RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 CHRNA2Q15822 529 aa23.69■■□□□ 1.38
SPTAN1-217ENST00000629089 IP6K1Q92551 441 aa23.69■■□□□ 1.38
SPTAN1-217ENST00000629089 HSP90AB2PQ58FF8 381 aa23.68■■□□□ 1.38
SPTAN1-217ENST00000629089 ADAMTS2O95450 1211 aa23.67■■□□□ 1.38
SPTAN1-217ENST00000629089 INSRP06213 1382 aa23.66■■□□□ 1.38
SPTAN1-217ENST00000629089 DIAPH1O60610 1272 aaKnown RBP23.65■■□□□ 1.38
SPTAN1-217ENST00000629089 COL3A1P02461 1466 aaPredicted RBP23.65■■□□□ 1.38
SPTAN1-217ENST00000629089 BLMP54132 1417 aaPredicted RBP23.64■■□□□ 1.37
SPTAN1-217ENST00000629089 ABCC6O95255 1503 aa23.63■■□□□ 1.37
SPTAN1-217ENST00000629089 COL18A1P39060 1754 aa23.63■■□□□ 1.37
SPTAN1-217ENST00000629089 FAM83GA6ND36 823 aa23.63■■□□□ 1.37
SPTAN1-217ENST00000629089 LTV1Q96GA3 475 aaPredicted RBP23.63■■□□□ 1.37
SPTAN1-217ENST00000629089 NUDCQ9Y266 331 aa23.63■■□□□ 1.37
SPTAN1-217ENST00000629089 AXIN2Q9Y2T1 843 aa23.63■■□□□ 1.37
SPTAN1-217ENST00000629089 RGPD5Q99666 1765 aa23.62■■□□□ 1.37
SPTAN1-217ENST00000629089 COL14A1Q05707 1796 aaKnown RBP23.61■■□□□ 1.37
SPTAN1-217ENST00000629089 EIF4A2Q14240 407 aaKnown RBP23.61■■□□□ 1.37
SPTAN1-217ENST00000629089 WDR43Q15061 677 aaKnown RBP eCLIP23.61■■□□□ 1.37
SPTAN1-217ENST00000629089 U2SURPO15042 1029 aaKnown RBP23.6■■□□□ 1.37
SPTAN1-217ENST00000629089 LMO7Q8WWI1 1683 aa23.6■■□□□ 1.37
SPTAN1-217ENST00000629089 LRP6O75581 1613 aa23.6■■□□□ 1.37
SPTAN1-217ENST00000629089 IL13P35225 146 aa23.59■■□□□ 1.37
SPTAN1-217ENST00000629089 FAM9BQ8IZU0 186 aa23.59■■□□□ 1.37
SPTAN1-217ENST00000629089 PNISRQ8TF01 805 aaKnown RBP23.59■■□□□ 1.37
SPTAN1-217ENST00000629089 MEX3CQ5U5Q3 659 aaKnown RBP23.59■■□□□ 1.37
SPTAN1-217ENST00000629089 ANKRD24Q8TF21 1146 aa23.59■■□□□ 1.37
SPTAN1-217ENST00000629089 CAMTA1Q9Y6Y1 1673 aa23.57■■□□□ 1.36
SPTAN1-217ENST00000629089 BTG4Q9NY30 223 aa23.57■■□□□ 1.36
SPTAN1-217ENST00000629089 ERBB3P21860 1342 aa23.56■■□□□ 1.36
SPTAN1-217ENST00000629089 CSB-PGBD3P0DP91 1061 aa23.56■■□□□ 1.36
SPTAN1-217ENST00000629089 C8orf37Q96NL8 207 aa23.56■■□□□ 1.36
SPTAN1-217ENST00000629089 PLCH1Q4KWH8 1693 aa23.55■■□□□ 1.36
SPTAN1-217ENST00000629089 U2AF1L5P0DN76 240 aaPredicted RBP23.55■■□□□ 1.36
SPTAN1-217ENST00000629089 EVA1CP58658 441 aa23.55■■□□□ 1.36
SPTAN1-217ENST00000629089 U2AF1Q01081 240 aaKnown RBP eCLIP23.55■■□□□ 1.36
SPTAN1-217ENST00000629089 STRN4Q9NRL3 753 aa23.54■■□□□ 1.36
SPTAN1-217ENST00000629089 COL5A2P05997 1499 aaPredicted RBP23.54■■□□□ 1.36
SPTAN1-217ENST00000629089 NGLY1Q96IV0 654 aa23.54■■□□□ 1.36
SPTAN1-217ENST00000629089 ADAMTS8Q9UP79 889 aa23.53■■□□□ 1.36
SPTAN1-217ENST00000629089 EYA1Q99502 592 aa23.52■■□□□ 1.36
SPTAN1-217ENST00000629089 FAM208AQ9UK61 1670 aaKnown RBP23.5■■□□□ 1.35
SPTAN1-217ENST00000629089 NLRP2Q9NX02 1062 aa23.5■■□□□ 1.35
SPTAN1-217ENST00000629089 RGPD1P0DJD0 1748 aa23.5■■□□□ 1.35
SPTAN1-217ENST00000629089 NWD2Q9ULI1 1742 aa23.5■■□□□ 1.35
SPTAN1-217ENST00000629089 WDR17Q8IZU2 1322 aa23.5■■□□□ 1.35
SPTAN1-217ENST00000629089 RGPD2P0DJD1 1756 aa23.5■■□□□ 1.35
SPTAN1-217ENST00000629089 SLIT2O94813 1529 aa23.49■■□□□ 1.35
SPTAN1-217ENST00000629089 HMOX1P09601 288 aa23.49■■□□□ 1.35
SPTAN1-217ENST00000629089 NBPF6Q5VWK0 638 aa23.49■■□□□ 1.35
SPTAN1-217ENST00000629089 TOM1L2Q6ZVM7 507 aa23.49■■□□□ 1.35
SPTAN1-217ENST00000629089 NBPF4Q96M43 638 aa23.49■■□□□ 1.35
SPTAN1-217ENST00000629089 IGSF1Q8N6C5 1336 aa23.49■■□□□ 1.35
SPTAN1-217ENST00000629089 SULT6B1Q6IMI4 303 aa23.49■■□□□ 1.35
SPTAN1-217ENST00000629089 USHBP1Q8N6Y0 703 aa23.48■■□□□ 1.35
SPTAN1-217ENST00000629089 NRAPQ86VF7 1730 aa23.47■■□□□ 1.35
SPTAN1-217ENST00000629089 LARP1Q6PKG0 1096 aaKnown RBP23.47■■□□□ 1.35
SPTAN1-217ENST00000629089 FCHSD2O94868 740 aa23.45■■□□□ 1.34
SPTAN1-217ENST00000629089 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.34
SPTAN1-217ENST00000629089 FNBP4Q8N3X1 1017 aaPredicted RBP23.45■■□□□ 1.34
SPTAN1-217ENST00000629089 PNNQ9H307 717 aaKnown RBP23.45■■□□□ 1.34
SPTAN1-217ENST00000629089 CRB1P82279 1406 aa23.44■■□□□ 1.34
SPTAN1-217ENST00000629089 UNC5CLQ8IV45 518 aa23.44■■□□□ 1.34
SPTAN1-217ENST00000629089 USP21Q9UK80 565 aa23.44■■□□□ 1.34
SPTAN1-217ENST00000629089 CCDC146Q8IYE0 955 aa23.43■■□□□ 1.34
SPTAN1-217ENST00000629089 RSPH6AQ9H0K4 717 aa23.43■■□□□ 1.34
SPTAN1-217ENST00000629089 AFF2P51816 1311 aa23.43■■□□□ 1.34
SPTAN1-217ENST00000629089 KDRP35968 1356 aa23.42■■□□□ 1.34
SPTAN1-217ENST00000629089 NEFMP07197 916 aa23.42■■□□□ 1.34
SPTAN1-217ENST00000629089 PRKAR2BP31323 418 aa23.42■■□□□ 1.34
SPTAN1-217ENST00000629089 CARD10Q9BWT7 1032 aa23.42■■□□□ 1.34
SPTAN1-217ENST00000629089 USP35Q9P2H5 1018 aa23.42■■□□□ 1.34
SPTAN1-217ENST00000629089 BCL9LQ86UU0 1499 aa23.42■■□□□ 1.34
SPTAN1-217ENST00000629089 CCDC9Q9Y3X0 531 aaKnown RBP23.41■■□□□ 1.34
SPTAN1-217ENST00000629089 ILDR1Q86SU0 546 aaPredicted RBP23.4■■□□□ 1.34
SPTAN1-217ENST00000629089 RUNDC1Q96C34 613 aa23.4■■□□□ 1.34
SPTAN1-217ENST00000629089 NCAPD2Q15021 1401 aa23.4■■□□□ 1.34
SPTAN1-217ENST00000629089 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.4■■□□□ 1.34
SPTAN1-217ENST00000629089 MAPK8IP3Q9UPT6 1336 aa23.4■■□□□ 1.34
SPTAN1-217ENST00000629089 PLEKHF1Q96S99 279 aa23.38■■□□□ 1.33
SPTAN1-217ENST00000629089 RAPGEF4Q8WZA2 1011 aa23.37■■□□□ 1.33
SPTAN1-217ENST00000629089 VPS72Q15906 364 aa23.36■■□□□ 1.33
SPTAN1-217ENST00000629089 SPATA31A1Q5TZJ5 1347 aa23.35■■□□□ 1.33
SPTAN1-217ENST00000629089 SPATA31A5Q5VU36 1347 aa23.35■■□□□ 1.33
SPTAN1-217ENST00000629089 SPATA31A7Q8IWB4 1347 aa23.35■■□□□ 1.33
SPTAN1-217ENST00000629089 TATP17735 454 aaPredicted RBP23.34■■□□□ 1.33
SPTAN1-217ENST00000629089 TCP11L2Q8N4U5 519 aa23.34■■□□□ 1.33
SPTAN1-217ENST00000629089 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
SPTAN1-217ENST00000629089 SENP3-EIF4A1A0A087X0R7 540 aa23.33■■□□□ 1.33
SPTAN1-217ENST00000629089 PHACTR3Q96KR7 559 aa23.33■■□□□ 1.33
SPTAN1-217ENST00000629089 APAF1O14727 1248 aa23.33■■□□□ 1.32
SPTAN1-217ENST00000629089 IL2RBP14784 551 aa23.33■■□□□ 1.32
SPTAN1-217ENST00000629089 TRPC5Q9UL62 973 aaPredicted RBP23.33■■□□□ 1.32
SPTAN1-217ENST00000629089 THRAP3Q9Y2W1 955 aaKnown RBP23.33■■□□□ 1.32
SPTAN1-217ENST00000629089 MEGF6O75095 1541 aa23.32■■□□□ 1.32
SPTAN1-217ENST00000629089 HNRNPUQ00839 825 aaKnown RBP eCLIP23.32■■□□□ 1.32
SPTAN1-217ENST00000629089 ZNF772Q68DY9 489 aaPredicted RBP23.31■■□□□ 1.32
SPTAN1-217ENST00000629089 PARP4Q9UKK3 1724 aaKnown RBP23.3■■□□□ 1.32
SPTAN1-217ENST00000629089 ATRNO75882 1429 aa23.29■■□□□ 1.32
SPTAN1-217ENST00000629089 PLEKHO1Q53GL0 409 aaPredicted RBP23.29■■□□□ 1.32
SPTAN1-217ENST00000629089 QTRT2Q9H974 415 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms