RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 WAPLQ7Z5K2 1190 aa11.24□□□□□ -0.61
TCF4-260ENST00000627685 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
TCF4-260ENST00000627685 TRPM1Q7Z4N2 1603 aa11.24□□□□□ -0.61
TCF4-260ENST00000627685 COL22A1Q8NFW1 1626 aaPredicted RBP11.24□□□□□ -0.61
TCF4-260ENST00000627685 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
TCF4-260ENST00000627685 DDX17Q92841 729 aaKnown RBP11.23□□□□□ -0.61
TCF4-260ENST00000627685 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.612e-6■■■□□ 17.4
TCF4-260ENST00000627685 SLC34A2O95436 690 aa11.22□□□□□ -0.61
TCF4-260ENST00000627685 PNPLA6Q8IY17 1366 aa11.22□□□□□ -0.61
TCF4-260ENST00000627685 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
TCF4-260ENST00000627685 JCADQ9P266 1359 aa11.22□□□□□ -0.61
TCF4-260ENST00000627685 SOS2Q07890 1332 aaPredicted RBP11.21□□□□□ -0.61
TCF4-260ENST00000627685 SOCS7O14512 581 aa11.21□□□□□ -0.61
TCF4-260ENST00000627685 ATF3P18847 181 aa11.21□□□□□ -0.61
TCF4-260ENST00000627685 ORAI2Q96SN7 254 aa11.21□□□□□ -0.61
TCF4-260ENST00000627685 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
TCF4-260ENST00000627685 TOPAZ1Q8N9V7 1692 aa11.2□□□□□ -0.62
TCF4-260ENST00000627685 ATP7BP35670 1465 aa11.2□□□□□ -0.62
TCF4-260ENST00000627685 ERBB3P21860 1342 aa11.2□□□□□ -0.62
TCF4-260ENST00000627685 PRR36Q9H6K5 1346 aa11.2□□□□□ -0.62
TCF4-260ENST00000627685 C14orf37Q86TY3 774 aa11.2□□□□□ -0.62
TCF4-260ENST00000627685 DCAF11Q8TEB1 546 aa11.2□□□□□ -0.62
TCF4-260ENST00000627685 SIN3AQ96ST3 1273 aa11.2□□□□□ -0.62
TCF4-260ENST00000627685 STK26Q9P289 416 aa11.2□□□□□ -0.62
TCF4-260ENST00000627685 KIF1AQ12756 1690 aa11.2□□□□□ -0.62
TCF4-260ENST00000627685 TULP4Q9NRJ4 1543 aa11.19□□□□□ -0.62
TCF4-260ENST00000627685 TRPM3Q9HCF6 1732 aaPredicted RBP11.19□□□□□ -0.62
TCF4-260ENST00000627685 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
TCF4-260ENST00000627685 HS3ST6Q96QI5 342 aa11.18□□□□□ -0.62
TCF4-260ENST00000627685 ABCA3Q99758 1704 aa11.18□□□□□ -0.62
TCF4-260ENST00000627685 CRYBG1Q9Y4K1 1723 aa11.18□□□□□ -0.62
TCF4-260ENST00000627685 ANKARQ7Z5J8 1434 aa11.18□□□□□ -0.62
TCF4-260ENST00000627685 NUDT7P0C024 238 aa11.17□□□□□ -0.62
TCF4-260ENST00000627685 MFSD10Q14728 455 aa11.17□□□□□ -0.62
TCF4-260ENST00000627685 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
TCF4-260ENST00000627685 PTCD2Q8WV60 388 aaKnown RBP11.17□□□□□ -0.62
TCF4-260ENST00000627685 UPF1Q92900 1129 aaKnown RBP eCLIP11.17□□□□□ -0.62
TCF4-260ENST00000627685 L3MBTL2Q969R5 705 aa11.17□□□□□ -0.62
TCF4-260ENST00000627685 PRAM1Q96QH2 718 aa11.17□□□□□ -0.62
TCF4-260ENST00000627685 RGPD8O14715 1765 aaPredicted RBP11.17□□□□□ -0.62
TCF4-260ENST00000627685 GPRASP1Q5JY77 1395 aa11.16□□□□□ -0.62
TCF4-260ENST00000627685 TRIM26Q12899 539 aaPredicted RBP11.16□□□□□ -0.62
TCF4-260ENST00000627685 STAC3Q96MF2 364 aa11.16□□□□□ -0.62
TCF4-260ENST00000627685 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
TCF4-260ENST00000627685 SPATA31A6Q5VVP1 1343 aa11.15□□□□□ -0.62
TCF4-260ENST00000627685 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
TCF4-260ENST00000627685 TBC1D12O60347 775 aa11.15□□□□□ -0.62
TCF4-260ENST00000627685 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
TCF4-260ENST00000627685 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
TCF4-260ENST00000627685 ALS2Q96Q42 1657 aa11.14□□□□□ -0.63
TCF4-260ENST00000627685 NBPF8Q3BBV2 869 aa11.14□□□□□ -0.63
TCF4-260ENST00000627685 VARS2Q5ST30 1063 aaKnown RBP11.14□□□□□ -0.63
TCF4-260ENST00000627685 POTEAQ6S8J7 498 aa11.14□□□□□ -0.63
TCF4-260ENST00000627685 RALGAPBQ86X10 1494 aa11.13□□□□□ -0.63
TCF4-260ENST00000627685 TRAK1Q9UPV9 953 aa11.13□□□□□ -0.63
TCF4-260ENST00000627685 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
TCF4-260ENST00000627685 OXER1Q8TDS5 423 aa11.12□□□□□ -0.63
TCF4-260ENST00000627685 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
TCF4-260ENST00000627685 NUTM2FA1L443 756 aa11.11□□□□□ -0.63
TCF4-260ENST00000627685 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
TCF4-260ENST00000627685 SAFB2Q14151 953 aaKnown RBP eCLIP11.11□□□□□ -0.63
TCF4-260ENST00000627685 TNS3Q68CZ2 1445 aa11.1□□□□□ -0.63
TCF4-260ENST00000627685 HIRIP3Q9BW71 556 aaPredicted RBP11.1□□□□□ -0.63
TCF4-260ENST00000627685 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
TCF4-260ENST00000627685 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
TCF4-260ENST00000627685 WASLO00401 505 aaPredicted RBP11.09□□□□□ -0.63
TCF4-260ENST00000627685 FOXO3O43524 673 aa11.09□□□□□ -0.63
TCF4-260ENST00000627685 PLCB2Q00722 1185 aa11.09□□□□□ -0.63
TCF4-260ENST00000627685 XPCQ01831 940 aaPredicted RBP11.09□□□□□ -0.63
TCF4-260ENST00000627685 LRRC59Q96AG4 307 aaKnown RBP11.09□□□□□ -0.63
TCF4-260ENST00000627685 LHX6Q9UPM6 363 aa11.09□□□□□ -0.63
TCF4-260ENST00000627685 MARF1Q9Y4F3 1742 aaKnown RBP11.09□□□□□ -0.63
TCF4-260ENST00000627685 SPATA31A3Q5VYP0 1347 aa11.09□□□□□ -0.63
TCF4-260ENST00000627685 NRKQ7Z2Y5 1582 aa11.08□□□□□ -0.64
TCF4-260ENST00000627685 SBNO1A3KN83 1393 aa11.08□□□□□ -0.64
TCF4-260ENST00000627685 POLR3AO14802 1390 aaPredicted RBP11.08□□□□□ -0.64
TCF4-260ENST00000627685 ESCO1Q5FWF5 840 aa11.08□□□□□ -0.64
TCF4-260ENST00000627685 WDR70Q9NW82 654 aa11.08□□□□□ -0.64
TCF4-260ENST00000627685 ITSN1Q15811 1721 aa11.08□□□□□ -0.64
TCF4-260ENST00000627685 BCL9LQ86UU0 1499 aa11.07□□□□□ -0.64
TCF4-260ENST00000627685 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
TCF4-260ENST00000627685 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
TCF4-260ENST00000627685 SLIT2O94813 1529 aa11.07□□□□□ -0.64
TCF4-260ENST00000627685 SSH2Q76I76 1423 aa11.07□□□□□ -0.64
TCF4-260ENST00000627685 NRAPQ86VF7 1730 aa11.06□□□□□ -0.64
TCF4-260ENST00000627685 PHRF1Q9P1Y6 1649 aaKnown RBP11.06□□□□□ -0.64
TCF4-260ENST00000627685 SBNO2Q9Y2G9 1366 aa11.06□□□□□ -0.64
TCF4-260ENST00000627685 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.06□□□□□ -0.64
TCF4-260ENST00000627685 RGS12O14924 1447 aa11.05□□□□□ -0.64
TCF4-260ENST00000627685 CDK12Q9NYV4 1490 aaPredicted RBP11.05□□□□□ -0.64
TCF4-260ENST00000627685 EIF3AQ14152 1382 aaKnown RBP11.04□□□□□ -0.64
TCF4-260ENST00000627685 GLI3P10071 1580 aa11.04□□□□□ -0.64
TCF4-260ENST00000627685 ATRNO75882 1429 aa11.04□□□□□ -0.64
TCF4-260ENST00000627685 NEUROD1Q13562 356 aa11.04□□□□□ -0.64
TCF4-260ENST00000627685 POGKQ9P215 609 aa11.04□□□□□ -0.64
TCF4-260ENST00000627685 CD163L1Q9NR16 1453 aa11.04□□□□□ -0.64
TCF4-260ENST00000627685 PLCH1Q4KWH8 1693 aa11.04□□□□□ -0.64
TCF4-260ENST00000627685 CENPJQ9HC77 1338 aaPredicted RBP11.04□□□□□ -0.64
TCF4-260ENST00000627685 ZNF772Q68DY9 489 aaPredicted RBP11.03□□□□□ -0.64
TCF4-260ENST00000627685 FNBP4Q8N3X1 1017 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms