RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ATP1B4Q9UN42 357 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-208ENST00000624953 SNRPBP14678 240 aaKnown RBP6.62□□□□□ -1.35
CDKL5-208ENST00000624953 POM121Q96HA1 1249 aa6.62□□□□□ -1.35
CDKL5-208ENST00000624953 HPS1Q92902 700 aa6.61□□□□□ -1.35
CDKL5-208ENST00000624953 GDPD2Q9HCC8 539 aa6.61□□□□□ -1.35
CDKL5-208ENST00000624953 CDV3Q9UKY7 258 aaKnown RBP6.61□□□□□ -1.35
CDKL5-208ENST00000624953 NR3C2P08235 984 aa6.6□□□□□ -1.35
CDKL5-208ENST00000624953 NR5A1Q13285 461 aa6.6□□□□□ -1.35
CDKL5-208ENST00000624953 CTC1Q2NKJ3 1217 aa6.6□□□□□ -1.35
CDKL5-208ENST00000624953 ATP13A2Q9NQ11 1180 aa6.6□□□□□ -1.35
CDKL5-208ENST00000624953 CC2D2AQ9P2K1 1620 aa6.59□□□□□ -1.35
CDKL5-208ENST00000624953 A6NJR5 290 aa6.59□□□□□ -1.35
CDKL5-208ENST00000624953 CHIC2Q9UKJ5 165 aa6.59□□□□□ -1.35
CDKL5-208ENST00000624953 MCCD1P59942 119 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-208ENST00000624953 MAGEB6P1A0A0J9YX57 407 aa6.57□□□□□ -1.36
CDKL5-208ENST00000624953 ALDH1A1P00352 501 aa6.57□□□□□ -1.36
CDKL5-208ENST00000624953 TIMP2P16035 220 aa6.57□□□□□ -1.36
CDKL5-208ENST00000624953 NNTQ13423 1086 aa6.57□□□□□ -1.36
CDKL5-208ENST00000624953 INTS6LQ5JSJ4 861 aaKnown RBP6.57□□□□□ -1.36
CDKL5-208ENST00000624953 PHTF2Q8N3S3 785 aa6.57□□□□□ -1.36
CDKL5-208ENST00000624953 WASHC4Q2M389 1173 aa6.56□□□□□ -1.36
CDKL5-208ENST00000624953 SEPT12Q8IYM1 358 aa6.56□□□□□ -1.36
CDKL5-208ENST00000624953 SLC10A4Q96EP9 437 aa6.56□□□□□ -1.36
CDKL5-208ENST00000624953 KCTD15Q96SI1 283 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-208ENST00000624953 CARD14Q9BXL6 1004 aa6.56□□□□□ -1.36
CDKL5-208ENST00000624953 AGERQ15109 404 aa6.55□□□□□ -1.36
CDKL5-208ENST00000624953 ZBTB33Q86T24 672 aa6.55□□□□□ -1.36
CDKL5-208ENST00000624953 CCDC125Q86Z20 511 aa6.55□□□□□ -1.36
CDKL5-208ENST00000624953 ADAMTS19Q8TE59 1207 aa6.55□□□□□ -1.36
CDKL5-208ENST00000624953 PRM3Q9NNZ6 103 aa6.55□□□□□ -1.36
CDKL5-208ENST00000624953 MYO15BQ96JP2 1530 aa6.55□□□□□ -1.36
CDKL5-208ENST00000624953 TERTO14746 1132 aaKnown RBP6.54□□□□□ -1.36
CDKL5-208ENST00000624953 WIPF1O43516 503 aa6.54□□□□□ -1.36
CDKL5-208ENST00000624953 FSHRP23945 695 aa6.54□□□□□ -1.36
CDKL5-208ENST00000624953 NBPF20Q3BBV1 942 aa6.54□□□□□ -1.36
CDKL5-208ENST00000624953 VASH1Q7L8A9 365 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-208ENST00000624953 TRIM47Q96LD4 638 aa6.54□□□□□ -1.36
CDKL5-208ENST00000624953 ALG2Q9H553 416 aa6.54□□□□□ -1.36
CDKL5-208ENST00000624953 LILRA1O75019 489 aa6.53□□□□□ -1.36
CDKL5-208ENST00000624953 SOX11P35716 441 aa6.53□□□□□ -1.36
CDKL5-208ENST00000624953 Q6ZVU0 165 aa6.53□□□□□ -1.36
CDKL5-208ENST00000624953 ZNF592Q92610 1267 aa6.53□□□□□ -1.36
CDKL5-208ENST00000624953 GIGYF1O75420 1035 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-208ENST00000624953 BMP1P13497 986 aa6.52□□□□□ -1.37
CDKL5-208ENST00000624953 UBTFP17480 764 aaKnown RBP6.52□□□□□ -1.37
CDKL5-208ENST00000624953 ABL2P42684 1182 aa6.52□□□□□ -1.37
CDKL5-208ENST00000624953 VAC14Q08AM6 782 aa6.52□□□□□ -1.37
CDKL5-208ENST00000624953 PPP1R26Q5T8A7 1209 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-208ENST00000624953 CCDC116Q8IYX3 515 aa6.52□□□□□ -1.37
CDKL5-208ENST00000624953 KDF1Q8NAX2 398 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-208ENST00000624953 ITPKCQ96DU7 683 aa6.52□□□□□ -1.37
CDKL5-208ENST00000624953 CEP126Q9P2H0 1117 aa6.52□□□□□ -1.37
CDKL5-208ENST00000624953 GTF3C3Q9Y5Q9 886 aa6.52□□□□□ -1.37
CDKL5-208ENST00000624953 WASF2Q9Y6W5 498 aa6.52□□□□□ -1.37
CDKL5-208ENST00000624953 TRIM46Q7Z4K8 759 aa6.51□□□□□ -1.37
CDKL5-208ENST00000624953 DZIP3Q86Y13 1208 aaKnown RBP6.51□□□□□ -1.37
CDKL5-208ENST00000624953 MEIOBQ8N635 442 aa6.51□□□□□ -1.37
CDKL5-208ENST00000624953 CLUAP1Q96AJ1 413 aa6.51□□□□□ -1.37
CDKL5-208ENST00000624953 EMILIN1Q9Y6C2 1016 aa6.51□□□□□ -1.37
CDKL5-208ENST00000624953 EIF4G1Q04637 1599 aaKnown RBP6.5□□□□□ -1.37
CDKL5-208ENST00000624953 CECR2Q9BXF3 1484 aa6.5□□□□□ -1.37
CDKL5-208ENST00000624953 POM121CA8CG34 1229 aa6.5□□□□□ -1.37
CDKL5-208ENST00000624953 ERVH48-1M5A8F1 160 aa6.5□□□□□ -1.37
CDKL5-208ENST00000624953 VEGFBP49765 207 aa6.5□□□□□ -1.37
CDKL5-208ENST00000624953 WDR4P57081 412 aaKnown RBP6.5□□□□□ -1.37
CDKL5-208ENST00000624953 EIF4G2P78344 907 aaKnown RBP eCLIP6.5□□□□□ -1.37
CDKL5-208ENST00000624953 DHX9Q08211 1270 aaKnown RBP6.5□□□□□ -1.37
CDKL5-208ENST00000624953 PROSER2Q86WR7 435 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-208ENST00000624953 ZFAND3Q9H8U3 227 aa6.5□□□□□ -1.37
CDKL5-208ENST00000624953 ZNF330Q9Y3S2 320 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-208ENST00000624953 CAPN5O15484 640 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-208ENST00000624953 ZIC2O95409 532 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-208ENST00000624953 ERVK-9P63128 1117 aa6.49□□□□□ -1.37
CDKL5-208ENST00000624953 ARID5BQ14865 1188 aa6.49□□□□□ -1.37
CDKL5-208ENST00000624953 CCDC85AQ96PX6 553 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-208ENST00000624953 SENP2Q9HC62 589 aa6.49□□□□□ -1.37
CDKL5-208ENST00000624953 STK17AQ9UEE5 414 aa6.49□□□□□ -1.37
CDKL5-208ENST00000624953 PCDHB9Q9Y5E1 797 aa6.49□□□□□ -1.37
CDKL5-208ENST00000624953 RAD21O60216 631 aa6.48□□□□□ -1.37
CDKL5-208ENST00000624953 TRAK2O60296 914 aa6.48□□□□□ -1.37
CDKL5-208ENST00000624953 ADD1P35611 737 aaKnown RBP6.48□□□□□ -1.37
CDKL5-208ENST00000624953 ZNF784Q8NCA9 323 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-208ENST00000624953 NFATC2IPQ8NCF5 419 aa6.48□□□□□ -1.37
CDKL5-208ENST00000624953 UCN2Q96RP3 112 aa6.48□□□□□ -1.37
CDKL5-208ENST00000624953 INSM1Q01101 510 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-208ENST00000624953 SHROOM4Q9ULL8 1493 aa6.47□□□□□ -1.37
CDKL5-208ENST00000624953 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.38
CDKL5-208ENST00000624953 RNF20Q5VTR2 975 aa6.46□□□□□ -1.38
CDKL5-208ENST00000624953 MRPL14Q6P1L8 145 aaKnown RBP6.46□□□□□ -1.38
CDKL5-208ENST00000624953 TMPRSS4Q9NRS4 437 aa6.46□□□□□ -1.38
CDKL5-208ENST00000624953 SCRIBQ14160 1630 aa6.46□□□□□ -1.38
CDKL5-208ENST00000624953 GMPRP36959 345 aa6.45□□□□□ -1.38
CDKL5-208ENST00000624953 SCTRP47872 440 aa6.45□□□□□ -1.38
CDKL5-208ENST00000624953 TSGA10IPQ3SY00 556 aa6.45□□□□□ -1.38
CDKL5-208ENST00000624953 KIFC2Q96AC6 838 aa6.45□□□□□ -1.38
CDKL5-208ENST00000624953 OSBPL3Q9H4L5 887 aa6.45□□□□□ -1.38
CDKL5-208ENST00000624953 PGPEP1Q9NXJ5 209 aa6.45□□□□□ -1.38
CDKL5-208ENST00000624953 PIK3CDO00329 1044 aa6.44□□□□□ -1.38
CDKL5-208ENST00000624953 ADH1AP07327 375 aa6.44□□□□□ -1.38
CDKL5-208ENST00000624953 CBLBQ13191 982 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms