RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.42□□□□□ -0.74
HNRNPU-219ENST00000639628 ARHGAP45Q92619 1136 aa10.42□□□□□ -0.74
HNRNPU-219ENST00000639628 NUTM2GQ5VZR2 741 aa10.42□□□□□ -0.74
HNRNPU-219ENST00000639628 CLASRPQ8N2M8 674 aaKnown RBP10.42□□□□□ -0.74
HNRNPU-219ENST00000639628 SRCIN1Q9C0H9 1055 aa10.42□□□□□ -0.74
HNRNPU-219ENST00000639628 GRPEL1Q9HAV7 217 aa10.42□□□□□ -0.74
HNRNPU-219ENST00000639628 TAF7LQ5H9L4 462 aa10.42□□□□□ -0.74
HNRNPU-219ENST00000639628 CAVIN1Q6NZI2 390 aaKnown RBP10.42□□□□□ -0.74
HNRNPU-219ENST00000639628 ZNF330Q9Y3S2 320 aaPredicted RBP10.42□□□□□ -0.74
HNRNPU-219ENST00000639628 MYO5CQ9NQX4 1742 aa10.42□□□□□ -0.74
HNRNPU-219ENST00000639628 HDGFL1Q5TGJ6 251 aa10.41□□□□□ -0.74
HNRNPU-219ENST00000639628 TTC5Q8N0Z6 440 aa10.41□□□□□ -0.74
HNRNPU-219ENST00000639628 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.41□□□□□ -0.74
HNRNPU-219ENST00000639628 H3BQV1 296 aa10.41□□□□□ -0.74
HNRNPU-219ENST00000639628 CCDC173Q0VFZ6 552 aa10.41□□□□□ -0.74
HNRNPU-219ENST00000639628 IFFO2Q5TF58 517 aa10.41□□□□□ -0.74
HNRNPU-219ENST00000639628 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.41□□□□□ -0.74
HNRNPU-219ENST00000639628 ADCY10Q96PN6 1610 aa10.41□□□□□ -0.74
HNRNPU-219ENST00000639628 FAM184AQ8NB25 1140 aa10.41□□□□□ -0.74
HNRNPU-219ENST00000639628 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.74
HNRNPU-219ENST00000639628 RLBP1P12271 317 aa10.4□□□□□ -0.74
HNRNPU-219ENST00000639628 THEMISQ8N1K5 641 aaPredicted RBP10.4□□□□□ -0.74
HNRNPU-219ENST00000639628 PREX2Q70Z35 1606 aa10.4□□□□□ -0.74
HNRNPU-219ENST00000639628 TPM4P67936 248 aa10.4□□□□□ -0.75
HNRNPU-219ENST00000639628 NUCB1Q02818 461 aa10.4□□□□□ -0.75
HNRNPU-219ENST00000639628 DCTN1Q14203 1278 aa10.4□□□□□ -0.75
HNRNPU-219ENST00000639628 NCBP3Q53F19 620 aaKnown RBP10.39□□□□□ -0.75
HNRNPU-219ENST00000639628 PLEKHO1Q53GL0 409 aaPredicted RBP10.39□□□□□ -0.75
HNRNPU-219ENST00000639628 LRRFIP1Q32MZ4 808 aaKnown RBP10.39□□□□□ -0.75
HNRNPU-219ENST00000639628 MCM10Q7L590 875 aa10.39□□□□□ -0.75
HNRNPU-219ENST00000639628 MBIPQ9NS73 344 aa10.39□□□□□ -0.75
HNRNPU-219ENST00000639628 VPS37CA5D8V6 355 aaPredicted RBP10.39□□□□□ -0.75
HNRNPU-219ENST00000639628 MAGI2Q86UL8 1455 aa10.39□□□□□ -0.75
HNRNPU-219ENST00000639628 PTPRCP08575 1304 aa10.38□□□□□ -0.75
HNRNPU-219ENST00000639628 RAPGEF4Q8WZA2 1011 aa10.38□□□□□ -0.75
HNRNPU-219ENST00000639628 SLC26A8Q96RN1 970 aa10.38□□□□□ -0.75
HNRNPU-219ENST00000639628 SBNO2Q9Y2G9 1366 aa10.38□□□□□ -0.75
HNRNPU-219ENST00000639628 ERC1Q8IUD2 1116 aa10.38□□□□□ -0.75
HNRNPU-219ENST00000639628 KDM5AP29375 1690 aaKnown RBP10.38□□□□□ -0.75
HNRNPU-219ENST00000639628 PRDM15P57071 1507 aaPredicted RBP10.38□□□□□ -0.75
HNRNPU-219ENST00000639628 PTPRTO14522 1441 aa10.38□□□□□ -0.75
HNRNPU-219ENST00000639628 ATP10AO60312 1499 aa10.38□□□□□ -0.75
HNRNPU-219ENST00000639628 A0A1W2PP64 1363 aa10.38□□□□□ -0.75
HNRNPU-219ENST00000639628 RIC3Q7Z5B4 369 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 ZFYVE9O95405 1425 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 PSMA5P28066 241 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 TNNQ9UQP3 1299 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 CDC42BPAQ5VT25 1732 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 HIP1O00291 1037 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 TBC1D9Q6ZT07 1266 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 CCDC39Q9UFE4 941 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 SYNMO15061 1565 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 GNAT3A8MTJ3 354 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 TTC21BQ7Z4L5 1316 aa10.37□□□□□ -0.75
HNRNPU-219ENST00000639628 SMC5Q8IY18 1101 aa10.36□□□□□ -0.75
HNRNPU-219ENST00000639628 BCORL1Q5H9F3 1711 aa10.36□□□□□ -0.75
HNRNPU-219ENST00000639628 GOLGA6L19H0YKK7 550 aa10.36□□□□□ -0.75
HNRNPU-219ENST00000639628 LETM1O95202 739 aaPredicted RBP10.36□□□□□ -0.75
HNRNPU-219ENST00000639628 TRPM2O94759 1503 aa10.36□□□□□ -0.75
HNRNPU-219ENST00000639628 WDR33Q9C0J8 1336 aaKnown RBP10.36□□□□□ -0.75
HNRNPU-219ENST00000639628 LRRIQ1Q96JM4 1722 aa10.36□□□□□ -0.75
HNRNPU-219ENST00000639628 TNPO1Q92973 898 aaKnown RBP10.36□□□□□ -0.75
HNRNPU-219ENST00000639628 EXOC6BQ9Y2D4 811 aa10.36□□□□□ -0.75
HNRNPU-219ENST00000639628 DMRT2Q9Y5R5 561 aa10.36□□□□□ -0.75
HNRNPU-219ENST00000639628 PLA2R1Q13018 1463 aa10.35□□□□□ -0.75
HNRNPU-219ENST00000639628 AIMP1Q12904 312 aaKnown RBP10.35□□□□□ -0.75
HNRNPU-219ENST00000639628 CCDC34Q96HJ3 373 aa10.35□□□□□ -0.75
HNRNPU-219ENST00000639628 POLKQ9UBT6 870 aa10.35□□□□□ -0.75
HNRNPU-219ENST00000639628 TTC37Q6PGP7 1564 aa10.35□□□□□ -0.75
HNRNPU-219ENST00000639628 ZBTB40Q9NUA8 1239 aa10.35□□□□□ -0.75
HNRNPU-219ENST00000639628 MRPL50Q8N5N7 158 aaKnown RBP10.35□□□□□ -0.75
HNRNPU-219ENST00000639628 RNF214Q8ND24 703 aa10.35□□□□□ -0.75
HNRNPU-219ENST00000639628 TSPY26PQ9H489 355 aa10.35□□□□□ -0.75
HNRNPU-219ENST00000639628 BECN2A8MW95 431 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 MX1P20591 662 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 PDCP20941 246 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 FSD1Q9BTV5 496 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 MIS18AQ9NYP9 233 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 CCDC9Q9Y3X0 531 aaKnown RBP10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 ZNF521Q96K83 1311 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 ESPNB1AK53 854 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 SRGAP3O43295 1099 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 ZNF530Q6P9A1 599 aaPredicted RBP10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 TRMT2AQ8IZ69 625 aaKnown RBP10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 BICD2Q8TD16 824 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 POGZQ7Z3K3 1410 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 SMARCA5O60264 1052 aaPredicted RBP10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 ESCO1Q5FWF5 840 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 CROCC2H7BZ55 1655 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 UHRF1BP1LA0JNW5 1464 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 NPHP1O15259 732 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 SNX21Q969T3 373 aa10.34□□□□□ -0.75
HNRNPU-219ENST00000639628 FAM83GA6ND36 823 aa10.33□□□□□ -0.76
HNRNPU-219ENST00000639628 SEC24BO95487 1268 aa10.33□□□□□ -0.76
HNRNPU-219ENST00000639628 NLRP2Q9NX02 1062 aa10.33□□□□□ -0.76
HNRNPU-219ENST00000639628 ABCC1P33527 1531 aa10.33□□□□□ -0.76
HNRNPU-219ENST00000639628 TTC22Q5TAA0 569 aa10.33□□□□□ -0.76
HNRNPU-219ENST00000639628 YTHDC2Q9H6S0 1430 aaKnown RBP10.33□□□□□ -0.76
HNRNPU-219ENST00000639628 RAB11FIP3O75154 756 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms