RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 TBC1D9Q6ZT07 1266 aa10.18□□□□□ -0.78
HNRNPU-222ENST00000639880 WASLO00401 505 aaPredicted RBP10.17□□□□□ -0.78
HNRNPU-222ENST00000639880 RIC3Q7Z5B4 369 aa10.17□□□□□ -0.78
HNRNPU-222ENST00000639880 TNPO1Q92973 898 aaKnown RBP10.17□□□□□ -0.78
HNRNPU-222ENST00000639880 CIZ1Q9ULV3 898 aaPredicted RBP10.17□□□□□ -0.78
HNRNPU-222ENST00000639880 ANKRD36BQ8N2N9 1353 aa10.17□□□□□ -0.78
HNRNPU-222ENST00000639880 SF3A1Q15459 793 aaKnown RBP10.17□□□□□ -0.78
HNRNPU-222ENST00000639880 EIF2AK4Q9P2K8 1649 aaKnown RBP10.17□□□□□ -0.78
HNRNPU-222ENST00000639880 VSIG10Q8N0Z9 540 aa10.17□□□□□ -0.78
HNRNPU-222ENST00000639880 UPF3BQ9BZI7 483 aaKnown RBP10.17□□□□□ -0.78
HNRNPU-222ENST00000639880 NSD2O96028 1365 aa10.17□□□□□ -0.78
HNRNPU-222ENST00000639880 SSFA2P28290 1259 aa10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 HDAC1Q13547 482 aaPredicted RBP10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 CNTROBQ8N137 903 aa10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 ZRANB1Q9UGI0 708 aa10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 DENND4BO75064 1496 aaPredicted RBP10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 FOSBP53539 338 aa10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 ESCO1Q5FWF5 840 aa10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 NLRP2Q9NX02 1062 aa10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 R3HCC1Q9Y3T6 440 aaKnown RBP10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 SRGAP3O43295 1099 aa10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 FIBPO43427 364 aa10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 BMP2KLQ5H9B9 411 aa10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 ZMYM4Q5VZL5 1548 aa10.16□□□□□ -0.78
HNRNPU-222ENST00000639880 TSPYL6Q8N831 410 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 SRCIN1Q9C0H9 1055 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 KDM5CP41229 1560 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 CEP170Q5SW79 1584 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 RNF20Q5VTR2 975 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 BICD2Q8TD16 824 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 PHACTR3Q96KR7 559 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 MBD5Q9P267 1494 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 BLMP54132 1417 aaPredicted RBP10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 ESPNB1AK53 854 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 NUCB1Q02818 461 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 RAPGEF4Q8WZA2 1011 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 RBM42Q9BTD8 480 aaKnown RBP10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 TOMM22Q9NS69 142 aa10.15□□□□□ -0.78
HNRNPU-222ENST00000639880 MCM2P49736 904 aa10.15□□□□□ -0.79
HNRNPU-222ENST00000639880 TSHZ3Q63HK5 1081 aa10.15□□□□□ -0.79
HNRNPU-222ENST00000639880 NUTM1Q86Y26 1132 aa10.15□□□□□ -0.79
HNRNPU-222ENST00000639880 C8orf58Q8NAV2 365 aa10.15□□□□□ -0.79
HNRNPU-222ENST00000639880 CWC22Q9HCG8 908 aaKnown RBP10.15□□□□□ -0.79
HNRNPU-222ENST00000639880 MBD3O95983 291 aa10.14□□□□□ -0.79
HNRNPU-222ENST00000639880 NEUROD6Q96NK8 337 aa10.14□□□□□ -0.79
HNRNPU-222ENST00000639880 FSD1Q9BTV5 496 aa10.14□□□□□ -0.79
HNRNPU-222ENST00000639880 POLKQ9UBT6 870 aa10.14□□□□□ -0.79
HNRNPU-222ENST00000639880 IL16Q14005 1332 aa10.14□□□□□ -0.79
HNRNPU-222ENST00000639880 ASXL2Q76L83 1435 aa10.14□□□□□ -0.79
HNRNPU-222ENST00000639880 CFAP65Q6ZU64 1925 aaKnown RBP10.14□□□□□ -0.79
HNRNPU-222ENST00000639880 SIL1Q9H173 461 aa10.14□□□□□ -0.79
HNRNPU-222ENST00000639880 KIF3AQ9Y496 699 aa10.14□□□□□ -0.79
HNRNPU-222ENST00000639880 ABCC10Q5T3U5 1492 aa10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 MAGI2Q86UL8 1455 aa10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 BECN2A8MW95 431 aa10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 GOLGA6L19H0YKK7 550 aa10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 CCDC173Q0VFZ6 552 aa10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 ZNF530Q6P9A1 599 aaPredicted RBP10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 CWC27Q6UX04 472 aaKnown RBP10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 AEBP1Q8IUX7 1158 aa10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 USHBP1Q8N6Y0 703 aa10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 KRT24Q2M2I5 525 aa10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 HSP90AB2PQ58FF8 381 aa10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 FBXW7Q969H0 707 aa10.13□□□□□ -0.79
HNRNPU-222ENST00000639880 XPCQ01831 940 aaPredicted RBP10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 C16orf71Q8IYS4 520 aaPredicted RBP10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 ZBTB40Q9NUA8 1239 aa10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 A0A1W2PP64 1363 aa10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 RBM33Q96EV2 1170 aaKnown RBP10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 ISY1Q9ULR0 285 aaKnown RBP10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 ADGBQ8N7X0 1667 aa10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 GNAT3A8MTJ3 354 aa10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 MX1P20591 662 aa10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 MEIS3Q99687 375 aa10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 PANK2Q9BZ23 570 aa10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 NPC1L1Q9UHC9 1359 aa10.12□□□□□ -0.79
HNRNPU-222ENST00000639880 VAMP4O75379 141 aa10.11□□□□□ -0.79
HNRNPU-222ENST00000639880 CEBPAP49715 358 aaPredicted RBP10.11□□□□□ -0.79
HNRNPU-222ENST00000639880 PLEKHO1Q53GL0 409 aaPredicted RBP10.11□□□□□ -0.79
HNRNPU-222ENST00000639880 SYCE3A1L190 88 aa10.11□□□□□ -0.79
HNRNPU-222ENST00000639880 SMC5Q8IY18 1101 aa10.11□□□□□ -0.79
HNRNPU-222ENST00000639880 WDR7Q9Y4E6 1490 aa10.11□□□□□ -0.79
HNRNPU-222ENST00000639880 MRPL50Q8N5N7 158 aaKnown RBP10.11□□□□□ -0.79
HNRNPU-222ENST00000639880 DDX54Q8TDD1 881 aaKnown RBP10.11□□□□□ -0.79
HNRNPU-222ENST00000639880 ZNF592Q92610 1267 aa10.11□□□□□ -0.79
HNRNPU-222ENST00000639880 BCL11BQ9C0K0 894 aaPredicted RBP10.11□□□□□ -0.79
HNRNPU-222ENST00000639880 TULP1O00294 542 aaPredicted RBP10.1□□□□□ -0.79
HNRNPU-222ENST00000639880 DNAJC2Q99543 621 aaKnown RBP10.1□□□□□ -0.79
HNRNPU-222ENST00000639880 TSPY26PQ9H489 355 aa10.1□□□□□ -0.79
HNRNPU-222ENST00000639880 LRRFIP2Q9Y608 721 aaKnown RBP10.1□□□□□ -0.79
HNRNPU-222ENST00000639880 MAST1Q9Y2H9 1570 aa10.1□□□□□ -0.79
HNRNPU-222ENST00000639880 XRCC6P12956 609 aaKnown RBP eCLIP10.1□□□□□ -0.79
HNRNPU-222ENST00000639880 MYL6BP14649 208 aa10.1□□□□□ -0.79
HNRNPU-222ENST00000639880 THEMISQ8N1K5 641 aaPredicted RBP10.1□□□□□ -0.79
HNRNPU-222ENST00000639880 LARP6Q9BRS8 491 aaKnown RBP10.1□□□□□ -0.79
HNRNPU-222ENST00000639880 STK3Q13188 491 aa10.1□□□□□ -0.79
HNRNPU-222ENST00000639880 APPP05067 770 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms