RNA–Protein interactions for RNA: ENST00000626425.2

TCF4-252, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-252ENST00000626425 C8orf37Q96NL8 207 aa11.39□□□□□ -0.59
TCF4-252ENST00000626425 FMN2Q9NZ56 1722 aa11.39□□□□□ -0.59
TCF4-252ENST00000626425 FOXO3O43524 673 aa11.38□□□□□ -0.59
TCF4-252ENST00000626425 CFAP70Q5T0N1 1121 aa11.38□□□□□ -0.59
TCF4-252ENST00000626425 PAXIP1Q6ZW49 1069 aaPredicted RBP11.38□□□□□ -0.59
TCF4-252ENST00000626425 FNBP4Q8N3X1 1017 aaPredicted RBP11.38□□□□□ -0.59
TCF4-252ENST00000626425 STAC3Q96MF2 364 aa11.38□□□□□ -0.59
TCF4-252ENST00000626425 CFAP44Q96MT7 982 aa11.38□□□□□ -0.59
TCF4-252ENST00000626425 QTRT2Q9H974 415 aaKnown RBP11.38□□□□□ -0.59
TCF4-252ENST00000626425 DLC1Q96QB1 1528 aa11.38□□□□□ -0.59
TCF4-252ENST00000626425 RBM6P78332 1123 aaKnown RBP11.37□□□□□ -0.59
TCF4-252ENST00000626425 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
TCF4-252ENST00000626425 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
TCF4-252ENST00000626425 KIF1AQ12756 1690 aa11.36□□□□□ -0.59
TCF4-252ENST00000626425 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
TCF4-252ENST00000626425 ADGRB1O14514 1584 aa11.36□□□□□ -0.59
TCF4-252ENST00000626425 RIMBP2O15034 1052 aa11.35□□□□□ -0.59
TCF4-252ENST00000626425 GPHNQ9NQX3 736 aaPredicted RBP11.35□□□□□ -0.59
TCF4-252ENST00000626425 MARF1Q9Y4F3 1742 aaKnown RBP11.35□□□□□ -0.59
TCF4-252ENST00000626425 NUTM2FA1L443 756 aa11.34□□□□□ -0.59
TCF4-252ENST00000626425 MARVELD3Q96A59 401 aa11.34□□□□□ -0.59
TCF4-252ENST00000626425 PRAM1Q96QH2 718 aa11.34□□□□□ -0.59
TCF4-252ENST00000626425 USP21Q9UK80 565 aa11.34□□□□□ -0.59
TCF4-252ENST00000626425 RGS12O14924 1447 aa11.34□□□□□ -0.59
TCF4-252ENST00000626425 SPATA31A3Q5VYP0 1347 aa11.34□□□□□ -0.59
TCF4-252ENST00000626425 RGPD8O14715 1765 aaPredicted RBP11.33□□□□□ -0.59
TCF4-252ENST00000626425 ADGRB2O60241 1585 aa11.33□□□□□ -0.6
TCF4-252ENST00000626425 XPCQ01831 940 aaPredicted RBP11.33□□□□□ -0.6
TCF4-252ENST00000626425 TRPC5Q9UL62 973 aaPredicted RBP11.33□□□□□ -0.6
TCF4-252ENST00000626425 ATRNO75882 1429 aa11.33□□□□□ -0.6
TCF4-252ENST00000626425 BCL9LQ86UU0 1499 aa11.32□□□□□ -0.6
TCF4-252ENST00000626425 KRT28Q7Z3Y7 464 aa11.32□□□□□ -0.6
TCF4-252ENST00000626425 DCAF11Q8TEB1 546 aa11.32□□□□□ -0.6
TCF4-252ENST00000626425 ANKARQ7Z5J8 1434 aa11.32□□□□□ -0.6
TCF4-252ENST00000626425 PSME1Q06323 249 aa11.31□□□□□ -0.6
TCF4-252ENST00000626425 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
TCF4-252ENST00000626425 SBNO1A3KN83 1393 aa11.3□□□□□ -0.6
TCF4-252ENST00000626425 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.3□□□□□ -0.6
TCF4-252ENST00000626425 TNS3Q68CZ2 1445 aa11.3□□□□□ -0.6
TCF4-252ENST00000626425 PDE4AP27815 886 aa11.3□□□□□ -0.6
TCF4-252ENST00000626425 DSG2Q14126 1118 aa11.3□□□□□ -0.6
TCF4-252ENST00000626425 PLPP6Q8IY26 295 aa11.3□□□□□ -0.6
TCF4-252ENST00000626425 CRISPLD2Q9H0B8 497 aa11.3□□□□□ -0.6
TCF4-252ENST00000626425 POGKQ9P215 609 aa11.3□□□□□ -0.6
TCF4-252ENST00000626425 FOXK1P85037 733 aa11.29□□□□□ -0.6
TCF4-252ENST00000626425 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
TCF4-252ENST00000626425 TRAK1Q9UPV9 953 aa11.29□□□□□ -0.6
TCF4-252ENST00000626425 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
TCF4-252ENST00000626425 SLIT2O94813 1529 aa11.29□□□□□ -0.6
TCF4-252ENST00000626425 EIF3AQ14152 1382 aaKnown RBP11.28□□□□□ -0.6
TCF4-252ENST00000626425 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
TCF4-252ENST00000626425 EMP3P54852 163 aa11.28□□□□□ -0.6
TCF4-252ENST00000626425 LARP6Q9BRS8 491 aaKnown RBP11.28□□□□□ -0.6
TCF4-252ENST00000626425 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
TCF4-252ENST00000626425 ARHGEF10O15013 1369 aa11.28□□□□□ -0.6
TCF4-252ENST00000626425 TULP4Q9NRJ4 1543 aa11.27□□□□□ -0.61
TCF4-252ENST00000626425 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
TCF4-252ENST00000626425 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.61
TCF4-252ENST00000626425 GJD4Q96KN9 370 aaPredicted RBP11.27□□□□□ -0.61
TCF4-252ENST00000626425 ATAD2Q6PL18 1390 aa11.27□□□□□ -0.61
TCF4-252ENST00000626425 WASLO00401 505 aaPredicted RBP11.26□□□□□ -0.61
TCF4-252ENST00000626425 ARHGEF28Q8N1W1 1705 aaKnown RBP11.26□□□□□ -0.61
TCF4-252ENST00000626425 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
TCF4-252ENST00000626425 KIAA1210Q9ULL0 1709 aa11.26□□□□□ -0.61
TCF4-252ENST00000626425 GPR153Q6NV75 609 aa11.25□□□□□ -0.61
TCF4-252ENST00000626425 PMFBP1Q8TBY8 1022 aa11.25□□□□□ -0.61
TCF4-252ENST00000626425 HIRIP3Q9BW71 556 aaPredicted RBP11.25□□□□□ -0.61
TCF4-252ENST00000626425 ABCA3Q99758 1704 aa11.25□□□□□ -0.61
TCF4-252ENST00000626425 MINK1Q8N4C8 1332 aaPredicted RBP11.25□□□□□ -0.61
TCF4-252ENST00000626425 PRR36Q9H6K5 1346 aa11.25□□□□□ -0.61
TCF4-252ENST00000626425 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
TCF4-252ENST00000626425 NWD2Q9ULI1 1742 aa11.24□□□□□ -0.61
TCF4-252ENST00000626425 PPP1R15BQ5SWA1 713 aa11.24□□□□□ -0.61
TCF4-252ENST00000626425 RALGAPBQ86X10 1494 aa11.24□□□□□ -0.61
TCF4-252ENST00000626425 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
TCF4-252ENST00000626425 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.612e-6■■■□□ 17.4
TCF4-252ENST00000626425 GPRASP1Q5JY77 1395 aa11.23□□□□□ -0.61
TCF4-252ENST00000626425 GLI3P10071 1580 aa11.23□□□□□ -0.61
TCF4-252ENST00000626425 SLC34A2O95436 690 aa11.22□□□□□ -0.61
TCF4-252ENST00000626425 ATP7BP35670 1465 aa11.22□□□□□ -0.61
TCF4-252ENST00000626425 HAP1P54257 671 aaPredicted RBP11.22□□□□□ -0.61
TCF4-252ENST00000626425 ITSN1Q15811 1721 aa11.22□□□□□ -0.61
TCF4-252ENST00000626425 VPS72Q15906 364 aa11.22□□□□□ -0.61
TCF4-252ENST00000626425 PLCH1Q4KWH8 1693 aa11.22□□□□□ -0.61
TCF4-252ENST00000626425 CCDC125Q86Z20 511 aa11.22□□□□□ -0.61
TCF4-252ENST00000626425 CABLES1Q8TDN4 633 aa11.22□□□□□ -0.61
TCF4-252ENST00000626425 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
TCF4-252ENST00000626425 FAM83GA6ND36 823 aa11.21□□□□□ -0.61
TCF4-252ENST00000626425 ONECUT3O60422 494 aaPredicted RBP11.21□□□□□ -0.61
TCF4-252ENST00000626425 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
TCF4-252ENST00000626425 ERBB3P21860 1342 aa11.2□□□□□ -0.62
TCF4-252ENST00000626425 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
TCF4-252ENST00000626425 NUDT16Q96DE0 195 aaKnown RBP11.2□□□□□ -0.62
TCF4-252ENST00000626425 CRYBG1Q9Y4K1 1723 aa11.2□□□□□ -0.62
TCF4-252ENST00000626425 POLR3AO14802 1390 aaPredicted RBP11.19□□□□□ -0.62
TCF4-252ENST00000626425 NGDNQ8NEJ9 315 aaKnown RBP11.19□□□□□ -0.62
TCF4-252ENST00000626425 CDK19Q9BWU1 502 aa11.19□□□□□ -0.62
TCF4-252ENST00000626425 COL14A1Q05707 1796 aaKnown RBP11.18□□□□□ -0.62
TCF4-252ENST00000626425 NRAPQ86VF7 1730 aa11.18□□□□□ -0.62
TCF4-252ENST00000626425 TOPAZ1Q8N9V7 1692 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms