENST00000641947 RTL1A6NKG5 1358 aa23.14■■□□□ 1.29
PHGDH-232ENST00000641947 FKBP8Q14318 412 aa23.14■■□□□ 1.29
PHGDH-232ENST00000641947 CCDC27Q2M243 656 aa23.14■■□□□ 1.29
PHGDH-232ENST00000641947 PLEKHG5O94827 1062 aa23.13■■□□□ 1.29
PHGDH-232ENST00000641947 NCBP3Q53F19 620 aaKnown RBP23.12■■□□□ 1.29
PHGDH-232ENST00000641947 TRIM35Q9UPQ4 493 aa23.12■■□□□ 1.29
PHGDH-232ENST00000641947 ARHGEF10O15013 1369 aa23.11■■□□□ 1.29
PHGDH-232ENST00000641947 GCP02774 474 aa23.11■■□□□ 1.29
PHGDH-232ENST00000641947 KCNH5Q8NCM2 988 aa23.11■■□□□ 1.29
PHGDH-232ENST00000641947 RNF123Q5XPI4 1314 aa23.11■■□□□ 1.29
PHGDH-232ENST00000641947 IRX6P78412 446 aaPredicted RBP23.1■■□□□ 1.29
PHGDH-232ENST00000641947 SULT6B1Q6IMI4 303 aa23.1■■□□□ 1.29
PHGDH-232ENST00000641947 PNNQ9H307 717 aaKnown RBP23.1■■□□□ 1.29
PHGDH-232ENST00000641947 SPATA31A3Q5VYP0 1347 aa23.09■■□□□ 1.29
PHGDH-232ENST00000641947 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.29
PHGDH-232ENST00000641947 ABCA3Q99758 1704 aa23.08■■□□□ 1.29
PHGDH-232ENST00000641947 COL18A1P39060 1754 aa23.07■■□□□ 1.28
PHGDH-232ENST00000641947 KDRP35968 1356 aa23.07■■□□□ 1.28
PHGDH-232ENST00000641947 E9PSI1 815 aa23.07■■□□□ 1.28
PHGDH-232ENST00000641947 ARHGEF25Q86VW2 580 aa23.07■■□□□ 1.28
PHGDH-232ENST00000641947 IP6K1Q92551 441 aa23.07■■□□□ 1.28
PHGDH-232ENST00000641947 EYA1Q99502 592 aa23.07■■□□□ 1.28
PHGDH-232ENST00000641947 NEFLP07196 543 aa23.06■■□□□ 1.28
PHGDH-232ENST00000641947 RIPK4P57078 832 aa23.06■■□□□ 1.28
PHGDH-232ENST00000641947 WDR63Q8IWG1 891 aa23.06■■□□□ 1.28
PHGDH-232ENST00000641947 RCAN3Q9UKA8 241 aa23.06■■□□□ 1.28
PHGDH-232ENST00000641947 SOS2Q07890 1332 aaPredicted RBP23.06■■□□□ 1.28
PHGDH-232ENST00000641947 ROBO1Q9Y6N7 1651 aa23.06■■□□□ 1.28
PHGDH-232ENST00000641947 NFE2L2Q16236 605 aa23.05■■□□□ 1.28
PHGDH-232ENST00000641947 ZBTB7CA1YPR0 619 aa23.04■■□□□ 1.28
PHGDH-232ENST00000641947 LTV1Q96GA3 475 aaPredicted RBP23.04■■□□□ 1.28
PHGDH-232ENST00000641947 CAMTA1Q9Y6Y1 1673 aa23.03■■□□□ 1.28
PHGDH-232ENST00000641947 CABLES1Q8TDN4 633 aa23.03■■□□□ 1.28
PHGDH-232ENST00000641947 NEFMP07197 916 aa23■■□□□ 1.27
PHGDH-232ENST00000641947 ZC3H6P61129 1189 aaKnown RBP22.99■■□□□ 1.27
PHGDH-232ENST00000641947 AXIN2Q9Y2T1 843 aa22.99■■□□□ 1.27
PHGDH-232ENST00000641947 LMO7Q8WWI1 1683 aa22.98■■□□□ 1.27
PHGDH-232ENST00000641947 RRP1P56182 461 aaKnown RBP22.98■■□□□ 1.27
PHGDH-232ENST00000641947 USHBP1Q8N6Y0 703 aa22.98■■□□□ 1.27
PHGDH-232ENST00000641947 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
PHGDH-232ENST00000641947 NBPF6Q5VWK0 638 aa22.96■■□□□ 1.27
PHGDH-232ENST00000641947 NBPF4Q96M43 638 aa22.96■■□□□ 1.27
PHGDH-232ENST00000641947 NCAPD2Q15021 1401 aa22.96■■□□□ 1.27
PHGDH-232ENST00000641947 AHDC1Q5TGY3 1603 aaPredicted RBP22.96■■□□□ 1.27
PHGDH-232ENST00000641947 FAM83GA6ND36 823 aa22.95■■□□□ 1.26
PHGDH-232ENST00000641947 TSR2Q969E8 191 aaKnown RBP22.95■■□□□ 1.26
PHGDH-232ENST00000641947 LRRC59Q96AG4 307 aaKnown RBP22.95■■□□□ 1.26
PHGDH-232ENST00000641947 IL16Q14005 1332 aa22.95■■□□□ 1.26
PHGDH-232ENST00000641947 FANCIQ9NVI1 1328 aa22.95■■□□□ 1.26
PHGDH-232ENST00000641947 ABCC6O95255 1503 aa22.94■■□□□ 1.26
PHGDH-232ENST00000641947 MTHFSDQ2M296 383 aaKnown RBP22.93■■□□□ 1.26
PHGDH-232ENST00000641947 ANKRD24Q8TF21 1146 aa22.93■■□□□ 1.26
PHGDH-232ENST00000641947 FAM208AQ9UK61 1670 aaKnown RBP22.93■■□□□ 1.26
PHGDH-232ENST00000641947 KIAA0232Q92628 1395 aa22.93■■□□□ 1.26
PHGDH-232ENST00000641947 MYH16Q9H6N6 1097 aa22.92■■□□□ 1.26
PHGDH-232ENST00000641947 CPDO75976 1380 aa22.92■■□□□ 1.26
PHGDH-232ENST00000641947 DCTN1Q14203 1278 aa22.91■■□□□ 1.26
PHGDH-232ENST00000641947 PLIN1O60240 522 aa22.91■■□□□ 1.26
PHGDH-232ENST00000641947 LRRC37A3O60309 1634 aa22.9■■□□□ 1.26
PHGDH-232ENST00000641947 VIRMAQ69YN4 1812 aaKnown RBP22.9■■□□□ 1.26
PHGDH-232ENST00000641947 ERBB3P21860 1342 aa22.9■■□□□ 1.26
PHGDH-232ENST00000641947 CHRNA2Q15822 529 aa22.89■■□□□ 1.26
PHGDH-232ENST00000641947 LMOD3Q0VAK6 560 aa22.88■■□□□ 1.25
PHGDH-232ENST00000641947 PHLPP1O60346 1717 aa22.87■■□□□ 1.25
PHGDH-232ENST00000641947 BCAR3O75815 825 aa22.87■■□□□ 1.25
PHGDH-232ENST00000641947 COL22A1Q8NFW1 1626 aaPredicted RBP22.87■■□□□ 1.25
PHGDH-232ENST00000641947 COL16A1Q07092 1604 aaPredicted RBP22.87■■□□□ 1.25
PHGDH-232ENST00000641947 ZNF853P0CG23 659 aa22.86■■□□□ 1.25
PHGDH-232ENST00000641947 MCM10Q7L590 875 aa22.86■■□□□ 1.25
PHGDH-232ENST00000641947 EXOSC9Q06265 439 aaKnown RBP22.86■■□□□ 1.25
PHGDH-232ENST00000641947 ERICH6BQ5W0A0 696 aa22.84■■□□□ 1.25
PHGDH-232ENST00000641947 IFT57Q9NWB7 429 aa22.84■■□□□ 1.25
PHGDH-232ENST00000641947 CRB1P82279 1406 aa22.84■■□□□ 1.25
PHGDH-232ENST00000641947 GAS2L2Q8NHY3 880 aa22.84■■□□□ 1.25
PHGDH-232ENST00000641947 LAS1LQ9Y4W2 734 aaKnown RBP22.84■■□□□ 1.25
PHGDH-232ENST00000641947 C20orf194Q5TEA3 1177 aa22.83■■□□□ 1.24
PHGDH-232ENST00000641947 RARSP54136 660 aaKnown RBP22.82■■□□□ 1.24
PHGDH-232ENST00000641947 MBIPQ9NS73 344 aa22.82■■□□□ 1.24
PHGDH-232ENST00000641947 CALD1Q05682 793 aaKnown RBP22.81■■□□□ 1.24
PHGDH-232ENST00000641947 GNAI1P63096 354 aa22.81■■□□□ 1.24
PHGDH-232ENST00000641947 CFAP44Q96MT7 982 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms