RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 TMC1Q8TDI8 760 aa20.66■□□□□ 0.9
HSPG2-214ENST00000635682 AKAP12Q02952 1782 aa20.66■□□□□ 0.9
HSPG2-214ENST00000635682 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
HSPG2-214ENST00000635682 CDCA8Q53HL2 280 aa20.65■□□□□ 0.9
HSPG2-214ENST00000635682 ARHGEF25Q86VW2 580 aa20.65■□□□□ 0.9
HSPG2-214ENST00000635682 PARP4Q9UKK3 1724 aaKnown RBP20.64■□□□□ 0.9
HSPG2-214ENST00000635682 RGPD5Q99666 1765 aa20.64■□□□□ 0.89
HSPG2-214ENST00000635682 CPSF1Q10570 1443 aaKnown RBP20.63■□□□□ 0.89
HSPG2-214ENST00000635682 TTC21AQ8NDW8 1320 aa20.63■□□□□ 0.89
HSPG2-214ENST00000635682 DDB1Q16531 1140 aa20.63■□□□□ 0.89
HSPG2-214ENST00000635682 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.63■□□□□ 0.89
HSPG2-214ENST00000635682 KCNH5Q8NCM2 988 aa20.63■□□□□ 0.89
HSPG2-214ENST00000635682 WDR17Q8IZU2 1322 aa20.62■□□□□ 0.89
HSPG2-214ENST00000635682 CSB-PGBD3P0DP91 1061 aa20.62■□□□□ 0.89
HSPG2-214ENST00000635682 EIF4G2P78344 907 aaKnown RBP eCLIP20.62■□□□□ 0.89
HSPG2-214ENST00000635682 PARD3Q8TEW0 1356 aa20.61■□□□□ 0.89
HSPG2-214ENST00000635682 HDGFL2Q7Z4V5 671 aaPredicted RBP20.61■□□□□ 0.89
HSPG2-214ENST00000635682 PUS7Q96PZ0 661 aaKnown RBP20.6■□□□□ 0.89
HSPG2-214ENST00000635682 NBPF14Q5TI25 921 aa20.59■□□□□ 0.89
HSPG2-214ENST00000635682 PTF1AQ7RTS3 328 aa20.59■□□□□ 0.89
HSPG2-214ENST00000635682 TERF2IPQ9NYB0 399 aa20.59■□□□□ 0.89
HSPG2-214ENST00000635682 RREB1Q92766 1687 aa20.58■□□□□ 0.89
HSPG2-214ENST00000635682 LRRC37A3O60309 1634 aa20.58■□□□□ 0.89
HSPG2-214ENST00000635682 NME9Q86XW9 330 aa20.58■□□□□ 0.89
HSPG2-214ENST00000635682 MARCH10Q8NA82 808 aaPredicted RBP20.58■□□□□ 0.89
HSPG2-214ENST00000635682 TESK2Q96S53 571 aa20.58■□□□□ 0.89
HSPG2-214ENST00000635682 SLC12A5Q9H2X9 1139 aa20.58■□□□□ 0.89
HSPG2-214ENST00000635682 OVOS2A0A0G2JMS6 1433 aa20.58■□□□□ 0.88
HSPG2-214ENST00000635682 OVOS2A0A0J9YW53 1432 aa20.58■□□□□ 0.88
HSPG2-214ENST00000635682 OVOS2Q6IE36 1432 aa20.58■□□□□ 0.88
HSPG2-214ENST00000635682 NUP188Q5SRE5 1749 aa20.58■□□□□ 0.88
HSPG2-214ENST00000635682 C11orf95C9JLR9 678 aaPredicted RBP20.57■□□□□ 0.88
HSPG2-214ENST00000635682 CARD10Q9BWT7 1032 aa20.57■□□□□ 0.88
HSPG2-214ENST00000635682 PEAK1Q9H792 1746 aa20.57■□□□□ 0.88
HSPG2-214ENST00000635682 SBF2Q86WG5 1849 aa20.57■□□□□ 0.88
HSPG2-214ENST00000635682 NFAT5O94916 1531 aa20.56■□□□□ 0.88
HSPG2-214ENST00000635682 NINLQ9Y2I6 1382 aa20.56■□□□□ 0.88
HSPG2-214ENST00000635682 MON2Q7Z3U7 1717 aa20.56■□□□□ 0.88
HSPG2-214ENST00000635682 CD163L1Q9NR16 1453 aa20.55■□□□□ 0.88
HSPG2-214ENST00000635682 POLR3GLQ9BT43 218 aa20.54■□□□□ 0.88
HSPG2-214ENST00000635682 CDCA7Q9BWT1 371 aaPredicted RBP20.54■□□□□ 0.88
HSPG2-214ENST00000635682 WNK3Q9BYP7 1800 aa20.54■□□□□ 0.88
HSPG2-214ENST00000635682 EXOC5O00471 708 aa20.53■□□□□ 0.88
HSPG2-214ENST00000635682 BCL11BQ9C0K0 894 aaPredicted RBP20.53■□□□□ 0.88
HSPG2-214ENST00000635682 USP31Q70CQ4 1352 aa20.52■□□□□ 0.88
HSPG2-214ENST00000635682 PLSCR1O15162 318 aa20.51■□□□□ 0.87
HSPG2-214ENST00000635682 HSPA5P11021 654 aaKnown RBP20.51■□□□□ 0.87
HSPG2-214ENST00000635682 NLRP2Q9NX02 1062 aa20.5■□□□□ 0.87
HSPG2-214ENST00000635682 CCDC7Q96M83 1385 aa20.48■□□□□ 0.87
HSPG2-214ENST00000635682 PROM2Q8N271 834 aa20.48■□□□□ 0.87
HSPG2-214ENST00000635682 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
HSPG2-214ENST00000635682 LTN1O94822 1766 aa20.47■□□□□ 0.87
HSPG2-214ENST00000635682 ANO8Q9HCE9 1232 aaPredicted RBP20.47■□□□□ 0.87
HSPG2-214ENST00000635682 EDC4Q6P2E9 1401 aaKnown RBP20.46■□□□□ 0.87
HSPG2-214ENST00000635682 KAT6BQ8WYB5 2073 aa20.46■□□□□ 0.87
HSPG2-214ENST00000635682 KCNQ2O43526 872 aa20.46■□□□□ 0.87
HSPG2-214ENST00000635682 ANKRD24Q8TF21 1146 aa20.46■□□□□ 0.87
HSPG2-214ENST00000635682 ERBB3P21860 1342 aa20.46■□□□□ 0.87
HSPG2-214ENST00000635682 USP54Q70EL1 1684 aa20.45■□□□□ 0.86
HSPG2-214ENST00000635682 SPON1Q9HCB6 807 aa20.45■□□□□ 0.86
HSPG2-214ENST00000635682 BCL9O00512 1426 aa20.44■□□□□ 0.86
HSPG2-214ENST00000635682 ABCC6O95255 1503 aa20.44■□□□□ 0.86
HSPG2-214ENST00000635682 ACSBG1Q96GR2 724 aa20.44■□□□□ 0.86
HSPG2-214ENST00000635682 RGPD3A6NKT7 1758 aaPredicted RBP20.44■□□□□ 0.86
HSPG2-214ENST00000635682 RGPD4Q7Z3J3 1758 aa20.44■□□□□ 0.86
HSPG2-214ENST00000635682 PDGFDQ9GZP0 370 aaPredicted RBP20.43■□□□□ 0.86
HSPG2-214ENST00000635682 PPP1R1BQ9UD71 204 aaPredicted RBP20.43■□□□□ 0.86
HSPG2-214ENST00000635682 ANKRD36BQ8N2N9 1353 aa20.43■□□□□ 0.86
HSPG2-214ENST00000635682 IL2RBP14784 551 aa20.42■□□□□ 0.86
HSPG2-214ENST00000635682 TXNRD1Q16881 649 aa20.42■□□□□ 0.86
HSPG2-214ENST00000635682 LTV1Q96GA3 475 aaPredicted RBP20.42■□□□□ 0.86
HSPG2-214ENST00000635682 TNS2Q63HR2 1409 aa20.42■□□□□ 0.86
HSPG2-214ENST00000635682 FBLN1P23142 703 aa20.41■□□□□ 0.86
HSPG2-214ENST00000635682 IP6K1Q92551 441 aa20.39■□□□□ 0.85
HSPG2-214ENST00000635682 COG3Q96JB2 828 aa20.38■□□□□ 0.85
HSPG2-214ENST00000635682 ZBTB7AO95365 584 aa20.37■□□□□ 0.85
HSPG2-214ENST00000635682 STK32BQ9NY57 414 aa20.37■□□□□ 0.85
HSPG2-214ENST00000635682 MAP3K19Q56UN5 1328 aa20.35■□□□□ 0.85
HSPG2-214ENST00000635682 SLC15A2Q16348 729 aa20.35■□□□□ 0.85
HSPG2-214ENST00000635682 DDX54Q8TDD1 881 aaKnown RBP20.35■□□□□ 0.85
HSPG2-214ENST00000635682 ATF5Q9Y2D1 282 aaPredicted RBP20.35■□□□□ 0.85
HSPG2-214ENST00000635682 CASZ1Q86V15 1759 aa20.35■□□□□ 0.85
HSPG2-214ENST00000635682 AMPHP49418 695 aa20.34■□□□□ 0.85
HSPG2-214ENST00000635682 NHSQ6T4R5 1651 aa20.34■□□□□ 0.85
HSPG2-214ENST00000635682 HOXC9P31274 260 aa20.33■□□□□ 0.85
HSPG2-214ENST00000635682 GGNBP2Q9H3C7 697 aa20.31■□□□□ 0.84
HSPG2-214ENST00000635682 BTAF1O14981 1849 aa20.31■□□□□ 0.84
HSPG2-214ENST00000635682 NSD3Q9BZ95 1437 aa20.3■□□□□ 0.84
HSPG2-214ENST00000635682 FYB1O15117 783 aa20.3■□□□□ 0.84
HSPG2-214ENST00000635682 RRS1Q15050 365 aaKnown RBP20.3■□□□□ 0.84
HSPG2-214ENST00000635682 RGPD2P0DJD1 1756 aa20.3■□□□□ 0.84
HSPG2-214ENST00000635682 CGNL1Q0VF96 1302 aa20.29■□□□□ 0.84
HSPG2-214ENST00000635682 ZEB1P37275 1124 aaPredicted RBP20.29■□□□□ 0.84
HSPG2-214ENST00000635682 PTGER2P43116 358 aa20.29■□□□□ 0.84
HSPG2-214ENST00000635682 LRRC4BQ9NT99 713 aa20.28■□□□□ 0.84
HSPG2-214ENST00000635682 MYOM1P52179 1685 aa20.27■□□□□ 0.84
HSPG2-214ENST00000635682 YY1P25490 414 aa20.27■□□□□ 0.84
HSPG2-214ENST00000635682 FAM208AQ9UK61 1670 aaKnown RBP20.26■□□□□ 0.83
HSPG2-214ENST00000635682 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
HSPG2-214ENST00000635682 USHBP1Q8N6Y0 703 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms