RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ZBTB7CA1YPR0 619 aa19.25■□□□□ 0.67
SNRPA1-216ENST00000626000 SOX12O15370 315 aa19.25■□□□□ 0.67
SNRPA1-216ENST00000626000 ONECUT3O60422 494 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-216ENST00000626000 CARD14Q9BXL6 1004 aa19.25■□□□□ 0.67
SNRPA1-216ENST00000626000 STRN4Q9NRL3 753 aa19.25■□□□□ 0.67
SNRPA1-216ENST00000626000 CRB1P82279 1406 aa19.25■□□□□ 0.67
SNRPA1-216ENST00000626000 SPATA31A1Q5TZJ5 1347 aa19.25■□□□□ 0.67
SNRPA1-216ENST00000626000 RTL1A6NKG5 1358 aa19.24■□□□□ 0.67
SNRPA1-216ENST00000626000 PANK3Q9H999 370 aa19.23■□□□□ 0.67
SNRPA1-216ENST00000626000 ZRANB1Q9UGI0 708 aa19.23■□□□□ 0.67
SNRPA1-216ENST00000626000 WDR17Q8IZU2 1322 aa19.23■□□□□ 0.67
SNRPA1-216ENST00000626000 ANKRD26Q9UPS8 1709 aa19.22■□□□□ 0.67
SNRPA1-216ENST00000626000 CCDC7Q96M83 1385 aa19.22■□□□□ 0.67
SNRPA1-216ENST00000626000 BARGINQ6ZT62 677 aa19.22■□□□□ 0.67
SNRPA1-216ENST00000626000 GGNBP2Q9H3C7 697 aa19.22■□□□□ 0.67
SNRPA1-216ENST00000626000 FAM208AQ9UK61 1670 aaKnown RBP19.21■□□□□ 0.67
SNRPA1-216ENST00000626000 C11orf95C9JLR9 678 aaPredicted RBP19.21■□□□□ 0.67
SNRPA1-216ENST00000626000 TCP11L2Q8N4U5 519 aa19.21■□□□□ 0.67
SNRPA1-216ENST00000626000 KNSTRNQ9Y448 316 aa19.21■□□□□ 0.67
SNRPA1-216ENST00000626000 CDCA7Q9BWT1 371 aaPredicted RBP19.2■□□□□ 0.66
SNRPA1-216ENST00000626000 A0A0G2JS52 829 aa19.19■□□□□ 0.66
SNRPA1-216ENST00000626000 CSB-PGBD3P0DP91 1061 aa19.19■□□□□ 0.66
SNRPA1-216ENST00000626000 MYT1Q01538 1121 aa19.19■□□□□ 0.66
SNRPA1-216ENST00000626000 LARP1Q6PKG0 1096 aaKnown RBP19.19■□□□□ 0.66
SNRPA1-216ENST00000626000 TOM1L2Q6ZVM7 507 aa19.19■□□□□ 0.66
SNRPA1-216ENST00000626000 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
SNRPA1-216ENST00000626000 THSD7AQ9UPZ6 1657 aa19.19■□□□□ 0.66
SNRPA1-216ENST00000626000 AMPHP49418 695 aa19.18■□□□□ 0.66
SNRPA1-216ENST00000626000 FAM98CQ17RN3 349 aaKnown RBP19.18■□□□□ 0.66
SNRPA1-216ENST00000626000 IP6K1Q92551 441 aa19.18■□□□□ 0.66
SNRPA1-216ENST00000626000 ERBB3P21860 1342 aa19.18■□□□□ 0.66
SNRPA1-216ENST00000626000 SMG6Q86US8 1419 aaKnown RBP19.17■□□□□ 0.66
SNRPA1-216ENST00000626000 RGPD5Q99666 1765 aa19.17■□□□□ 0.66
SNRPA1-216ENST00000626000 CARD10Q9BWT7 1032 aa19.17■□□□□ 0.66
SNRPA1-216ENST00000626000 MAP3K19Q56UN5 1328 aa19.17■□□□□ 0.66
SNRPA1-216ENST00000626000 AXIN2Q9Y2T1 843 aa19.16■□□□□ 0.66
SNRPA1-216ENST00000626000 WASHC2AQ641Q2 1341 aa19.16■□□□□ 0.66
SNRPA1-216ENST00000626000 FLT4P35916 1363 aa19.15■□□□□ 0.66
SNRPA1-216ENST00000626000 KRT27Q7Z3Y8 459 aa19.14■□□□□ 0.65
SNRPA1-216ENST00000626000 CCDC125Q86Z20 511 aa19.14■□□□□ 0.65
SNRPA1-216ENST00000626000 USP35Q9P2H5 1018 aa19.14■□□□□ 0.65
SNRPA1-216ENST00000626000 PARP4Q9UKK3 1724 aaKnown RBP19.14■□□□□ 0.65
SNRPA1-216ENST00000626000 HOXC9P31274 260 aa19.13■□□□□ 0.65
SNRPA1-216ENST00000626000 ANKRD24Q8TF21 1146 aa19.13■□□□□ 0.65
SNRPA1-216ENST00000626000 NPC1L1Q9UHC9 1359 aa19.13■□□□□ 0.65
SNRPA1-216ENST00000626000 BRWD3Q6RI45 1802 aa19.13■□□□□ 0.65
SNRPA1-216ENST00000626000 WNK3Q9BYP7 1800 aa19.12■□□□□ 0.65
SNRPA1-216ENST00000626000 INSRP06213 1382 aa19.12■□□□□ 0.65
SNRPA1-216ENST00000626000 PDE3BQ13370 1112 aa19.1■□□□□ 0.65
SNRPA1-216ENST00000626000 NLRP2Q9NX02 1062 aa19.1■□□□□ 0.65
SNRPA1-216ENST00000626000 RRS1Q15050 365 aaKnown RBP19.09■□□□□ 0.65
SNRPA1-216ENST00000626000 MORC1Q86VD1 984 aa19.09■□□□□ 0.65
SNRPA1-216ENST00000626000 MAP2P11137 1827 aaKnown RBP19.09■□□□□ 0.65
SNRPA1-216ENST00000626000 ADRA2BP18089 450 aa19.08■□□□□ 0.64
SNRPA1-216ENST00000626000 AMER1Q5JTC6 1135 aaPredicted RBP19.08■□□□□ 0.64
SNRPA1-216ENST00000626000 UPF1Q92900 1129 aaKnown RBP eCLIP19.08■□□□□ 0.64
SNRPA1-216ENST00000626000 PER1O15534 1290 aaPredicted RBP19.07■□□□□ 0.64
SNRPA1-216ENST00000626000 DDB1Q16531 1140 aa19.07■□□□□ 0.64
SNRPA1-216ENST00000626000 LRRC37A3O60309 1634 aa19.06■□□□□ 0.64
SNRPA1-216ENST00000626000 DISP2A7MBM2 1401 aa19.06■□□□□ 0.64
SNRPA1-216ENST00000626000 IL2RBP14784 551 aa19.05■□□□□ 0.64
SNRPA1-216ENST00000626000 FAM196AQ6ZSG2 479 aa19.05■□□□□ 0.64
SNRPA1-216ENST00000626000 PEAK1Q9H792 1746 aa19.05■□□□□ 0.64
SNRPA1-216ENST00000626000 SF3B2Q13435 895 aaKnown RBP19.04■□□□□ 0.64
SNRPA1-216ENST00000626000 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
SNRPA1-216ENST00000626000 TNS2Q63HR2 1409 aa19.03■□□□□ 0.64
SNRPA1-216ENST00000626000 PPM1GO15355 546 aaPredicted RBP19.03■□□□□ 0.64
SNRPA1-216ENST00000626000 LTV1Q96GA3 475 aaPredicted RBP19.03■□□□□ 0.64
SNRPA1-216ENST00000626000 EMILIN1Q9Y6C2 1016 aa19.03■□□□□ 0.64
SNRPA1-216ENST00000626000 OVOS2A0A0G2JMS6 1433 aa19.02■□□□□ 0.64
SNRPA1-216ENST00000626000 EXOC5O00471 708 aa19.02■□□□□ 0.64
SNRPA1-216ENST00000626000 FBLN1P23142 703 aa19.02■□□□□ 0.64
SNRPA1-216ENST00000626000 HSP90AB2PQ58FF8 381 aa19.02■□□□□ 0.64
SNRPA1-216ENST00000626000 PLEKHG2Q9H7P9 1386 aa19.02■□□□□ 0.64
SNRPA1-216ENST00000626000 RGPD1P0DJD0 1748 aa19.01■□□□□ 0.63
SNRPA1-216ENST00000626000 TNNT2P45379 298 aaPredicted RBP19.01■□□□□ 0.63
SNRPA1-216ENST00000626000 BCL9O00512 1426 aa19■□□□□ 0.63
SNRPA1-216ENST00000626000 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
SNRPA1-216ENST00000626000 EP400Q96L91 3159 aa19■□□□□ 0.63
SNRPA1-216ENST00000626000 RAPGEF4Q8WZA2 1011 aa18.99■□□□□ 0.63
SNRPA1-216ENST00000626000 CC2D1BQ5T0F9 858 aaKnown RBP18.97■□□□□ 0.63
SNRPA1-216ENST00000626000 NCAPD2Q15021 1401 aa18.97■□□□□ 0.63
SNRPA1-216ENST00000626000 NBPF6Q5VWK0 638 aa18.96■□□□□ 0.63
SNRPA1-216ENST00000626000 NBPF4Q96M43 638 aa18.96■□□□□ 0.63
SNRPA1-216ENST00000626000 RGPD2P0DJD1 1756 aa18.96■□□□□ 0.63
SNRPA1-216ENST00000626000 BAG6P46379 1132 aa18.95■□□□□ 0.62
SNRPA1-216ENST00000626000 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-216ENST00000626000 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
SNRPA1-216ENST00000626000 EIF4A2Q14240 407 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-216ENST00000626000 MTHFSP49914 203 aa18.91■□□□□ 0.62
SNRPA1-216ENST00000626000 MARCH10Q8NA82 808 aaPredicted RBP18.91■□□□□ 0.62
SNRPA1-216ENST00000626000 ZCRB1Q8TBF4 217 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-216ENST00000626000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.91■□□□□ 0.62
SNRPA1-216ENST00000626000 TNS1Q9HBL0 1735 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-216ENST00000626000 MEGF6O75095 1541 aa18.9■□□□□ 0.62
SNRPA1-216ENST00000626000 CFAP53Q96M91 514 aa18.9■□□□□ 0.62
SNRPA1-216ENST00000626000 EYA1Q99502 592 aa18.9■□□□□ 0.62
SNRPA1-216ENST00000626000 IGSF1Q8N6C5 1336 aa18.9■□□□□ 0.62
SNRPA1-216ENST00000626000 PCDH11XQ9BZA7 1347 aa18.9■□□□□ 0.62
SNRPA1-216ENST00000626000 PCDH11YQ9BZA8 1340 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms