RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 NINLQ9Y2I6 1382 aa6.42□□□□□ -1.38
TCF4-288ENST00000637923 ST5P78524 1137 aa6.42□□□□□ -1.38
TCF4-288ENST00000637923 VPS8Q8N3P4 1428 aa6.42□□□□□ -1.38
TCF4-288ENST00000637923 MKNK2Q9HBH9 465 aa6.42□□□□□ -1.38
TCF4-288ENST00000637923 GPR162Q16538 588 aa6.42□□□□□ -1.38
TCF4-288ENST00000637923 DDX49Q9Y6V7 483 aaKnown RBP6.42□□□□□ -1.38
TCF4-288ENST00000637923 OLFM4Q6UX06 510 aa6.42□□□□□ -1.38
TCF4-288ENST00000637923 PANK1Q8TE04 598 aa6.42□□□□□ -1.38
TCF4-288ENST00000637923 FMNL2Q96PY5 1086 aa6.42□□□□□ -1.38
TCF4-288ENST00000637923 MAGEC2Q9UBF1 373 aaPredicted RBP6.42□□□□□ -1.38
TCF4-288ENST00000637923 DDX19BQ9UMR2 479 aa6.42□□□□□ -1.38
TCF4-288ENST00000637923 TRMT112Q9UI30 125 aaKnown RBP6.41□□□□□ -1.38
TCF4-288ENST00000637923 ATP6V1DQ9Y5K8 247 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 GOLGA6L3A6NEY3 463 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 MYO1BO43795 1136 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 REC8O95072 547 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 CAGE1Q8TC20 777 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 VEZTQ9HBM0 779 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 LMTK3Q96Q04 1460 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 DHX8Q14562 1220 aaKnown RBP6.41□□□□□ -1.38
TCF4-288ENST00000637923 EAPPQ56P03 285 aaPredicted RBP6.41□□□□□ -1.38
TCF4-288ENST00000637923 SASS6Q6UVJ0 657 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 KRT28Q7Z3Y7 464 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 TXLNAP40222 546 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 NUTM1Q86Y26 1132 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 DHX37Q8IY37 1157 aaKnown RBP6.41□□□□□ -1.38
TCF4-288ENST00000637923 MYD88Q99836 296 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 PPP4R3AQ6IN85 833 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 FGD5Q6ZNL6 1462 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 NEFHP12036 1026 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 TNNT3P45378 269 aaPredicted RBP6.41□□□□□ -1.38
TCF4-288ENST00000637923 TSR2Q969E8 191 aaKnown RBP6.41□□□□□ -1.38
TCF4-288ENST00000637923 NESP48681 1621 aa6.41□□□□□ -1.38
TCF4-288ENST00000637923 EXOC6Q8TAG9 804 aa6.4□□□□□ -1.38
TCF4-288ENST00000637923 SLC12A5Q9H2X9 1139 aa6.4□□□□□ -1.38
TCF4-288ENST00000637923 AACSQ86V21 672 aa6.4□□□□□ -1.38
TCF4-288ENST00000637923 LMOD1P29536 600 aaPredicted RBP6.4□□□□□ -1.38
TCF4-288ENST00000637923 PRKG1Q13976 671 aa6.4□□□□□ -1.38
TCF4-288ENST00000637923 UBA5Q9GZZ9 404 aa6.4□□□□□ -1.38
TCF4-288ENST00000637923 VAT1LQ9HCJ6 419 aa6.4□□□□□ -1.38
TCF4-288ENST00000637923 RIMBP2O15034 1052 aa6.4□□□□□ -1.39
TCF4-288ENST00000637923 CCDC73Q6ZRK6 1079 aa6.4□□□□□ -1.39
TCF4-288ENST00000637923 JARID2Q92833 1246 aaPredicted RBP6.4□□□□□ -1.39
TCF4-288ENST00000637923 UBAC1Q9BSL1 405 aa6.4□□□□□ -1.39
TCF4-288ENST00000637923 ZMYND15Q9H091 742 aa6.4□□□□□ -1.39
TCF4-288ENST00000637923 INTS3Q68E01 1043 aaKnown RBP6.4□□□□□ -1.39
TCF4-288ENST00000637923 ATP6V1AP38606 617 aa6.4□□□□□ -1.39
TCF4-288ENST00000637923 TNIP1Q15025 636 aa6.4□□□□□ -1.39
TCF4-288ENST00000637923 TRIM21P19474 475 aaKnown RBP6.39□□□□□ -1.39
TCF4-288ENST00000637923 TWISTNBQ3B726 338 aaPredicted RBP6.39□□□□□ -1.39
TCF4-288ENST00000637923 FBXO31Q5XUX0 539 aaPredicted RBP6.39□□□□□ -1.39
TCF4-288ENST00000637923 CABLES1Q8TDN4 633 aa6.39□□□□□ -1.39
TCF4-288ENST00000637923 ZBTB3Q9H5J0 574 aa6.39□□□□□ -1.39
TCF4-288ENST00000637923 CCDC82Q8N4S0 544 aa6.39□□□□□ -1.39
TCF4-288ENST00000637923 AIDAQ96BJ3 306 aa6.39□□□□□ -1.39
TCF4-288ENST00000637923 SEC63Q9UGP8 760 aaKnown RBP6.39□□□□□ -1.39
TCF4-288ENST00000637923 BCAR3O75815 825 aa6.39□□□□□ -1.39
TCF4-288ENST00000637923 AMOTL2Q9Y2J4 779 aa6.39□□□□□ -1.39
TCF4-288ENST00000637923 NBPF6Q5VWK0 638 aa6.39□□□□□ -1.39
TCF4-288ENST00000637923 DDX46Q7L014 1031 aaKnown RBP6.39□□□□□ -1.39
TCF4-288ENST00000637923 NBPF5PQ86XG9 351 aaPredicted RBP6.39□□□□□ -1.39
TCF4-288ENST00000637923 NBPF4Q96M43 638 aa6.39□□□□□ -1.39
TCF4-288ENST00000637923 SDF4Q9BRK5 362 aa6.39□□□□□ -1.39
TCF4-288ENST00000637923 PARP3Q9Y6F1 533 aa6.39□□□□□ -1.39
TCF4-288ENST00000637923 PICALMQ13492 652 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 SAMM50Q9Y512 469 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 NCKAP5LQ9HCH0 1330 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 CCER2I3L3R5 266 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 CSPG5O95196 566 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 MYCP01106 439 aaPredicted RBP6.38□□□□□ -1.39
TCF4-288ENST00000637923 PSMA5P28066 241 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 RUFY1Q96T51 708 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 RDXP35241 583 aaKnown RBP6.38□□□□□ -1.39
TCF4-288ENST00000637923 ZNF354CQ86Y25 554 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 NUDT16Q96DE0 195 aaKnown RBP6.38□□□□□ -1.39
TCF4-288ENST00000637923 CEP126Q9P2H0 1117 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 CIZ1Q9ULV3 898 aaPredicted RBP6.38□□□□□ -1.39
TCF4-288ENST00000637923 PHLDB1Q86UU1 1377 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 ATAD2BQ9ULI0 1458 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 NOB1Q9ULX3 412 aaKnown RBP6.38□□□□□ -1.39
TCF4-288ENST00000637923 RANBP6O60518 1105 aaKnown RBP6.38□□□□□ -1.39
TCF4-288ENST00000637923 GNAI2P04899 355 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 NF2P35240 595 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 CCDC173Q0VFZ6 552 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 DCTN1Q14203 1278 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 MCM10Q7L590 875 aa6.38□□□□□ -1.39
TCF4-288ENST00000637923 ZNF444Q8N0Y2 327 aaPredicted RBP6.38□□□□□ -1.39
TCF4-288ENST00000637923 SMC2O95347 1197 aa6.37□□□□□ -1.39
TCF4-288ENST00000637923 CUL5Q93034 780 aa6.37□□□□□ -1.39
TCF4-288ENST00000637923 STAC3Q96MF2 364 aa6.37□□□□□ -1.39
TCF4-288ENST00000637923 SYNJ2O15056 1496 aa6.37□□□□□ -1.39
TCF4-288ENST00000637923 GNAT3A8MTJ3 354 aa6.37□□□□□ -1.39
TCF4-288ENST00000637923 EXOSC9Q06265 439 aaKnown RBP6.37□□□□□ -1.39
TCF4-288ENST00000637923 TRIM22Q8IYM9 498 aa6.37□□□□□ -1.39
TCF4-288ENST00000637923 ZNF692Q9BU19 519 aaPredicted RBP6.37□□□□□ -1.39
TCF4-288ENST00000637923 JAG2Q9Y219 1238 aa6.37□□□□□ -1.39
TCF4-288ENST00000637923 CCDC181Q5TID7 509 aa6.37□□□□□ -1.39
TCF4-288ENST00000637923 IL1RAPL2Q9NP60 686 aa6.37□□□□□ -1.39
TCF4-288ENST00000637923 MSH6P52701 1360 aa6.37□□□□□ -1.39
TCF4-288ENST00000637923 CKAP2LQ8IYA6 745 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms