RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 PNNQ9H307 717 aaKnown RBP27.85■■■□□ 2.05
CLN8-213ENST00000637156 ZC3H6P61129 1189 aaKnown RBP27.84■■■□□ 2.05
CLN8-213ENST00000637156 ZNF521Q96K83 1311 aa27.84■■■□□ 2.05
CLN8-213ENST00000637156 ZBTB7CA1YPR0 619 aa27.83■■■□□ 2.05
CLN8-213ENST00000637156 TOM1O60784 492 aa27.83■■■□□ 2.05
CLN8-213ENST00000637156 PRKAR2BP31323 418 aa27.83■■■□□ 2.05
CLN8-213ENST00000637156 NEUROD2Q15784 382 aa27.83■■■□□ 2.04
CLN8-213ENST00000637156 RRP7AQ9Y3A4 280 aaKnown RBP27.83■■■□□ 2.04
CLN8-213ENST00000637156 RTL1A6NKG5 1358 aa27.82■■■□□ 2.04
CLN8-213ENST00000637156 NGEFQ8N5V2 710 aa27.82■■■□□ 2.04
CLN8-213ENST00000637156 SULT6B1Q6IMI4 303 aa27.81■■■□□ 2.04
CLN8-213ENST00000637156 CDCA7LQ96GN5 454 aa27.81■■■□□ 2.04
CLN8-213ENST00000637156 EYA1Q99502 592 aa27.81■■■□□ 2.04
CLN8-213ENST00000637156 PDE3BQ13370 1112 aa27.81■■■□□ 2.04
CLN8-213ENST00000637156 AEBP1Q8IUX7 1158 aa27.81■■■□□ 2.04
CLN8-213ENST00000637156 PHACTR3Q96KR7 559 aa27.81■■■□□ 2.04
CLN8-213ENST00000637156 LTV1Q96GA3 475 aaPredicted RBP27.8■■■□□ 2.04
CLN8-213ENST00000637156 AXIN2Q9Y2T1 843 aa27.8■■■□□ 2.04
CLN8-213ENST00000637156 NHSL1Q5SYE7 1610 aa27.8■■■□□ 2.04
CLN8-213ENST00000637156 ROBO1Q9Y6N7 1651 aa27.79■■■□□ 2.04
CLN8-213ENST00000637156 WWC1Q8IX03 1113 aa27.78■■■□□ 2.04
CLN8-213ENST00000637156 MAPK8IP3Q9UPT6 1336 aa27.78■■■□□ 2.04
CLN8-213ENST00000637156 IQSEC2Q5JU85 1478 aa27.77■■■□□ 2.04
CLN8-213ENST00000637156 TMPOP42166 694 aaKnown RBP27.77■■■□□ 2.04
CLN8-213ENST00000637156 LRRC59Q96AG4 307 aaKnown RBP27.77■■■□□ 2.04
CLN8-213ENST00000637156 PHF23Q9BUL5 403 aaPredicted RBP27.77■■■□□ 2.04
CLN8-213ENST00000637156 NCBP3Q53F19 620 aaKnown RBP27.76■■■□□ 2.04
CLN8-213ENST00000637156 LTN1O94822 1766 aa27.76■■■□□ 2.04
CLN8-213ENST00000637156 PIP4K2BP78356 416 aa27.76■■■□□ 2.03
CLN8-213ENST00000637156 IGSF1Q8N6C5 1336 aa27.75■■■□□ 2.03
CLN8-213ENST00000637156 UBAP1LF5GYI3 381 aa27.74■■■□□ 2.03
CLN8-213ENST00000637156 CCDC27Q2M243 656 aa27.74■■■□□ 2.03
CLN8-213ENST00000637156 GOLGA2Q08379 1002 aa27.73■■■□□ 2.03
CLN8-213ENST00000637156 PHRF1Q9P1Y6 1649 aaKnown RBP27.73■■■□□ 2.03
CLN8-213ENST00000637156 NEFMP07197 916 aa27.72■■■□□ 2.03
CLN8-213ENST00000637156 RIPK4P57078 832 aa27.72■■■□□ 2.03
CLN8-213ENST00000637156 NBPF6Q5VWK0 638 aa27.72■■■□□ 2.03
CLN8-213ENST00000637156 CERKQ8TCT0 537 aa27.72■■■□□ 2.03
CLN8-213ENST00000637156 NBPF4Q96M43 638 aa27.72■■■□□ 2.03
CLN8-213ENST00000637156 RGPD1P0DJD0 1748 aa27.71■■■□□ 2.03
CLN8-213ENST00000637156 SPINK5Q9NQ38 1064 aaPredicted RBP27.71■■■□□ 2.03
CLN8-213ENST00000637156 TRIM35Q9UPQ4 493 aa27.71■■■□□ 2.03
CLN8-213ENST00000637156 KDRP35968 1356 aa27.71■■■□□ 2.03
CLN8-213ENST00000637156 CHRNA2Q15822 529 aa27.7■■■□□ 2.03
CLN8-213ENST00000637156 AHDC1Q5TGY3 1603 aaPredicted RBP27.7■■■□□ 2.03
CLN8-213ENST00000637156 KIAA0232Q92628 1395 aa27.7■■■□□ 2.02
CLN8-213ENST00000637156 CPDO75976 1380 aa27.69■■■□□ 2.02
CLN8-213ENST00000637156 ANKRD24Q8TF21 1146 aa27.69■■■□□ 2.02
CLN8-213ENST00000637156 CRYBG1Q9Y4K1 1723 aa27.68■■■□□ 2.02
CLN8-213ENST00000637156 SLFN5Q08AF3 891 aa27.68■■■□□ 2.02
CLN8-213ENST00000637156 NFE2L2Q16236 605 aa27.68■■■□□ 2.02
CLN8-213ENST00000637156 TRMT2AQ8IZ69 625 aaKnown RBP27.66■■■□□ 2.02
CLN8-213ENST00000637156 USHBP1Q8N6Y0 703 aa27.66■■■□□ 2.02
CLN8-213ENST00000637156 HAP1P54257 671 aaPredicted RBP27.66■■■□□ 2.02
CLN8-213ENST00000637156 WDR63Q8IWG1 891 aa27.66■■■□□ 2.02
CLN8-213ENST00000637156 DUSP27Q5VZP5 1158 aa27.64■■■□□ 2.02
CLN8-213ENST00000637156 ERBB3P21860 1342 aa27.64■■■□□ 2.02
CLN8-213ENST00000637156 PRDM11Q9NQV5 511 aa27.63■■■□□ 2.01
CLN8-213ENST00000637156 E9PSI1 815 aa27.61■■■□□ 2.01
CLN8-213ENST00000637156 SUPT16HQ9Y5B9 1047 aaKnown RBP27.61■■■□□ 2.01
CLN8-213ENST00000637156 COL18A1P39060 1754 aa27.61■■■□□ 2.01
CLN8-213ENST00000637156 FAM83GA6ND36 823 aa27.59■■■□□ 2.01
CLN8-213ENST00000637156 MTHFSDQ2M296 383 aaKnown RBP27.59■■■□□ 2.01
CLN8-213ENST00000637156 GTF3C3Q9Y5Q9 886 aa27.58■■■□□ 2.01
CLN8-213ENST00000637156 RGPD5Q99666 1765 aa27.56■■■□□ 2
CLN8-213ENST00000637156 COL16A1Q07092 1604 aaPredicted RBP27.56■■■□□ 2
CLN8-213ENST00000637156 NLRP2Q9NX02 1062 aa27.55■■■□□ 2
CLN8-213ENST00000637156 PHLPP1O60346 1717 aa27.54■■■□□ 2
CLN8-213ENST00000637156 ABCC6O95255 1503 aa27.54■■■□□ 2
CLN8-213ENST00000637156 NCAPD2Q15021 1401 aa27.54■■■□□ 2
CLN8-213ENST00000637156 CSB-PGBD3P0DP91 1061 aa27.53■■■□□ 2
CLN8-213ENST00000637156 THUMPD2Q9BTF0 503 aaKnown RBP27.53■■■□□ 2
CLN8-213ENST00000637156 CAMTA1Q9Y6Y1 1673 aa27.53■■■□□ 2
CLN8-213ENST00000637156 ABCA3Q99758 1704 aa27.52■■■□□ 2
CLN8-213ENST00000637156 DCTN1Q14203 1278 aa27.52■■■□□ 2
CLN8-213ENST00000637156 RGPD2P0DJD1 1756 aa27.52■■■□□ 2
CLN8-213ENST00000637156 LMOD3Q0VAK6 560 aa27.51■■□□□ 1.99
CLN8-213ENST00000637156 IL16Q14005 1332 aa27.51■■□□□ 1.99
CLN8-213ENST00000637156 GAS2L2Q8NHY3 880 aa27.51■■□□□ 1.99
CLN8-213ENST00000637156 COL22A1Q8NFW1 1626 aaPredicted RBP27.5■■□□□ 1.99
CLN8-213ENST00000637156 RCAN3Q9UKA8 241 aa27.49■■□□□ 1.99
CLN8-213ENST00000637156 MYH16Q9H6N6 1097 aa27.47■■□□□ 1.99
CLN8-213ENST00000637156 WDR17Q8IZU2 1322 aa27.47■■□□□ 1.99
CLN8-213ENST00000637156 MCM10Q7L590 875 aa27.47■■□□□ 1.99
CLN8-213ENST00000637156 LMO7Q8WWI1 1683 aa27.46■■□□□ 1.99
CLN8-213ENST00000637156 TSR2Q969E8 191 aaKnown RBP27.45■■□□□ 1.99
CLN8-213ENST00000637156 BTG4Q9NY30 223 aa27.45■■□□□ 1.99
CLN8-213ENST00000637156 COL5A2P05997 1499 aaPredicted RBP27.45■■□□□ 1.98
CLN8-213ENST00000637156 EVA1CP58658 441 aa27.44■■□□□ 1.98
CLN8-213ENST00000637156 CALD1Q05682 793 aaKnown RBP27.44■■□□□ 1.98
CLN8-213ENST00000637156 PLEKHO1Q53GL0 409 aaPredicted RBP27.44■■□□□ 1.98
CLN8-213ENST00000637156 TOM1L2Q6ZVM7 507 aa27.44■■□□□ 1.98
CLN8-213ENST00000637156 DLG5Q8TDM6 1919 aa27.44■■□□□ 1.98
CLN8-213ENST00000637156 GNAT3A8MTJ3 354 aa27.43■■□□□ 1.98
CLN8-213ENST00000637156 ADAMTS2O95450 1211 aa27.43■■□□□ 1.98
CLN8-213ENST00000637156 ZNF853P0CG23 659 aa27.43■■□□□ 1.98
CLN8-213ENST00000637156 AMOTQ4VCS5 1084 aa27.43■■□□□ 1.98
CLN8-213ENST00000637156 LARP1Q6PKG0 1096 aaKnown RBP27.43■■□□□ 1.98
CLN8-213ENST00000637156 STRN4Q9NRL3 753 aa27.43■■□□□ 1.98
CLN8-213ENST00000637156 RNF123Q5XPI4 1314 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms