RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 OVOS2A0A0G2JMS6 1433 aa25.91■■□□□ 1.74
CLN6-214ENST00000636314 OVOS2A0A0J9YW53 1432 aa25.91■■□□□ 1.74
CLN6-214ENST00000636314 OVOS2Q6IE36 1432 aa25.91■■□□□ 1.74
CLN6-214ENST00000636314 KTN1Q86UP2 1357 aaKnown RBP25.91■■□□□ 1.74
CLN6-214ENST00000636314 RGPD3A6NKT7 1758 aaPredicted RBP25.9■■□□□ 1.74
CLN6-214ENST00000636314 RGPD4Q7Z3J3 1758 aa25.9■■□□□ 1.74
CLN6-214ENST00000636314 TIMELESSQ9UNS1 1208 aa25.9■■□□□ 1.74
CLN6-214ENST00000636314 ST20-MTHFSA0A0A6YYL1 179 aa25.89■■□□□ 1.74
CLN6-214ENST00000636314 C11orf95C9JLR9 678 aaPredicted RBP25.89■■□□□ 1.74
CLN6-214ENST00000636314 COL18A1P39060 1754 aa25.89■■□□□ 1.73
CLN6-214ENST00000636314 RGPD5Q99666 1765 aa25.89■■□□□ 1.73
CLN6-214ENST00000636314 TTC21BQ7Z4L5 1316 aa25.88■■□□□ 1.73
CLN6-214ENST00000636314 AATKQ6ZMQ8 1374 aa25.88■■□□□ 1.73
CLN6-214ENST00000636314 USP47Q96K76 1375 aa25.88■■□□□ 1.73
CLN6-214ENST00000636314 PPP1R1BQ9UD71 204 aaPredicted RBP25.88■■□□□ 1.73
CLN6-214ENST00000636314 TTC21AQ8NDW8 1320 aa25.88■■□□□ 1.73
CLN6-214ENST00000636314 TOM1L2Q6ZVM7 507 aa25.87■■□□□ 1.73
CLN6-214ENST00000636314 TMC1Q8TDI8 760 aa25.87■■□□□ 1.73
CLN6-214ENST00000636314 DDB1Q16531 1140 aa25.86■■□□□ 1.73
CLN6-214ENST00000636314 TESK2Q96S53 571 aa25.86■■□□□ 1.73
CLN6-214ENST00000636314 SPON1Q9HCB6 807 aa25.86■■□□□ 1.73
CLN6-214ENST00000636314 CD163L1Q9NR16 1453 aa25.85■■□□□ 1.73
CLN6-214ENST00000636314 SLC24A1O60721 1099 aa25.85■■□□□ 1.73
CLN6-214ENST00000636314 CCER1Q8TC90 406 aaPredicted RBP25.84■■□□□ 1.73
CLN6-214ENST00000636314 PUS7Q96PZ0 661 aaKnown RBP25.84■■□□□ 1.73
CLN6-214ENST00000636314 KCNQ2O43526 872 aa25.83■■□□□ 1.73
CLN6-214ENST00000636314 HDGFL2Q7Z4V5 671 aaPredicted RBP25.83■■□□□ 1.73
CLN6-214ENST00000636314 YY1P25490 414 aa25.81■■□□□ 1.72
CLN6-214ENST00000636314 SLC12A5Q9H2X9 1139 aa25.81■■□□□ 1.72
CLN6-214ENST00000636314 NINLQ9Y2I6 1382 aa25.81■■□□□ 1.72
CLN6-214ENST00000636314 USP54Q70EL1 1684 aa25.8■■□□□ 1.72
CLN6-214ENST00000636314 TERF2IPQ9NYB0 399 aa25.8■■□□□ 1.72
CLN6-214ENST00000636314 WDR17Q8IZU2 1322 aa25.8■■□□□ 1.72
CLN6-214ENST00000636314 A0A1W2PP64 1363 aa25.8■■□□□ 1.72
CLN6-214ENST00000636314 PLSCR1O15162 318 aa25.79■■□□□ 1.72
CLN6-214ENST00000636314 SOX12O15370 315 aa25.79■■□□□ 1.72
CLN6-214ENST00000636314 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.79■■□□□ 1.72
CLN6-214ENST00000636314 AXIN2Q9Y2T1 843 aa25.79■■□□□ 1.72
CLN6-214ENST00000636314 CASZ1Q86V15 1759 aa25.79■■□□□ 1.72
CLN6-214ENST00000636314 EDC4Q6P2E9 1401 aaKnown RBP25.79■■□□□ 1.72
CLN6-214ENST00000636314 KCNH5Q8NCM2 988 aa25.78■■□□□ 1.72
CLN6-214ENST00000636314 DCAF8L1A6NGE4 600 aa25.77■■□□□ 1.72
CLN6-214ENST00000636314 PTF1AQ7RTS3 328 aa25.77■■□□□ 1.72
CLN6-214ENST00000636314 BCL11BQ9C0K0 894 aaPredicted RBP25.77■■□□□ 1.72
CLN6-214ENST00000636314 NFAT5O94916 1531 aa25.77■■□□□ 1.72
CLN6-214ENST00000636314 CSB-PGBD3P0DP91 1061 aa25.76■■□□□ 1.71
CLN6-214ENST00000636314 TMF1P82094 1093 aa25.76■■□□□ 1.71
CLN6-214ENST00000636314 MARCH10Q8NA82 808 aaPredicted RBP25.76■■□□□ 1.71
CLN6-214ENST00000636314 ANO8Q9HCE9 1232 aaPredicted RBP25.76■■□□□ 1.71
CLN6-214ENST00000636314 CDCA7Q9BWT1 371 aaPredicted RBP25.75■■□□□ 1.71
CLN6-214ENST00000636314 USP31Q70CQ4 1352 aa25.74■■□□□ 1.71
CLN6-214ENST00000636314 ARHGEF25Q86VW2 580 aa25.74■■□□□ 1.71
CLN6-214ENST00000636314 NME9Q86XW9 330 aa25.73■■□□□ 1.71
CLN6-214ENST00000636314 CARD10Q9BWT7 1032 aa25.71■■□□□ 1.71
CLN6-214ENST00000636314 ABCC6O95255 1503 aa25.7■■□□□ 1.7
CLN6-214ENST00000636314 BCL9O00512 1426 aa25.7■■□□□ 1.7
CLN6-214ENST00000636314 LTN1O94822 1766 aa25.69■■□□□ 1.7
CLN6-214ENST00000636314 MYOM1P52179 1685 aa25.69■■□□□ 1.7
CLN6-214ENST00000636314 ANKRD36BQ8N2N9 1353 aa25.69■■□□□ 1.7
CLN6-214ENST00000636314 EXOC5O00471 708 aa25.68■■□□□ 1.7
CLN6-214ENST00000636314 CDCA8Q53HL2 280 aa25.68■■□□□ 1.7
CLN6-214ENST00000636314 PROM2Q8N271 834 aa25.68■■□□□ 1.7
CLN6-214ENST00000636314 PDGFDQ9GZP0 370 aaPredicted RBP25.68■■□□□ 1.7
CLN6-214ENST00000636314 ZBTB7AO95365 584 aa25.67■■□□□ 1.7
CLN6-214ENST00000636314 CCDC7Q96M83 1385 aa25.66■■□□□ 1.7
CLN6-214ENST00000636314 NHSQ6T4R5 1651 aa25.65■■□□□ 1.7
CLN6-214ENST00000636314 TXNRD1Q16881 649 aa25.65■■□□□ 1.7
CLN6-214ENST00000636314 STK32BQ9NY57 414 aa25.65■■□□□ 1.7
CLN6-214ENST00000636314 TNS2Q63HR2 1409 aa25.64■■□□□ 1.7
CLN6-214ENST00000636314 KAT6BQ8WYB5 2073 aa25.64■■□□□ 1.7
CLN6-214ENST00000636314 ATF5Q9Y2D1 282 aaPredicted RBP25.63■■□□□ 1.69
CLN6-214ENST00000636314 SLC15A2Q16348 729 aa25.6■■□□□ 1.69
CLN6-214ENST00000636314 KIF20BQ96Q89 1820 aa25.59■■□□□ 1.69
CLN6-214ENST00000636314 ACSBG1Q96GR2 724 aa25.59■■□□□ 1.69
CLN6-214ENST00000636314 PTGER2P43116 358 aa25.58■■□□□ 1.69
CLN6-214ENST00000636314 COG3Q96JB2 828 aa25.58■■□□□ 1.69
CLN6-214ENST00000636314 NLRP2Q9NX02 1062 aa25.58■■□□□ 1.69
CLN6-214ENST00000636314 BTAF1O14981 1849 aa25.58■■□□□ 1.68
CLN6-214ENST00000636314 EIF4G2P78344 907 aaKnown RBP eCLIP25.55■■□□□ 1.68
CLN6-214ENST00000636314 ERBB3P21860 1342 aa25.55■■□□□ 1.68
CLN6-214ENST00000636314 IL2RBP14784 551 aa25.53■■□□□ 1.68
CLN6-214ENST00000636314 MTFR1LQ9H019 292 aa25.53■■□□□ 1.68
CLN6-214ENST00000636314 PAPPAQ13219 1627 aa25.52■■□□□ 1.68
CLN6-214ENST00000636314 FHDC1Q9C0D6 1143 aaPredicted RBP25.52■■□□□ 1.68
CLN6-214ENST00000636314 CHD4Q14839 1912 aa25.52■■□□□ 1.68
CLN6-214ENST00000636314 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.67
CLN6-214ENST00000636314 ANKRD24Q8TF21 1146 aa25.51■■□□□ 1.67
CLN6-214ENST00000636314 FAM208AQ9UK61 1670 aaKnown RBP25.51■■□□□ 1.67
CLN6-214ENST00000636314 NSD3Q9BZ95 1437 aa25.49■■□□□ 1.67
CLN6-214ENST00000636314 SYT17Q9BSW7 474 aa25.49■■□□□ 1.67
CLN6-214ENST00000636314 POLR3GLQ9BT43 218 aa25.49■■□□□ 1.67
CLN6-214ENST00000636314 GGNBP2Q9H3C7 697 aa25.49■■□□□ 1.67
CLN6-214ENST00000636314 FYB1O15117 783 aa25.48■■□□□ 1.67
CLN6-214ENST00000636314 MAP3K19Q56UN5 1328 aa25.47■■□□□ 1.67
CLN6-214ENST00000636314 IP6K1Q92551 441 aa25.46■■□□□ 1.67
CLN6-214ENST00000636314 SGIP1Q9BQI5 828 aa25.45■■□□□ 1.66
CLN6-214ENST00000636314 RTL1A6NKG5 1358 aa25.44■■□□□ 1.66
CLN6-214ENST00000636314 AMPHP49418 695 aa25.44■■□□□ 1.66
CLN6-214ENST00000636314 ARXQ96QS3 562 aa25.44■■□□□ 1.66
CLN6-214ENST00000636314 CARD14Q9BXL6 1004 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms