RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 RNF214Q8ND24 703 aa6.88□□□□□ -1.31
SCARB2-218ENST00000639715 EID1Q9Y6B2 187 aa6.88□□□□□ -1.31
SCARB2-218ENST00000639715 FAM177BA6PVY3 158 aa6.88□□□□□ -1.31
SCARB2-218ENST00000639715 ST18O60284 1047 aa6.88□□□□□ -1.31
SCARB2-218ENST00000639715 ASXL1Q8IXJ9 1541 aa6.88□□□□□ -1.31
SCARB2-218ENST00000639715 SAMD1Q6SPF0 538 aaPredicted RBP6.87□□□□□ -1.31
SCARB2-218ENST00000639715 TSC1Q92574 1164 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 SOX12O15370 315 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 MYCNP04198 464 aaPredicted RBP6.87□□□□□ -1.31
SCARB2-218ENST00000639715 EXOSC9Q06265 439 aaKnown RBP6.87□□□□□ -1.31
SCARB2-218ENST00000639715 FAM69CQ0P6D2 419 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 MVPQ14764 893 aaKnown RBP6.87□□□□□ -1.31
SCARB2-218ENST00000639715 YEATS2Q9ULM3 1422 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 NSD2O96028 1365 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 CAVIN1Q6NZI2 390 aaKnown RBP6.87□□□□□ -1.31
SCARB2-218ENST00000639715 CHMP4CQ96CF2 233 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 TBC1D2Q9BYX2 928 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 TOMM22Q9NS69 142 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 ARHGEF5Q12774 1597 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 NPC1L1Q9UHC9 1359 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 IRX5P78411 483 aaPredicted RBP6.87□□□□□ -1.31
SCARB2-218ENST00000639715 C20orf194Q5TEA3 1177 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 RTEL1-TNFRSF6BF6WH68 1400 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 ASXL2Q76L83 1435 aa6.87□□□□□ -1.31
SCARB2-218ENST00000639715 ADGRF5Q8IZF2 1346 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 APBB1O00213 710 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 ELL2O00472 640 aaPredicted RBP6.86□□□□□ -1.31
SCARB2-218ENST00000639715 CALRP27797 417 aaKnown RBP6.86□□□□□ -1.31
SCARB2-218ENST00000639715 TEX35Q5T0J7 233 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 PIK3C2GO75747 1445 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 ABCC11Q96J66 1382 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 MCM5P33992 734 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 ATF7IPQ6VMQ6 1270 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 PRIMPOLQ96LW4 560 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 DEF6Q9H4E7 631 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 C14orf93Q9H972 538 aaKnown RBP6.86□□□□□ -1.31
SCARB2-218ENST00000639715 ZKSCAN5Q9Y2L8 839 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 REC8O95072 547 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 RBM25P49756 843 aaKnown RBP6.86□□□□□ -1.31
SCARB2-218ENST00000639715 RARSP54136 660 aaKnown RBP6.86□□□□□ -1.31
SCARB2-218ENST00000639715 C8orf34Q49A92 452 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 SYAP1Q96A49 352 aaPredicted RBP6.86□□□□□ -1.31
SCARB2-218ENST00000639715 GCC1Q96CN9 775 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 PUS7Q96PZ0 661 aaKnown RBP6.86□□□□□ -1.31
SCARB2-218ENST00000639715 TMX1Q9H3N1 280 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 CCDC9Q9Y3X0 531 aaKnown RBP6.86□□□□□ -1.31
SCARB2-218ENST00000639715 DMRT2Q9Y5R5 561 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 FANCAO15360 1455 aa6.86□□□□□ -1.31
SCARB2-218ENST00000639715 FCHSD2O94868 740 aa6.85□□□□□ -1.31
SCARB2-218ENST00000639715 AMPHP49418 695 aa6.85□□□□□ -1.31
SCARB2-218ENST00000639715 NGDNQ8NEJ9 315 aaKnown RBP6.85□□□□□ -1.31
SCARB2-218ENST00000639715 NOM1Q5C9Z4 860 aaKnown RBP6.85□□□□□ -1.31
SCARB2-218ENST00000639715 PRAM1Q96QH2 718 aa6.85□□□□□ -1.31
SCARB2-218ENST00000639715 LRP5O75197 1615 aa6.85□□□□□ -1.31
SCARB2-218ENST00000639715 U2AF2P26368 475 aaKnown RBP eCLIP6.85□□□□□ -1.31
SCARB2-218ENST00000639715 LNPKQ9C0E8 428 aa6.85□□□□□ -1.31
SCARB2-218ENST00000639715 A2MP01023 1474 aa6.85□□□□□ -1.31
SCARB2-218ENST00000639715 NOL7Q9UMY1 257 aaKnown RBP6.85□□□□□ -1.31
SCARB2-218ENST00000639715 GPS2Q13227 327 aa6.84□□□□□ -1.31
SCARB2-218ENST00000639715 HS1BP3Q53T59 392 aa6.84□□□□□ -1.31
SCARB2-218ENST00000639715 SLC4A10Q6U841 1118 aa6.84□□□□□ -1.31
SCARB2-218ENST00000639715 DRC7Q8IY82 874 aa6.84□□□□□ -1.31
SCARB2-218ENST00000639715 POLR3AO14802 1390 aaPredicted RBP6.84□□□□□ -1.31
SCARB2-218ENST00000639715 PRKAR2BP31323 418 aa6.84□□□□□ -1.31
SCARB2-218ENST00000639715 TMPOP42166 694 aaKnown RBP6.84□□□□□ -1.31
SCARB2-218ENST00000639715 HTATSF1O43719 755 aaKnown RBP6.84□□□□□ -1.31
SCARB2-218ENST00000639715 MCTP1Q6DN14 999 aa6.84□□□□□ -1.31
SCARB2-218ENST00000639715 CPS1P31327 1500 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 MYRIPQ8NFW9 859 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 ZNF592Q92610 1267 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 ZNF692Q9BU19 519 aaPredicted RBP6.83□□□□□ -1.32
SCARB2-218ENST00000639715 CDK19Q9BWU1 502 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 NOB1Q9ULX3 412 aaKnown RBP6.83□□□□□ -1.32
SCARB2-218ENST00000639715 SYNMO15061 1565 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 CD109Q6YHK3 1445 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 CDC45O75419 566 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 NUCB2P80303 420 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 INTS3Q68E01 1043 aaKnown RBP6.83□□□□□ -1.32
SCARB2-218ENST00000639715 TSR2Q969E8 191 aaKnown RBP6.83□□□□□ -1.32
SCARB2-218ENST00000639715 FEZ1Q99689 392 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 OGFRQ9NZT2 677 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 CWC15Q9P013 229 aaKnown RBP6.83□□□□□ -1.32
SCARB2-218ENST00000639715 RSPH14Q9UHP6 348 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 WDR7Q9Y4E6 1490 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 NOS1P29475 1434 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 TRAPPC8Q9Y2L5 1435 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 GTF2F1P35269 517 aaKnown RBP eCLIP6.83□□□□□ -1.32
SCARB2-218ENST00000639715 CCDC27Q2M243 656 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 KDM5CP41229 1560 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 PLA2R1Q13018 1463 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 MBD5Q9P267 1494 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 LOC102724159A0A0B4J2E5 919 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 HMOX1P09601 288 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 TDO2P48775 406 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 GABPB1Q06547 395 aaPredicted RBP6.83□□□□□ -1.32
SCARB2-218ENST00000639715 PWP2Q15269 919 aaKnown RBP6.83□□□□□ -1.32
SCARB2-218ENST00000639715 GPATCH3Q96I76 525 aa6.83□□□□□ -1.32
SCARB2-218ENST00000639715 ABCA8O94911 1581 aa6.82□□□□□ -1.32
SCARB2-218ENST00000639715 ALDH1L2Q3SY69 923 aa6.82□□□□□ -1.32
SCARB2-218ENST00000639715 GAS2L3Q86XJ1 694 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms