RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PPFIBP1Q86W92 1011 aa21.92■■□□□ 1.1
SCARB2-213ENST00000638680 TXLNAP40222 546 aa21.92■■□□□ 1.1
SCARB2-213ENST00000638680 PDRG1Q9NUG6 133 aa21.92■■□□□ 1.1
SCARB2-213ENST00000638680 PIP4K2AP48426 406 aaPredicted RBP21.92■■□□□ 1.1
SCARB2-213ENST00000638680 SLFN5Q08AF3 891 aa21.92■■□□□ 1.1
SCARB2-213ENST00000638680 SIL1Q9H173 461 aa21.92■■□□□ 1.1
SCARB2-213ENST00000638680 HFM1A2PYH4 1435 aa21.91■■□□□ 1.1
SCARB2-213ENST00000638680 TTC39AQ5SRH9 613 aa21.91■■□□□ 1.1
SCARB2-213ENST00000638680 HDGFL1Q5TGJ6 251 aa21.91■■□□□ 1.1
SCARB2-213ENST00000638680 SKAP1Q86WV1 359 aa21.91■■□□□ 1.1
SCARB2-213ENST00000638680 NUP62CLQ9H1M0 184 aa21.91■■□□□ 1.1
SCARB2-213ENST00000638680 PRAM1Q96QH2 718 aa21.91■■□□□ 1.1
SCARB2-213ENST00000638680 SULT6B1Q6IMI4 303 aa21.91■■□□□ 1.1
SCARB2-213ENST00000638680 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
SCARB2-213ENST00000638680 CDK5RAP3Q96JB5 506 aa21.9■■□□□ 1.1
SCARB2-213ENST00000638680 SRCIN1Q9C0H9 1055 aa21.9■■□□□ 1.1
SCARB2-213ENST00000638680 ZNHIT6Q9NWK9 470 aaKnown RBP21.9■■□□□ 1.1
SCARB2-213ENST00000638680 JAKMIP1Q96N16 626 aaKnown RBP21.89■■□□□ 1.09
SCARB2-213ENST00000638680 DACH1Q9UI36 760 aa21.89■■□□□ 1.09
SCARB2-213ENST00000638680 STK11IPQ8N1F8 1099 aa21.89■■□□□ 1.09
SCARB2-213ENST00000638680 ZNF428Q96B54 188 aa21.89■■□□□ 1.09
SCARB2-213ENST00000638680 PLEKHO1Q53GL0 409 aaPredicted RBP21.88■■□□□ 1.09
SCARB2-213ENST00000638680 CCDC158Q5M9N0 1113 aa21.88■■□□□ 1.09
SCARB2-213ENST00000638680 CBFA2T2O43439 604 aa21.88■■□□□ 1.09
SCARB2-213ENST00000638680 CWC27Q6UX04 472 aaKnown RBP21.88■■□□□ 1.09
SCARB2-213ENST00000638680 TMEM57Q8N5G2 664 aa21.88■■□□□ 1.09
SCARB2-213ENST00000638680 BLOC1S2Q6QNY1 142 aa21.87■■□□□ 1.09
SCARB2-213ENST00000638680 ABTB2Q8N961 1025 aa21.87■■□□□ 1.09
SCARB2-213ENST00000638680 ZSCAN31Q96LW9 406 aaPredicted RBP21.87■■□□□ 1.09
SCARB2-213ENST00000638680 FILIP1Q7Z7B0 1213 aa21.87■■□□□ 1.09
SCARB2-213ENST00000638680 ERLIN1O75477 346 aa21.86■■□□□ 1.09
SCARB2-213ENST00000638680 PDCL2Q8N4E4 241 aa21.86■■□□□ 1.09
SCARB2-213ENST00000638680 C20orf194Q5TEA3 1177 aa21.86■■□□□ 1.09
SCARB2-213ENST00000638680 CEP57L1Q8IYX8 460 aa21.86■■□□□ 1.09
SCARB2-213ENST00000638680 AFAP1Q8N556 730 aa21.86■■□□□ 1.09
SCARB2-213ENST00000638680 FAM177BA6PVY3 158 aa21.85■■□□□ 1.09
SCARB2-213ENST00000638680 AACSQ86V21 672 aa21.85■■□□□ 1.09
SCARB2-213ENST00000638680 CABP1Q9NZU7 370 aa21.85■■□□□ 1.09
SCARB2-213ENST00000638680 CDK19Q9BWU1 502 aa21.84■■□□□ 1.09
SCARB2-213ENST00000638680 IL1RAPL2Q9NP60 686 aa21.84■■□□□ 1.09
SCARB2-213ENST00000638680 CFAP45Q9UL16 551 aa21.84■■□□□ 1.09
SCARB2-213ENST00000638680 EIF3JO75822 258 aaKnown RBP21.84■■□□□ 1.09
SCARB2-213ENST00000638680 ERICH4A6NGS2 130 aa21.84■■□□□ 1.09
SCARB2-213ENST00000638680 UPF3BQ9BZI7 483 aaKnown RBP21.84■■□□□ 1.09
SCARB2-213ENST00000638680 CCDC181Q5TID7 509 aa21.84■■□□□ 1.09
SCARB2-213ENST00000638680 CCAR1Q8IX12 1150 aaKnown RBP21.84■■□□□ 1.09
SCARB2-213ENST00000638680 EHBP1L1Q8N3D4 1523 aa21.84■■□□□ 1.09
SCARB2-213ENST00000638680 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.84■■□□□ 1.09
SCARB2-213ENST00000638680 PPP6R1Q9UPN7 881 aa21.84■■□□□ 1.09
SCARB2-213ENST00000638680 CAMK4Q16566 473 aa21.83■■□□□ 1.09
SCARB2-213ENST00000638680 TRIM22Q8IYM9 498 aa21.83■■□□□ 1.09
SCARB2-213ENST00000638680 C9orf84Q5VXU9 1444 aa21.83■■□□□ 1.09
SCARB2-213ENST00000638680 GOLGA6L10A6NI86 522 aa21.83■■□□□ 1.09
SCARB2-213ENST00000638680 SRGAP3O43295 1099 aa21.83■■□□□ 1.08
SCARB2-213ENST00000638680 DEF6Q9H4E7 631 aa21.83■■□□□ 1.08
SCARB2-213ENST00000638680 CNNM1Q9NRU3 951 aa21.83■■□□□ 1.08
SCARB2-213ENST00000638680 KIAA0754O94854 1291 aa21.82■■□□□ 1.08
SCARB2-213ENST00000638680 MAP3K11Q16584 847 aa21.82■■□□□ 1.08
SCARB2-213ENST00000638680 KIF6Q6ZMV9 814 aa21.82■■□□□ 1.08
SCARB2-213ENST00000638680 SLC3A2P08195 630 aaKnown RBP21.82■■□□□ 1.08
SCARB2-213ENST00000638680 IKQ13123 557 aaPredicted RBP21.82■■□□□ 1.08
SCARB2-213ENST00000638680 CCDC69A6NI79 296 aa21.82■■□□□ 1.08
SCARB2-213ENST00000638680 KRT18P05783 430 aaKnown RBP21.82■■□□□ 1.08
SCARB2-213ENST00000638680 RPAP2Q8IXW5 612 aaPredicted RBP21.81■■□□□ 1.08
SCARB2-213ENST00000638680 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.81■■□□□ 1.08
SCARB2-213ENST00000638680 CASTP20810 708 aaKnown RBP21.81■■□□□ 1.08
SCARB2-213ENST00000638680 FAM193AP78312 1265 aa21.81■■□□□ 1.08
SCARB2-213ENST00000638680 AQRO60306 1485 aaKnown RBP eCLIP21.81■■□□□ 1.08
SCARB2-213ENST00000638680 ERLIN2O94905 339 aa21.8■■□□□ 1.08
SCARB2-213ENST00000638680 HSP90AB3PQ58FF7 597 aa21.8■■□□□ 1.08
SCARB2-213ENST00000638680 STIM1Q13586 685 aa21.8■■□□□ 1.08
SCARB2-213ENST00000638680 CYB5RLQ6IPT4 315 aa21.8■■□□□ 1.08
SCARB2-213ENST00000638680 NUTM1Q86Y26 1132 aa21.79■■□□□ 1.08
SCARB2-213ENST00000638680 NUP133Q8WUM0 1156 aa21.78■■□□□ 1.08
SCARB2-213ENST00000638680 ATF3P18847 181 aa21.78■■□□□ 1.08
SCARB2-213ENST00000638680 TXNDC2Q86VQ3 553 aa21.78■■□□□ 1.08
SCARB2-213ENST00000638680 PLCD4Q9BRC7 762 aa21.78■■□□□ 1.08
SCARB2-213ENST00000638680 PRDM10Q9NQV6 1147 aa21.78■■□□□ 1.08
SCARB2-213ENST00000638680 SMTNL1A8MU46 457 aa21.78■■□□□ 1.08
SCARB2-213ENST00000638680 SYCP1Q15431 976 aa21.78■■□□□ 1.08
SCARB2-213ENST00000638680 TANGO6Q9C0B7 1094 aa21.78■■□□□ 1.08
SCARB2-213ENST00000638680 XPCQ01831 940 aaPredicted RBP21.77■■□□□ 1.08
SCARB2-213ENST00000638680 TIAM1Q13009 1591 aa21.77■■□□□ 1.08
SCARB2-213ENST00000638680 TMPOP42166 694 aaKnown RBP21.77■■□□□ 1.08
SCARB2-213ENST00000638680 CBX1P83916 185 aa21.77■■□□□ 1.08
SCARB2-213ENST00000638680 CCDC102AQ96A19 550 aa21.77■■□□□ 1.08
SCARB2-213ENST00000638680 GPRASP1Q5JY77 1395 aa21.77■■□□□ 1.08
SCARB2-213ENST00000638680 DDX11Q96FC9 970 aa21.77■■□□□ 1.08
SCARB2-213ENST00000638680 TBC1D2Q9BYX2 928 aa21.77■■□□□ 1.08
SCARB2-213ENST00000638680 CENPHQ9H3R5 247 aa21.77■■□□□ 1.07
SCARB2-213ENST00000638680 SMARCA5O60264 1052 aaPredicted RBP21.76■■□□□ 1.07
SCARB2-213ENST00000638680 SSFA2P28290 1259 aa21.76■■□□□ 1.07
SCARB2-213ENST00000638680 CCDC83Q8IWF9 413 aa21.76■■□□□ 1.07
SCARB2-213ENST00000638680 UBXN4Q92575 508 aa21.76■■□□□ 1.07
SCARB2-213ENST00000638680 RBM42Q9BTD8 480 aaKnown RBP21.76■■□□□ 1.07
SCARB2-213ENST00000638680 LUC7LQ9NQ29 371 aaKnown RBP21.76■■□□□ 1.07
SCARB2-213ENST00000638680 EXOC6BQ9Y2D4 811 aa21.76■■□□□ 1.07
SCARB2-213ENST00000638680 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
SCARB2-213ENST00000638680 MYL6BP14649 208 aa21.76■■□□□ 1.07
SCARB2-213ENST00000638680 FERMT3Q86UX7 667 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms