RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	VPS37C	A5D8V6	355 aa	Predicted RBP	10.34	□□□□□ -0.75
SPTAN1-223	ENST00000630866	GNAT3	A8MTJ3	354 aa		10.34	□□□□□ -0.75
SPTAN1-223	ENST00000630866	SPDYE4	A6NLX3	237 aa		10.33	□□□□□ -0.76
SPTAN1-223	ENST00000630866	TTLL12	Q14166	644 aa	Predicted RBP	10.33	□□□□□ -0.76
SPTAN1-223	ENST00000630866	EPS15	P42566	896 aa		10.33	□□□□□ -0.76
SPTAN1-223	ENST00000630866	SRCIN1	Q9C0H9	1055 aa		10.33	□□□□□ -0.76
SPTAN1-223	ENST00000630866	ABCA10	Q8WWZ4	1543 aa		10.33	□□□□□ -0.76
SPTAN1-223	ENST00000630866	KDM4A	O75164	1064 aa		10.33	□□□□□ -0.76
SPTAN1-223	ENST00000630866	CCT4	P50991	539 aa	Known RBP	10.33	□□□□□ -0.76
SPTAN1-223	ENST00000630866	ODF2	Q5BJF6	829 aa		10.33	□□□□□ -0.76
SPTAN1-223	ENST00000630866	ZSCAN25	Q6NSZ9	544 aa		10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	PLCD3	Q8N3E9	789 aa		10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	RPGR	Q92834	1020 aa	Known RBP	10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	PLB1	Q6P1J6	1458 aa		10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	IBSP	P21815	317 aa	Predicted RBP	10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	EXOSC9	Q06265	439 aa	Known RBP	10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	CDK5RAP3	Q96JB5	506 aa		10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	STK11IP	Q8N1F8	1099 aa		10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	ANKIB1	Q9P2G1	1089 aa		10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	CEP126	Q9P2H0	1117 aa		10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	FANCA	O15360	1455 aa		10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	MPHOSPH10	O00566	681 aa	Known RBP	10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	NBPF8	Q3BBV2	869 aa		10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	NBPF14	Q5TI25	921 aa		10.32	□□□□□ -0.76
SPTAN1-223	ENST00000630866	DEK	P35659	375 aa	Known RBP	10.31	□□□□□ -0.76
SPTAN1-223	ENST00000630866	AMOT	Q4VCS5	1084 aa		10.31	□□□□□ -0.76
SPTAN1-223	ENST00000630866	PANK1	Q8TE04	598 aa		10.31	□□□□□ -0.76
SPTAN1-223	ENST00000630866	DDX11L8	A8MPP1	907 aa		10.31	□□□□□ -0.76
SPTAN1-223	ENST00000630866	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
SPTAN1-223	ENST00000630866	AAMP	Q13685	434 aa		10.31	□□□□□ -0.76
SPTAN1-223	ENST00000630866	CCDC70	Q6NSX1	233 aa		10.31	□□□□□ -0.76
SPTAN1-223	ENST00000630866	RAI14	Q9P0K7	980 aa		10.31	□□□□□ -0.76
SPTAN1-223	ENST00000630866	GPS2	Q13227	327 aa		10.31	□□□□□ -0.76
SPTAN1-223	ENST00000630866	LRP2BP	Q9P2M1	347 aa		10.31	□□□□□ -0.76
SPTAN1-223	ENST00000630866	BRD4	O60885	1362 aa	Predicted RBP	10.3	□□□□□ -0.76
SPTAN1-223	ENST00000630866	GOLGA6L3	A6NEY3	463 aa		10.3	□□□□□ -0.76
SPTAN1-223	ENST00000630866	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.3	□□□□□ -0.76
SPTAN1-223	ENST00000630866	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.3	□□□□□ -0.76
SPTAN1-223	ENST00000630866	DDX49	Q9Y6V7	483 aa	Known RBP	10.3	□□□□□ -0.76
SPTAN1-223	ENST00000630866	C8orf37	Q96NL8	207 aa		10.3	□□□□□ -0.76
SPTAN1-223	ENST00000630866	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.3	□□□□□ -0.76	2e-7	■■■■■ 86.5
SPTAN1-223	ENST00000630866	RBM19	Q9Y4C8	960 aa	Known RBP	10.3	□□□□□ -0.76
SPTAN1-223	ENST00000630866	IDI1	Q13907	227 aa		10.29	□□□□□ -0.76
SPTAN1-223	ENST00000630866	FAM135A	Q9P2D6	1515 aa		10.29	□□□□□ -0.76
SPTAN1-223	ENST00000630866	CAVIN4	Q5BKX8	364 aa		10.29	□□□□□ -0.76
SPTAN1-223	ENST00000630866	TNR	Q92752	1358 aa		10.29	□□□□□ -0.76
SPTAN1-223	ENST00000630866	CCDC73	Q6ZRK6	1079 aa		10.29	□□□□□ -0.76
SPTAN1-223	ENST00000630866	LMTK3	Q96Q04	1460 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	KRT18	P05783	430 aa	Known RBP	10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	TSR2	Q969E8	191 aa	Known RBP	10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	ATP2B1	P20020	1258 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	RFC4	P35249	363 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	TXLNA	P40222	546 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	HSP90AB3P	Q58FF7	597 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	SOGA3	Q5TF21	947 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	USHBP1	Q8N6Y0	703 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	ABCF2	Q9UG63	623 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	PRX	Q9BXM0	1461 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	TDO2	P48775	406 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	UNC13A	Q9UPW8	1703 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	CDC45	O75419	566 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	METTL24	Q5JXM2	366 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	ZFYVE27	Q5T4F4	411 aa		10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	NOB1	Q9ULX3	412 aa	Known RBP	10.28	□□□□□ -0.76
SPTAN1-223	ENST00000630866	WASL	O00401	505 aa	Predicted RBP	10.27	□□□□□ -0.76
SPTAN1-223	ENST00000630866	FCHSD2	O94868	740 aa		10.27	□□□□□ -0.76
SPTAN1-223	ENST00000630866	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.27	□□□□□ -0.76
SPTAN1-223	ENST00000630866	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.27	□□□□□ -0.77
SPTAN1-223	ENST00000630866	CCDC69	A6NI79	296 aa		10.27	□□□□□ -0.77
SPTAN1-223	ENST00000630866	OFD1	O75665	1012 aa		10.27	□□□□□ -0.77
SPTAN1-223	ENST00000630866	CCAR2	Q8N163	923 aa	Known RBP	10.27	□□□□□ -0.77
SPTAN1-223	ENST00000630866	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.27	□□□□□ -0.77
SPTAN1-223	ENST00000630866	CAMSAP2	Q08AD1	1489 aa		10.27	□□□□□ -0.77
SPTAN1-223	ENST00000630866	TIAM1	Q13009	1591 aa		10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	C1orf115	Q9H7X2	142 aa		10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	POLD1	P28340	1107 aa		10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	NSD3	Q9BZ95	1437 aa		10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	IPO9	Q96P70	1041 aa	Known RBP	10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	LRRCC1	Q9C099	1032 aa		10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	ZNF287	Q9HBT7	754 aa		10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	IFIT1	P09914	478 aa	Known RBP	10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	SASS6	Q6UVJ0	657 aa		10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	TRIM22	Q8IYM9	498 aa		10.26	□□□□□ -0.77
SPTAN1-223	ENST00000630866	SRGAP3	O43295	1099 aa		10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	MYCN	P04198	464 aa	Predicted RBP	10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	TRMT112	Q9UI30	125 aa	Known RBP	10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	NAP1L1	P55209	391 aa	Known RBP	10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	AACS	Q86V21	672 aa		10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	NPHP3	Q7Z494	1330 aa		10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	BICRA	Q9NZM4	1560 aa		10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	C6orf229	H3BNL8	230 aa		10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	IDH1	O75874	414 aa	Known RBP	10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	PDE4A	P27815	886 aa		10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	USP5	P45974	858 aa		10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	LARP1	Q6PKG0	1096 aa	Known RBP	10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	NUP133	Q8WUM0	1156 aa		10.25	□□□□□ -0.77

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