RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 MCM2P49736 904 aa17.37■□□□□ 0.37
SCARB2-216ENST00000639300 ZNF592Q92610 1267 aa17.37■□□□□ 0.37
SCARB2-216ENST00000639300 TBC1D2Q9BYX2 928 aa17.37■□□□□ 0.37
SCARB2-216ENST00000639300 MPNDQ8N594 471 aa17.37■□□□□ 0.37
SCARB2-216ENST00000639300 CARD14Q9BXL6 1004 aa17.37■□□□□ 0.37
SCARB2-216ENST00000639300 FAM13BQ9NYF5 915 aa17.37■□□□□ 0.37
SCARB2-216ENST00000639300 TCOF1Q13428 1488 aaKnown RBP17.36■□□□□ 0.37
SCARB2-216ENST00000639300 PES1O00541 588 aaKnown RBP17.36■□□□□ 0.37
SCARB2-216ENST00000639300 ABCC11Q96J66 1382 aa17.36■□□□□ 0.37
SCARB2-216ENST00000639300 RALYLQ86SE5 291 aaKnown RBP17.36■□□□□ 0.37
SCARB2-216ENST00000639300 UPF3BQ9BZI7 483 aaKnown RBP17.36■□□□□ 0.37
SCARB2-216ENST00000639300 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
SCARB2-216ENST00000639300 KDM4AO75164 1064 aa17.35■□□□□ 0.37
SCARB2-216ENST00000639300 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-216ENST00000639300 NFXL1Q6ZNB6 911 aa17.35■□□□□ 0.37
SCARB2-216ENST00000639300 NUTM1Q86Y26 1132 aa17.35■□□□□ 0.37
SCARB2-216ENST00000639300 GNAT3A8MTJ3 354 aa17.35■□□□□ 0.37
SCARB2-216ENST00000639300 TRIM29Q14134 588 aa17.35■□□□□ 0.37
SCARB2-216ENST00000639300 TRAPPC8Q9Y2L5 1435 aa17.35■□□□□ 0.37
SCARB2-216ENST00000639300 PSMA5P28066 241 aa17.35■□□□□ 0.37
SCARB2-216ENST00000639300 SASS6Q6UVJ0 657 aa17.35■□□□□ 0.37
SCARB2-216ENST00000639300 MBD3O95983 291 aa17.34■□□□□ 0.37
SCARB2-216ENST00000639300 CWC27Q6UX04 472 aaKnown RBP17.34■□□□□ 0.37
SCARB2-216ENST00000639300 BTBD11A6QL63 1104 aa17.34■□□□□ 0.37
SCARB2-216ENST00000639300 PLCH2O75038 1416 aa17.34■□□□□ 0.37
SCARB2-216ENST00000639300 CLSTN1O94985 981 aa17.34■□□□□ 0.37
SCARB2-216ENST00000639300 FAM135AQ9P2D6 1515 aa17.34■□□□□ 0.37
SCARB2-216ENST00000639300 ANKLE2Q86XL3 938 aa17.34■□□□□ 0.37
SCARB2-216ENST00000639300 DDX54Q8TDD1 881 aaKnown RBP17.34■□□□□ 0.37
SCARB2-216ENST00000639300 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.37
SCARB2-216ENST00000639300 G3V3G9 751 aa17.33■□□□□ 0.37
SCARB2-216ENST00000639300 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.37
SCARB2-216ENST00000639300 VPS37DQ86XT2 251 aa17.33■□□□□ 0.37
SCARB2-216ENST00000639300 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.37
SCARB2-216ENST00000639300 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.37
SCARB2-216ENST00000639300 CCDC73Q6ZRK6 1079 aa17.33■□□□□ 0.37
SCARB2-216ENST00000639300 AMOTL2Q9Y2J4 779 aa17.33■□□□□ 0.37
SCARB2-216ENST00000639300 KDM5BQ9UGL1 1544 aa17.33■□□□□ 0.36
SCARB2-216ENST00000639300 STK3Q13188 491 aa17.32■□□□□ 0.36
SCARB2-216ENST00000639300 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
SCARB2-216ENST00000639300 AACSQ86V21 672 aa17.32■□□□□ 0.36
SCARB2-216ENST00000639300 TMX4Q9H1E5 349 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-216ENST00000639300 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
SCARB2-216ENST00000639300 CEBPZQ03701 1054 aaKnown RBP17.31■□□□□ 0.36
SCARB2-216ENST00000639300 ERC1Q8IUD2 1116 aa17.31■□□□□ 0.36
SCARB2-216ENST00000639300 SDF4Q9BRK5 362 aa17.31■□□□□ 0.36
SCARB2-216ENST00000639300 CWC22Q9HCG8 908 aaKnown RBP17.31■□□□□ 0.36
SCARB2-216ENST00000639300 FOXO3O43524 673 aa17.31■□□□□ 0.36
SCARB2-216ENST00000639300 TPD52L1Q16890 204 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-216ENST00000639300 GRPEL1Q9HAV7 217 aa17.31■□□□□ 0.36
SCARB2-216ENST00000639300 RLBP1P12271 317 aa17.31■□□□□ 0.36
SCARB2-216ENST00000639300 PZPP20742 1482 aa17.31■□□□□ 0.36
SCARB2-216ENST00000639300 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-216ENST00000639300 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
SCARB2-216ENST00000639300 R3HCC1Q9Y3T6 440 aaKnown RBP17.3■□□□□ 0.36
SCARB2-216ENST00000639300 MARCH6O60337 910 aa17.3■□□□□ 0.36
SCARB2-216ENST00000639300 CIZ1Q9ULV3 898 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-216ENST00000639300 CABP4P57796 275 aa17.3■□□□□ 0.36
SCARB2-216ENST00000639300 WDR62O43379 1518 aa17.29■□□□□ 0.36
SCARB2-216ENST00000639300 CCAR2Q8N163 923 aaKnown RBP17.29■□□□□ 0.36
SCARB2-216ENST00000639300 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-216ENST00000639300 HSP90AB2PQ58FF8 381 aa17.29■□□□□ 0.36
SCARB2-216ENST00000639300 TOM1L2Q6ZVM7 507 aa17.29■□□□□ 0.36
SCARB2-216ENST00000639300 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
SCARB2-216ENST00000639300 PDCP20941 246 aa17.28■□□□□ 0.36
SCARB2-216ENST00000639300 MX1P20591 662 aa17.28■□□□□ 0.36
SCARB2-216ENST00000639300 CTTNBP2Q8WZ74 1663 aa17.28■□□□□ 0.36
SCARB2-216ENST00000639300 ATP2B1P20020 1258 aa17.28■□□□□ 0.36
SCARB2-216ENST00000639300 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
SCARB2-216ENST00000639300 JAKMIP1Q96N16 626 aaKnown RBP17.27■□□□□ 0.36
SCARB2-216ENST00000639300 CFAP43Q8NDM7 1665 aa17.27■□□□□ 0.36
SCARB2-216ENST00000639300 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.35
SCARB2-216ENST00000639300 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.35
SCARB2-216ENST00000639300 DENND4BO75064 1496 aaPredicted RBP17.27■□□□□ 0.35
SCARB2-216ENST00000639300 HIP1O00291 1037 aa17.26■□□□□ 0.35
SCARB2-216ENST00000639300 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
SCARB2-216ENST00000639300 PRDM11Q9NQV5 511 aa17.26■□□□□ 0.35
SCARB2-216ENST00000639300 LRRFIP2Q9Y608 721 aaKnown RBP17.26■□□□□ 0.35
SCARB2-216ENST00000639300 TBC1D9Q6ZT07 1266 aa17.26■□□□□ 0.35
SCARB2-216ENST00000639300 ASXL1Q8IXJ9 1541 aa17.26■□□□□ 0.35
SCARB2-216ENST00000639300 VSIG10Q8N0Z9 540 aa17.26■□□□□ 0.35
SCARB2-216ENST00000639300 FMNL2Q96PY5 1086 aa17.26■□□□□ 0.35
SCARB2-216ENST00000639300 WDR33Q9C0J8 1336 aaKnown RBP17.25■□□□□ 0.35
SCARB2-216ENST00000639300 LARP1BQ659C4 914 aaKnown RBP17.25■□□□□ 0.35
SCARB2-216ENST00000639300 TBC1D32Q96NH3 1257 aa17.25■□□□□ 0.35
SCARB2-216ENST00000639300 TSPY26PQ9H489 355 aa17.25■□□□□ 0.35
SCARB2-216ENST00000639300 ACEP12821 1306 aa17.25■□□□□ 0.35
SCARB2-216ENST00000639300 FLIIQ13045 1269 aa17.25■□□□□ 0.35
SCARB2-216ENST00000639300 NSD2O96028 1365 aa17.25■□□□□ 0.35
SCARB2-216ENST00000639300 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
SCARB2-216ENST00000639300 RAD21O60216 631 aa17.25■□□□□ 0.35
SCARB2-216ENST00000639300 BLOC1S2Q6QNY1 142 aa17.25■□□□□ 0.35
SCARB2-216ENST00000639300 AEBP1Q8IUX7 1158 aa17.25■□□□□ 0.35
SCARB2-216ENST00000639300 TRIM5Q9C035 493 aa17.25■□□□□ 0.35
SCARB2-216ENST00000639300 ERICH2A1L162 156 aa17.24■□□□□ 0.35
SCARB2-216ENST00000639300 TPM3P06753 285 aa17.24■□□□□ 0.35
SCARB2-216ENST00000639300 KIF1BPQ96EK5 621 aa17.24■□□□□ 0.35
SCARB2-216ENST00000639300 ANXA1P04083 346 aa17.24■□□□□ 0.35
SCARB2-216ENST00000639300 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
SCARB2-216ENST00000639300 SPG7Q9UQ90 795 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms