RNA–Protein interactions for RNA: ENST00000630539.1

CLPTM1L-216, Transcript of CLPTM1 like, humanhuman

TSL 5 BASIC

Gene CLPTM1L, Length 2,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-216ENST00000630539 AXIN2Q9Y2T1 843 aa21.89■■□□□ 1.1
CLPTM1L-216ENST00000630539 INSRP06213 1382 aa21.89■■□□□ 1.09
CLPTM1L-216ENST00000630539 RGPD5Q99666 1765 aa21.88■■□□□ 1.09
CLPTM1L-216ENST00000630539 WDR43Q15061 677 aaKnown RBP eCLIP21.88■■□□□ 1.09
CLPTM1L-216ENST00000630539 RTL1A6NKG5 1358 aa21.88■■□□□ 1.09
CLPTM1L-216ENST00000630539 U2SURPO15042 1029 aaKnown RBP21.87■■□□□ 1.09
CLPTM1L-216ENST00000630539 EIF4A2Q14240 407 aaKnown RBP21.87■■□□□ 1.09
CLPTM1L-216ENST00000630539 LTV1Q96GA3 475 aaPredicted RBP21.87■■□□□ 1.09
CLPTM1L-216ENST00000630539 ADAMTS8Q9UP79 889 aa21.87■■□□□ 1.09
CLPTM1L-216ENST00000630539 IP6K1Q92551 441 aa21.87■■□□□ 1.09
CLPTM1L-216ENST00000630539 PRDM11Q9NQV5 511 aa21.87■■□□□ 1.09
CLPTM1L-216ENST00000630539 CPDO75976 1380 aa21.86■■□□□ 1.09
CLPTM1L-216ENST00000630539 KIF24Q5T7B8 1368 aa21.86■■□□□ 1.09
CLPTM1L-216ENST00000630539 SENP3-EIF4A1A0A087X0R7 540 aa21.86■■□□□ 1.09
CLPTM1L-216ENST00000630539 NUTM2BA6NNL0 878 aaPredicted RBP21.86■■□□□ 1.09
CLPTM1L-216ENST00000630539 NUTM2EB1AL46 878 aaPredicted RBP21.86■■□□□ 1.09
CLPTM1L-216ENST00000630539 IL13P35225 146 aa21.86■■□□□ 1.09
CLPTM1L-216ENST00000630539 NUTM2AQ8IVF1 878 aaPredicted RBP21.86■■□□□ 1.09
CLPTM1L-216ENST00000630539 JCADQ9P266 1359 aa21.86■■□□□ 1.09
CLPTM1L-216ENST00000630539 COL18A1P39060 1754 aa21.85■■□□□ 1.09
CLPTM1L-216ENST00000630539 ADAMTS2O95450 1211 aa21.84■■□□□ 1.09
CLPTM1L-216ENST00000630539 U2AF1L5P0DN76 240 aaPredicted RBP21.84■■□□□ 1.09
CLPTM1L-216ENST00000630539 U2AF1Q01081 240 aaKnown RBP eCLIP21.84■■□□□ 1.09
CLPTM1L-216ENST00000630539 FAM83GA6ND36 823 aa21.82■■□□□ 1.08
CLPTM1L-216ENST00000630539 NUDCQ9Y266 331 aa21.82■■□□□ 1.08
CLPTM1L-216ENST00000630539 BLMP54132 1417 aaPredicted RBP21.81■■□□□ 1.08
CLPTM1L-216ENST00000630539 LMO7Q8WWI1 1683 aa21.81■■□□□ 1.08
CLPTM1L-216ENST00000630539 HMOX1P09601 288 aa21.8■■□□□ 1.08
CLPTM1L-216ENST00000630539 CCDC146Q8IYE0 955 aa21.8■■□□□ 1.08
CLPTM1L-216ENST00000630539 CAMTA1Q9Y6Y1 1673 aa21.8■■□□□ 1.08
CLPTM1L-216ENST00000630539 RGPD2P0DJD1 1756 aa21.8■■□□□ 1.08
CLPTM1L-216ENST00000630539 RGPD1P0DJD0 1748 aa21.8■■□□□ 1.08
CLPTM1L-216ENST00000630539 ANKRD24Q8TF21 1146 aa21.79■■□□□ 1.08
CLPTM1L-216ENST00000630539 ERBB3P21860 1342 aa21.79■■□□□ 1.08
CLPTM1L-216ENST00000630539 AEBP1Q8IUX7 1158 aa21.78■■□□□ 1.08
CLPTM1L-216ENST00000630539 EYA1Q99502 592 aa21.78■■□□□ 1.08
CLPTM1L-216ENST00000630539 LRP6O75581 1613 aa21.78■■□□□ 1.08
CLPTM1L-216ENST00000630539 ABCC6O95255 1503 aa21.77■■□□□ 1.08
CLPTM1L-216ENST00000630539 USHBP1Q8N6Y0 703 aa21.77■■□□□ 1.07
CLPTM1L-216ENST00000630539 SUPT16HQ9Y5B9 1047 aaKnown RBP21.76■■□□□ 1.07
CLPTM1L-216ENST00000630539 COL14A1Q05707 1796 aaKnown RBP21.75■■□□□ 1.07
CLPTM1L-216ENST00000630539 COL5A2P05997 1499 aaPredicted RBP21.75■■□□□ 1.07
CLPTM1L-216ENST00000630539 NBPF6Q5VWK0 638 aa21.75■■□□□ 1.07
CLPTM1L-216ENST00000630539 SULT6B1Q6IMI4 303 aa21.75■■□□□ 1.07
CLPTM1L-216ENST00000630539 NBPF4Q96M43 638 aa21.75■■□□□ 1.07
CLPTM1L-216ENST00000630539 BTG4Q9NY30 223 aa21.75■■□□□ 1.07
CLPTM1L-216ENST00000630539 SPATA31A6Q5VVP1 1343 aa21.74■■□□□ 1.07
CLPTM1L-216ENST00000630539 STRN4Q9NRL3 753 aa21.74■■□□□ 1.07
CLPTM1L-216ENST00000630539 PLCH1Q4KWH8 1693 aa21.74■■□□□ 1.07
CLPTM1L-216ENST00000630539 IGSF1Q8N6C5 1336 aa21.74■■□□□ 1.07
CLPTM1L-216ENST00000630539 HNRNPUQ00839 825 aaKnown RBP eCLIP21.73■■□□□ 1.07
CLPTM1L-216ENST00000630539 FBXO41Q8TF61 875 aa21.73■■□□□ 1.07
CLPTM1L-216ENST00000630539 CSB-PGBD3P0DP91 1061 aa21.73■■□□□ 1.07
CLPTM1L-216ENST00000630539 RSPH6AQ9H0K4 717 aa21.73■■□□□ 1.07
CLPTM1L-216ENST00000630539 PRKAR2BP31323 418 aa21.72■■□□□ 1.07
CLPTM1L-216ENST00000630539 C8orf37Q96NL8 207 aa21.72■■□□□ 1.07
CLPTM1L-216ENST00000630539 PLEKHF1Q96S99 279 aa21.7■■□□□ 1.06
CLPTM1L-216ENST00000630539 NLRP2Q9NX02 1062 aa21.7■■□□□ 1.06
CLPTM1L-216ENST00000630539 SALL2Q9Y467 1007 aaPredicted RBP21.7■■□□□ 1.06
CLPTM1L-216ENST00000630539 FCHSD2O94868 740 aa21.7■■□□□ 1.06
CLPTM1L-216ENST00000630539 LARP1Q6PKG0 1096 aaKnown RBP21.69■■□□□ 1.06
CLPTM1L-216ENST00000630539 KDRP35968 1356 aa21.69■■□□□ 1.06
CLPTM1L-216ENST00000630539 EVA1CP58658 441 aa21.68■■□□□ 1.06
CLPTM1L-216ENST00000630539 WDR17Q8IZU2 1322 aa21.68■■□□□ 1.06
CLPTM1L-216ENST00000630539 FAM208AQ9UK61 1670 aaKnown RBP21.68■■□□□ 1.06
CLPTM1L-216ENST00000630539 RUNDC1Q96C34 613 aa21.68■■□□□ 1.06
CLPTM1L-216ENST00000630539 PHACTR3Q96KR7 559 aa21.68■■□□□ 1.06
CLPTM1L-216ENST00000630539 APAF1O14727 1248 aa21.67■■□□□ 1.06
CLPTM1L-216ENST00000630539 TOM1L2Q6ZVM7 507 aa21.67■■□□□ 1.06
CLPTM1L-216ENST00000630539 RRP7AQ9Y3A4 280 aaKnown RBP21.67■■□□□ 1.06
CLPTM1L-216ENST00000630539 NGLY1Q96IV0 654 aa21.66■■□□□ 1.06
CLPTM1L-216ENST00000630539 USP35Q9P2H5 1018 aa21.66■■□□□ 1.06
CLPTM1L-216ENST00000630539 NRAPQ86VF7 1730 aa21.66■■□□□ 1.06
CLPTM1L-216ENST00000630539 MEX3CQ5U5Q3 659 aaKnown RBP21.65■■□□□ 1.06
CLPTM1L-216ENST00000630539 SLIT2O94813 1529 aa21.65■■□□□ 1.06
CLPTM1L-216ENST00000630539 MAPK8IP3Q9UPT6 1336 aa21.65■■□□□ 1.06
CLPTM1L-216ENST00000630539 NEUROD2Q15784 382 aa21.65■■□□□ 1.06
CLPTM1L-216ENST00000630539 TCP11L2Q8N4U5 519 aa21.65■■□□□ 1.06
CLPTM1L-216ENST00000630539 NCAPD2Q15021 1401 aa21.64■■□□□ 1.06
CLPTM1L-216ENST00000630539 NWD2Q9ULI1 1742 aa21.64■■□□□ 1.05
CLPTM1L-216ENST00000630539 CRB1P82279 1406 aa21.62■■□□□ 1.05
CLPTM1L-216ENST00000630539 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
CLPTM1L-216ENST00000630539 BCL9LQ86UU0 1499 aa21.61■■□□□ 1.05
CLPTM1L-216ENST00000630539 NEFMP07197 916 aa21.6■■□□□ 1.05
CLPTM1L-216ENST00000630539 MEGF6O75095 1541 aa21.6■■□□□ 1.05
CLPTM1L-216ENST00000630539 CARD10Q9BWT7 1032 aa21.59■■□□□ 1.05
CLPTM1L-216ENST00000630539 TMPOP42166 694 aaKnown RBP21.58■■□□□ 1.05
CLPTM1L-216ENST00000630539 FNBP4Q8N3X1 1017 aaPredicted RBP21.58■■□□□ 1.05
CLPTM1L-216ENST00000630539 MTHFSDQ2M296 383 aaKnown RBP21.57■■□□□ 1.04
CLPTM1L-216ENST00000630539 UNC5CLQ8IV45 518 aa21.57■■□□□ 1.04
CLPTM1L-216ENST00000630539 USP21Q9UK80 565 aa21.57■■□□□ 1.04
CLPTM1L-216ENST00000630539 RAPGEF4Q8WZA2 1011 aa21.56■■□□□ 1.04
CLPTM1L-216ENST00000630539 AFF2P51816 1311 aa21.56■■□□□ 1.04
CLPTM1L-216ENST00000630539 ZBED9Q6R2W3 1325 aa21.56■■□□□ 1.04
CLPTM1L-216ENST00000630539 DLG5Q8TDM6 1919 aa21.56■■□□□ 1.04
CLPTM1L-216ENST00000630539 CCDC9Q9Y3X0 531 aaKnown RBP21.56■■□□□ 1.04
CLPTM1L-216ENST00000630539 RIPK4P57078 832 aa21.55■■□□□ 1.04
CLPTM1L-216ENST00000630539 NFE2L2Q16236 605 aa21.55■■□□□ 1.04
CLPTM1L-216ENST00000630539 SPATA31A1Q5TZJ5 1347 aa21.53■■□□□ 1.04
CLPTM1L-216ENST00000630539 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms