RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 TMF1P82094 1093 aa12.75□□□□□ -0.37
PKP4-218ENST00000629219 MYT1Q01538 1121 aa12.75□□□□□ -0.37
PKP4-218ENST00000629219 OVOS2Q6IE36 1432 aa12.75□□□□□ -0.37
PKP4-218ENST00000629219 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
PKP4-218ENST00000629219 PCGF6Q9BYE7 350 aa12.75□□□□□ -0.37
PKP4-218ENST00000629219 DISP2A7MBM2 1401 aa12.74□□□□□ -0.37
PKP4-218ENST00000629219 C11orf95C9JLR9 678 aaPredicted RBP12.74□□□□□ -0.37
PKP4-218ENST00000629219 BAG6P46379 1132 aa12.74□□□□□ -0.37
PKP4-218ENST00000629219 EVA1CP58658 441 aa12.74□□□□□ -0.37
PKP4-218ENST00000629219 R3HDM1Q15032 1099 aaKnown RBP12.74□□□□□ -0.37
PKP4-218ENST00000629219 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
PKP4-218ENST00000629219 SLC12A5Q9H2X9 1139 aa12.74□□□□□ -0.37
PKP4-218ENST00000629219 LTN1O94822 1766 aa12.74□□□□□ -0.37
PKP4-218ENST00000629219 RGPD5Q99666 1765 aa12.73□□□□□ -0.37
PKP4-218ENST00000629219 WDR17Q8IZU2 1322 aa12.72□□□□□ -0.37
PKP4-218ENST00000629219 TNS1Q9HBL0 1735 aaKnown RBP12.72□□□□□ -0.37
PKP4-218ENST00000629219 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
PKP4-218ENST00000629219 TMC1Q8TDI8 760 aa12.72□□□□□ -0.37
PKP4-218ENST00000629219 STRN4Q9NRL3 753 aa12.72□□□□□ -0.37
PKP4-218ENST00000629219 MYOM1P52179 1685 aa12.72□□□□□ -0.37
PKP4-218ENST00000629219 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
PKP4-218ENST00000629219 EZH2Q15910 746 aaKnown RBP12.71□□□□□ -0.37
PKP4-218ENST00000629219 CDCA7Q9BWT1 371 aaPredicted RBP12.71□□□□□ -0.37
PKP4-218ENST00000629219 LRRC37A3O60309 1634 aa12.7□□□□□ -0.38
PKP4-218ENST00000629219 BCL9O00512 1426 aa12.7□□□□□ -0.38
PKP4-218ENST00000629219 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
PKP4-218ENST00000629219 PEAK1Q9H792 1746 aa12.69□□□□□ -0.38
PKP4-218ENST00000629219 FAM196AQ6ZSG2 479 aa12.69□□□□□ -0.38
PKP4-218ENST00000629219 CARD10Q9BWT7 1032 aa12.69□□□□□ -0.38
PKP4-218ENST00000629219 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
PKP4-218ENST00000629219 RGPD3A6NKT7 1758 aaPredicted RBP12.69□□□□□ -0.38
PKP4-218ENST00000629219 RGPD4Q7Z3J3 1758 aa12.69□□□□□ -0.38
PKP4-218ENST00000629219 NME9Q86XW9 330 aa12.68□□□□□ -0.38
PKP4-218ENST00000629219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.68□□□□□ -0.38
PKP4-218ENST00000629219 CCER1Q8TC90 406 aaPredicted RBP12.68□□□□□ -0.38
PKP4-218ENST00000629219 AXIN2Q9Y2T1 843 aa12.68□□□□□ -0.38
PKP4-218ENST00000629219 PARD3Q8TEW0 1356 aa12.68□□□□□ -0.38
PKP4-218ENST00000629219 ERBB3P21860 1342 aa12.67□□□□□ -0.38
PKP4-218ENST00000629219 TRIM37O94972 964 aa12.67□□□□□ -0.38
PKP4-218ENST00000629219 CAMKK2Q96RR4 588 aa12.67□□□□□ -0.38
PKP4-218ENST00000629219 OVOS2A0A0G2JMS6 1433 aa12.66□□□□□ -0.38
PKP4-218ENST00000629219 PDE3BQ13370 1112 aa12.66□□□□□ -0.38
PKP4-218ENST00000629219 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
PKP4-218ENST00000629219 RTL1A6NKG5 1358 aa12.66□□□□□ -0.38
PKP4-218ENST00000629219 KIF24Q5T7B8 1368 aa12.66□□□□□ -0.38
PKP4-218ENST00000629219 TOM1L2Q6ZVM7 507 aa12.65□□□□□ -0.38
PKP4-218ENST00000629219 COG3Q96JB2 828 aa12.65□□□□□ -0.38
PKP4-218ENST00000629219 USP35Q9P2H5 1018 aa12.64□□□□□ -0.39
PKP4-218ENST00000629219 RREB1Q92766 1687 aa12.64□□□□□ -0.39
PKP4-218ENST00000629219 TNS2Q63HR2 1409 aa12.63□□□□□ -0.39
PKP4-218ENST00000629219 ANKRD26Q9UPS8 1709 aa12.63□□□□□ -0.39
PKP4-218ENST00000629219 EIF4G2P78344 907 aaKnown RBP eCLIP12.63□□□□□ -0.39
PKP4-218ENST00000629219 IP6K1Q92551 441 aa12.63□□□□□ -0.39
PKP4-218ENST00000629219 FYB1O15117 783 aa12.62□□□□□ -0.39
PKP4-218ENST00000629219 APBA3O96018 575 aa12.62□□□□□ -0.39
PKP4-218ENST00000629219 DDB1Q16531 1140 aa12.62□□□□□ -0.39
PKP4-218ENST00000629219 ZBTB7CA1YPR0 619 aa12.61□□□□□ -0.39
PKP4-218ENST00000629219 SOX12O15370 315 aa12.61□□□□□ -0.39
PKP4-218ENST00000629219 CSB-PGBD3P0DP91 1061 aa12.61□□□□□ -0.39
PKP4-218ENST00000629219 YY1P25490 414 aa12.6□□□□□ -0.39
PKP4-218ENST00000629219 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
PKP4-218ENST00000629219 ANKRD24Q8TF21 1146 aa12.59□□□□□ -0.39
PKP4-218ENST00000629219 NSD3Q9BZ95 1437 aa12.59□□□□□ -0.39
PKP4-218ENST00000629219 NHSQ6T4R5 1651 aa12.58□□□□□ -0.4
PKP4-218ENST00000629219 HOXC9P31274 260 aa12.58□□□□□ -0.4
PKP4-218ENST00000629219 NUP188Q5SRE5 1749 aa12.58□□□□□ -0.4
PKP4-218ENST00000629219 CARD14Q9BXL6 1004 aa12.58□□□□□ -0.4
PKP4-218ENST00000629219 CGNL1Q0VF96 1302 aa12.58□□□□□ -0.4
PKP4-218ENST00000629219 NSD2O96028 1365 aa12.57□□□□□ -0.4
PKP4-218ENST00000629219 EXOC5O00471 708 aa12.57□□□□□ -0.4
PKP4-218ENST00000629219 HSPA5P11021 654 aaKnown RBP12.57□□□□□ -0.4
PKP4-218ENST00000629219 IL2RBP14784 551 aa12.57□□□□□ -0.4
PKP4-218ENST00000629219 INSRP06213 1382 aa12.56□□□□□ -0.4
PKP4-218ENST00000629219 FLT4P35916 1363 aa12.56□□□□□ -0.4
PKP4-218ENST00000629219 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
PKP4-218ENST00000629219 PLSCR1O15162 318 aa12.56□□□□□ -0.4
PKP4-218ENST00000629219 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
PKP4-218ENST00000629219 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
PKP4-218ENST00000629219 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
PKP4-218ENST00000629219 NCAPD2Q15021 1401 aa12.55□□□□□ -0.4
PKP4-218ENST00000629219 AMPHP49418 695 aa12.55□□□□□ -0.4
PKP4-218ENST00000629219 MARCH10Q8NA82 808 aaPredicted RBP12.55□□□□□ -0.4
PKP4-218ENST00000629219 GGNBP2Q9H3C7 697 aa12.55□□□□□ -0.4
PKP4-218ENST00000629219 NLRP2Q9NX02 1062 aa12.55□□□□□ -0.4
PKP4-218ENST00000629219 RGPD2P0DJD1 1756 aa12.55□□□□□ -0.4
PKP4-218ENST00000629219 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
PKP4-218ENST00000629219 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
PKP4-218ENST00000629219 PTF1AQ7RTS3 328 aa12.53□□□□□ -0.4
PKP4-218ENST00000629219 KCNQ2O43526 872 aa12.52□□□□□ -0.41
PKP4-218ENST00000629219 PDGFDQ9GZP0 370 aaPredicted RBP12.52□□□□□ -0.41
PKP4-218ENST00000629219 UTRNP46939 3433 aa12.51□□□□□ -0.41
PKP4-218ENST00000629219 RRS1Q15050 365 aaKnown RBP12.51□□□□□ -0.41
PKP4-218ENST00000629219 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
PKP4-218ENST00000629219 PPP1R1BQ9UD71 204 aaPredicted RBP12.51□□□□□ -0.41
PKP4-218ENST00000629219 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
PKP4-218ENST00000629219 ANO8Q9HCE9 1232 aaPredicted RBP12.5□□□□□ -0.41
PKP4-218ENST00000629219 WASHC2AQ641Q2 1341 aa12.5□□□□□ -0.41
PKP4-218ENST00000629219 MEGF6O75095 1541 aa12.5□□□□□ -0.41
PKP4-218ENST00000629219 BTAF1O14981 1849 aa12.5□□□□□ -0.41
PKP4-218ENST00000629219 FBLN1P23142 703 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms