RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 DOK7Q18PE1 504 aa5.33□□□□□ -1.56
PTP4A1-205ENST00000626021 POGKQ9P215 609 aa5.33□□□□□ -1.56
PTP4A1-205ENST00000626021 GOLGA6L3A6NEY3 463 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 E9PSI1 815 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 RGS3P49796 1198 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 WDR43Q15061 677 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 CC2D1BQ5T0F9 858 aaKnown RBP5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 C3P01024 1663 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 AKAP12Q02952 1782 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 DLC1Q96QB1 1528 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 TULP4Q9NRJ4 1543 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 XRCC6P12956 609 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 NBPF1Q3BBV0 1214 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 CDCA8Q53HL2 280 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 VARS2Q5ST30 1063 aaKnown RBP5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 PMFBP1Q8TBY8 1022 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 PKNOX2Q96KN3 472 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 RPGRIP1LQ68CZ1 1315 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 ITSN1Q15811 1721 aa5.32□□□□□ -1.56
PTP4A1-205ENST00000626021 IGHDP01880 384 aa5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 MRE11P49959 708 aa5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 TBC1D32Q96NH3 1257 aa5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 MON2Q7Z3U7 1717 aa5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 SLC24A1O60721 1099 aa5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 HSP90AA1P07900 732 aaKnown RBP5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 CHRM1P11229 460 aaPredicted RBP5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 MCM4P33991 863 aa5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 AMER1Q5JTC6 1135 aaPredicted RBP5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 CLUAP1Q96AJ1 413 aa5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 PNNQ9H307 717 aaKnown RBP5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 UPF2Q9HAU5 1272 aaKnown RBP5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 ALKQ9UM73 1620 aa5.31□□□□□ -1.56
PTP4A1-205ENST00000626021 CENPJQ9HC77 1338 aaPredicted RBP5.3□□□□□ -1.56
PTP4A1-205ENST00000626021 RIMBP2O15034 1052 aa5.3□□□□□ -1.56
PTP4A1-205ENST00000626021 HSP90AA2PQ14568 343 aaPredicted RBP5.3□□□□□ -1.56
PTP4A1-205ENST00000626021 RGL3Q3MIN7 710 aa5.3□□□□□ -1.56
PTP4A1-205ENST00000626021 CHMP5Q9NZZ3 219 aa5.3□□□□□ -1.56
PTP4A1-205ENST00000626021 KNSTRNQ9Y448 316 aa5.3□□□□□ -1.56
PTP4A1-205ENST00000626021 TOPAZ1Q8N9V7 1692 aa5.3□□□□□ -1.56
PTP4A1-205ENST00000626021 ZNF142P52746 1687 aaPredicted RBP5.3□□□□□ -1.56
PTP4A1-205ENST00000626021 PTPRMP28827 1452 aa5.3□□□□□ -1.56
PTP4A1-205ENST00000626021 PTMSP20962 102 aa5.29□□□□□ -1.56
PTP4A1-205ENST00000626021 TBC1D2Q9BYX2 928 aa5.29□□□□□ -1.56
PTP4A1-205ENST00000626021 CPS1P31327 1500 aa5.29□□□□□ -1.56
PTP4A1-205ENST00000626021 RAPGEF3O95398 923 aa5.29□□□□□ -1.56
PTP4A1-205ENST00000626021 TPM2P07951 284 aa5.29□□□□□ -1.56
PTP4A1-205ENST00000626021 IFFO2Q5TF58 517 aa5.29□□□□□ -1.56
PTP4A1-205ENST00000626021 RASEFQ8IZ41 740 aa5.29□□□□□ -1.56
PTP4A1-205ENST00000626021 CIZ1Q9ULV3 898 aaPredicted RBP5.29□□□□□ -1.56
PTP4A1-205ENST00000626021 ADGRB2O60241 1585 aa5.29□□□□□ -1.56
PTP4A1-205ENST00000626021 A2ML1A8K2U0 1454 aa5.29□□□□□ -1.56
PTP4A1-205ENST00000626021 CYB5RLQ6IPT4 315 aa5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 ADGRF5Q8IZF2 1346 aa5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 DDX11L8A8MPP1 907 aa5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 TRAK2O60296 914 aa5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 BCAR3O75815 825 aa5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 TERF1P54274 439 aa5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 ZNF467Q7Z7K2 595 aaPredicted RBP5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 IFNL1Q8IU54 200 aa5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 NAP1L5Q96NT1 182 aaPredicted RBP5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 SLKQ9H2G2 1235 aaPredicted RBP5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 MYH16Q9H6N6 1097 aa5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 ZSWIM6Q9HCJ5 1215 aa5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 POLR3AO14802 1390 aaPredicted RBP5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 NCOA3Q9Y6Q9 1424 aa5.28□□□□□ -1.56
PTP4A1-205ENST00000626021 ZMYND15Q9H091 742 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 RWDD1Q9H446 243 aaPredicted RBP5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 GRPEL1Q9HAV7 217 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 NRKQ7Z2Y5 1582 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 ESPNB1AK53 854 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 APAF1O14727 1248 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 FAM69CQ0P6D2 419 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 SKOR2Q2VWA4 1001 aaPredicted RBP5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 ANKRD13DQ6ZTN6 518 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 SNX21Q969T3 373 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 PDCL3Q9H2J4 239 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 C14orf93Q9H972 538 aaKnown RBP5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 SLC52A1Q9NWF4 448 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 PDZRN3Q9UPQ7 1066 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 DIP2AQ14689 1571 aa5.27□□□□□ -1.57
PTP4A1-205ENST00000626021 DDIT3P35638 169 aa5.26□□□□□ -1.57
PTP4A1-205ENST00000626021 USP54Q70EL1 1684 aa5.26□□□□□ -1.57
PTP4A1-205ENST00000626021 WDR63Q8IWG1 891 aa5.26□□□□□ -1.57
PTP4A1-205ENST00000626021 NALCNQ8IZF0 1738 aa5.26□□□□□ -1.57
PTP4A1-205ENST00000626021 XRN1Q8IZH2 1706 aaKnown RBP5.26□□□□□ -1.57
PTP4A1-205ENST00000626021 VSIG10Q8N0Z9 540 aa5.26□□□□□ -1.57
PTP4A1-205ENST00000626021 FMN2Q9NZ56 1722 aa5.26□□□□□ -1.57
PTP4A1-205ENST00000626021 MED14O60244 1454 aa5.26□□□□□ -1.57
PTP4A1-205ENST00000626021 CCDC27Q2M243 656 aa5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 PDCD7Q8N8D1 485 aaKnown RBP5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 PUS7Q96PZ0 661 aaKnown RBP5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 CDC42BPGQ6DT37 1551 aa5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 TECPR2O15040 1411 aa5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 CT47B1P0C2W7 299 aaPredicted RBP5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 RARSP54136 660 aaKnown RBP5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 GGT6Q6P531 493 aa5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 WWC1Q8IX03 1113 aa5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 C22orf23Q9BZE7 217 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms