RNA–Protein interactions for RNA: ENST00000636987.1

ARHGEF4-218, Transcript of Rho guanine nucleotide exchange factor 4, human

TSL 2

Gene ARHGEF4, Length 3,656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF4-218	ENST00000636987	U2SURP	O15042	1029 aa	Known RBP	12.53	□□□□□ -0.4
ARHGEF4-218	ENST00000636987	MORC1	Q86VD1	984 aa		12.53	□□□□□ -0.4
ARHGEF4-218	ENST00000636987	DISP3	Q9P2K9	1392 aa		12.53	□□□□□ -0.4
ARHGEF4-218	ENST00000636987	SSFA2	P28290	1259 aa		12.53	□□□□□ -0.4
ARHGEF4-218	ENST00000636987	C14orf93	Q9H972	538 aa	Known RBP	12.53	□□□□□ -0.4
ARHGEF4-218	ENST00000636987	RNF216	Q9NWF9	866 aa	Predicted RBP	12.53	□□□□□ -0.4
ARHGEF4-218	ENST00000636987	SETD1B	Q9UPS6	1966 aa	Known RBP	12.53	□□□□□ -0.4
ARHGEF4-218	ENST00000636987	RALGAPB	Q86X10	1494 aa		12.53	□□□□□ -0.4
ARHGEF4-218	ENST00000636987	APBB1	O00213	710 aa		12.52	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	CDK11B	P21127	795 aa	Known RBP	12.52	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	ZKSCAN2	Q63HK3	967 aa		12.52	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	DZIP1L	Q8IYY4	767 aa	Known RBP	12.52	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	MYCN	P04198	464 aa	Predicted RBP	12.52	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.52	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	RLBP1	P12271	317 aa		12.52	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	ADGRB3	O60242	1522 aa		12.52	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	ANKRD45	Q5TZF3	282 aa		12.51	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	CNKSR2	Q8WXI2	1034 aa		12.51	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.51	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	NKTR	P30414	1462 aa	Known RBP	12.51	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	WAPL	Q7Z5K2	1190 aa		12.51	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	MROH2A	A6NES4	1674 aa		12.51	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	OFD1	O75665	1012 aa		12.5	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	PATL2	C9JE40	543 aa	Known RBP	12.5	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	CBX1	P83916	185 aa		12.5	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	NOL8	Q76FK4	1167 aa	Known RBP	12.5	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	PRAM1	Q96QH2	718 aa		12.5	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	KIAA2012	Q0VF49	1180 aa		12.5	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	PRPF40A	O75400	957 aa	Known RBP	12.49	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	CFAP53	Q96M91	514 aa		12.49	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	TCP11L2	Q8N4U5	519 aa		12.49	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	RARS	P54136	660 aa	Known RBP	12.49	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	MYO5B	Q9ULV0	1848 aa		12.49	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.48	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	AMOTL2	Q9Y2J4	779 aa		12.48	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	TMEM131L	A2VDJ0	1609 aa		12.48	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	CSPP1	Q1MSJ5	1256 aa		12.48	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	CHRM1	P11229	460 aa	Predicted RBP	12.48	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	RBM42	Q9BTD8	480 aa	Known RBP	12.48	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	TSR2	Q969E8	191 aa	Known RBP	12.47	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	MET	P08581	1390 aa		12.47	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	SRPK2	P78362	688 aa	Known RBP	12.47	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.47	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	NGEF	Q8N5V2	710 aa		12.47	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	SCAF11	Q99590	1463 aa	Known RBP	12.46	□□□□□ -0.41
ARHGEF4-218	ENST00000636987	RGS22	Q8NE09	1264 aa		12.46	□□□□□ -0.41
ARHGEF4-218	ENST00000636987		K7ELQ4	463 aa	Predicted RBP	12.46	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	MTERF4	Q7Z6M4	381 aa	Known RBP	12.46	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	NEXMIF	Q5QGS0	1516 aa		12.46	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	MVP	Q14764	893 aa	Known RBP	12.46	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	RBM27	Q9P2N5	1060 aa	Known RBP	12.46	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	PIK3C2G	O75747	1445 aa		12.45	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	BLM	P54132	1417 aa	Predicted RBP	12.45	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	MYO3A	Q8NEV4	1616 aa		12.45	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	FAM177B	A6PVY3	158 aa		12.45	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	IGSF3	O75054	1194 aa		12.45	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	KCNA6	P17658	529 aa		12.45	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	PPP4R3B	Q5MIZ7	849 aa		12.44	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	TSC1	Q92574	1164 aa		12.44	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	ZFYVE9	O95405	1425 aa		12.44	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	SYCE3	A1L190	88 aa		12.44	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	RIPK4	P57078	832 aa		12.44	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	TESK2	Q96S53	571 aa		12.44	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.44	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	CHAF1A	Q13111	956 aa	Predicted RBP	12.44	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	C1orf115	Q9H7X2	142 aa		12.44	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	DDX19B	Q9UMR2	479 aa		12.44	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	ZNF771	Q7L3S4	317 aa	Predicted RBP	12.43	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	PROSER2	Q86WR7	435 aa	Predicted RBP	12.43	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	BAG4	O95429	457 aa	Known RBP	12.43	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	TBX22	Q9Y458	520 aa		12.43	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	MYOM2	P54296	1465 aa		12.43	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	CCDC39	Q9UFE4	941 aa		12.43	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	PLEKHG1	Q9ULL1	1385 aa		12.42	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	ELL2	O00472	640 aa	Predicted RBP	12.42	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	CABP2	Q9NPB3	220 aa		12.42	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	SPDYE4	A6NLX3	237 aa		12.42	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	RUNDC1	Q96C34	613 aa		12.42	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	UBR1	Q8IWV7	1749 aa		12.42	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	RAB3GAP1	Q15042	981 aa		12.42	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	TAOK2	Q9UL54	1235 aa		12.42	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	NPHP4	O75161	1426 aa	Predicted RBP	12.42	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	PRIM1	P49642	420 aa	Known RBP	12.41	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	EXOSC9	Q06265	439 aa	Known RBP	12.41	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.41	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	KLHL40	Q2TBA0	621 aa		12.41	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	SASS6	Q6UVJ0	657 aa		12.41	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	ZSCAN23	Q3MJ62	389 aa		12.41	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	GAS2L2	Q8NHY3	880 aa		12.41	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	DYNC1I1	O14576	645 aa		12.4	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	NUCB2	P80303	420 aa		12.4	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	BCCIP	Q9P287	314 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	IPO8	O15397	1037 aa	Known RBP	12.4	□□□□□ -0.42
ARHGEF4-218	ENST00000636987	RBSN	Q9H1K0	784 aa		12.4	□□□□□ -0.43
ARHGEF4-218	ENST00000636987	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.39	□□□□□ -0.43
ARHGEF4-218	ENST00000636987	CASC1	Q6TDU7	716 aa		12.39	□□□□□ -0.43
ARHGEF4-218	ENST00000636987	EP400NL	Q6ZTU2	488 aa		12.39	□□□□□ -0.43
ARHGEF4-218	ENST00000636987	PRR29	P0C7W0	189 aa		12.39	□□□□□ -0.43
ARHGEF4-218	ENST00000636987	NOB1	Q9ULX3	412 aa	Known RBP	12.39	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms